New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3655460 = | 52 (0.810) | 4 (0.070) | 4/234 | NT | 7.6% | coding (933/1620 nt) | PP_3220 | ABC transporter ATP‑binding protein |
? | NC_002947 | 3655526 = | 50 (0.850) | coding (867/1620 nt) | PP_3220 | ABC transporter ATP‑binding protein |
CCGCGCCGGCCTTCGTGCCACGGCGCAGGCCAGCCGCACCGCGGGGCCAGACGCCACTGCTGCGCCTGAGCCATGTCGGCAAACGGTTCGAGCTGCCCGGCAAAAACGAGCATTACACTGCCCTGCACGACCTGAGCCTTGAACTGCATGCCGGGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3655617‑3655460 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccgggcagCTCGAACCGTTTGCCGACATGGCTCAGGCGCAGCAGTGGCGTCTGGCCCCGCGGTGCGGCTGGCCTGCGCCGTGGCACGAAGGCCGGCGCGGCATCGAGCAGGGCGCGGGTGTAGGGTTGCCGGGCGCCCCAGAGGATCTG > NC_002947/3655526‑3655666 CCGCGCCGGCCTTCGTGCCACGGCGCAGGCCAGCCGCACCGCGGGGCCAGACGCCACTGCTGCGCCTGAGCCATGTCGGCAAACGGTTCGAGCTGCCCGGCAAAAACGAGCATTACACTGCCCTGCACGACCTGAGCCTTGAACTGCAT > 4:177448/1‑149 CGGCCTTCGTGCCACGGCGCAGGCCAGCCGCACCGCGGGGCCAGACGCCACTGCTGCGCCTGAGCCATGTCGGCAAACGGTTCGAGCTGCCCGGCAAAAACGAGCATTACACTGCCCTGCACGACCTGAGCCTTGAACTGCATGCCGGG < 2:221307/149‑1 CGGCCTTCGTGCCACGGCGCAGGCCAGCCGCACCGCGGGGCCAGACGCCACTGCTGCGCCTGAGCCATGTCGGCAAACGGTTCGAGCTGCCCGGCAAAAACGAGCATTACACTGCCCTGCACGACCTGAGCCTTGAACTGCATGCCGGG < 3:177448/149‑1 GGCCTTCGTGCCACGGCGCAGGCCAGCCGCACCGCGGGGCCAGACGCCACTGCTGCGCCTGAGCCATGTCGGCAAACGGTTCGAGCTGCCCGGCAAAAACGAGCATTACACTGCCCTGCACGACCTGAGCCTTGAACTGCATGCCGGGC < 5:164235/149‑1 GCCTTCGTGCCACGGCGCAGGCCAGCCGCACCGCGGGGCCAGACGCCACTGCTGCGCCTGAGCCATGTCGGCAAACGGTTCGAGCTGCCCGGCAAAAACGAGCATTACACTGCCCTGCACGACCTGAGCCTTGAACTGCATGCCGGG > 5:23936/1‑147 TGCCCGGCAAAAACGAGCATTACACTGCCCTGCACGACCTGAGCCTTGAACTGCATGCCGGGCAGCTCGAACCGTTTGCCGACATGGCTCAGGCGCAGCAGTGGCGTCTGGCCCCGCGGTGCGGCTGGCCTGCGCCGTGGC > 1:355542/1‑141 TGCCCGGCAAAAACGAGCATTACACTGCCCTGCACGACCTGAGCCTTGAACTGCATGCCGGGCAGCTCGAACCGTTTGCCGACATGGCTCAGGCGCAGCAGTGGCGTCTGGCCCCGCGGTGCGGCTGGCCTGCGCCGTGGC < 2:355542/141‑1 CCCGGCAAAAACGAGCATTACACTGCCCTGCACGACCTGAGCCTTGAACTGCATGCCGGGCAGCTCGAACCGTTTGCCGACATGGCTCAGGCGCAGCAGTGGCGTCTGGCCCCGCGGTGCG < 5:58976/121‑1 CCCGGCAAAAACGAGCATTACACTGCCCTGCACGACCTGAGCCTTGAACTGCATGCCGGGCAGCTCGAACCGTTTGCCGACATGGCTCAGGCGCAGCAGTGGCGTCTGGCCCCGCGGTGCG > 6:58976/1‑121 CCGGGCAGCTCGAACCGTTTGCCGACATGGCTCAGGCGCAGCAGTGGCGTCTGGCCCCGCGGTGCGGCTGGCCTGCGCCGTGGCACGAAGGCCGGCGCGGCATCGAGCAGGGCGCGGGTGTAGGGTTGCCGGGCGCCCCAGAGGATCTG < 1:171702/149‑1 GCAGCTCGAACCGTTTGCCGACATGGCTCAGGCGCAGCAGTGGCGTCTGGCCCCGCGGTGCGGCTGGCCTGCGCCGTGGCACGAAGGCCGGCGCGGCATCGAGCAGGGCGCGGGTGTAG < 3:359838/119‑1 GCAGCTCGAACCGTTTGCCGACATGGCTCAGGCGCAGCAGTGGCGTCTGGCCCCGCGGTGCGGCTGGCCTGCGCCGTGGCACGAAGGCCGGCGCGGCATCGAGCAGGGCGCGGGTGTAG > 4:359838/1‑119 CCGCGCCGGCCTTCGTGCCACGGCGCAGGCCAGCCGCACCGCGGGGCCAGACGCCACTGCTGCGCCTGAGCCATGTCGGCAAACGGTTCGAGCTGCCCGGCAAAAACGAGCATTACACTGCCCTGCACGACCTGAGCCTTGAACTGCATGCCGGGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3655617‑3655460 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccgggcagCTCGAACCGTTTGCCGACATGGCTCAGGCGCAGCAGTGGCGTCTGGCCCCGCGGTGCGGCTGGCCTGCGCCGTGGCACGAAGGCCGGCGCGGCATCGAGCAGGGCGCGGGTGTAGGGTTGCCGGGCGCCCCAGAGGATCTG > NC_002947/3655526‑3655666 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |