| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3748318 = | 55 (0.860) | 6 (0.100) | 6/244 | NT | 10.1% | coding (443/1746 nt) | kefB‑II | glutathione‑regulated potassium/H+ antiporter |
| ? | NC_002947 | 3748348 = | 54 (0.880) | coding (413/1746 nt) | kefB‑II | glutathione‑regulated potassium/H+ antiporter | |||||
TTGATCTGTGCCGTTCTGCTCACCGTCGTCGGCAAGGCCTTTGGTTTCCCTTGGCAGGTGTCATTCGTCTGCGCGGCCGGTTTTGTACTCACATCCACTGCCATCGTCATGCAAGTTCTCTCGGAGCGGGGTGACTTGACCGAGCCGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3748466‑3748318‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgagAGAACTTGCATGACGATGGCAGTGGATGTGAGTACAAAACCGGCCGCGCAGACGAATGACACCTGCCAAGGGAAACCAAAGGCCTTGCCGACGACGGTGAGCAGAACGGCACAGATCAACACCTGCAGGCTGCCCAGCCCAAAG > NC_002947/3748348‑3748491 TTGATCTGTGCCGTTCTGCTCACCGTCGTCGGCAAGGCCTTTGGTTTCCCTTGGCAGGTGTCATTCGTCTGCGCGGCCGGTTTTGTACTCACATCCACTGCCATCGTCATGCAAGTTCTCTCGGAGCGGGGTGACTTGACCGAGCCGA < 2:121681/148‑1 AAGTTCTCTCGGAGCGGGGTGACTTGACCGAGCCGAGAGAACTTGCATGACGATGGCAGTGGATGTGAGTACAAAACCGGCCGCGCAGACGAATGACACCTGCCAAGGGAAACCAAAGGCCTTGC > 5:114890/1‑125 AAGTTCTCTCGGAGCGGGGTGACTTGACCGAGCCGAGAGAACTTGCATGACGATGGCAGTGGATGTGAGTACAAAACCGGCCGCGCAGACGAATGACACCTGCCAAGGGAAACCAAAGGCCTTGC < 6:114890/125‑1 TCTCGGAGCGGGGTGACTTGACCGAGCCGAGAGAACTTGCATGACGATGGCAGTGGATGTGAGTACAAAACCGGCCGCGCAGACGAATGACACCTGCCAAGGGAAACCAAAGGCCTTGCCGACGACGGTGAGCAGAACGGCACAGATC > 3:271617/1‑148 CTCGGAGCGGGGTGACTTGACCGAGCCGAGAGAACTTGCATGACGATGGCAGTGGATGTGAGTACAAAACCGGCCGCGCAGACGAATGACACCTGCCAAGGGAAA < 1:70659/105‑1 CTCGGAGCGGGGTGACTTGACCGAGCCGAGAGAACTTGCATGACGATGGCAGTGGATGTGAGTACAAAACCGGCCGCGCAGACGAATGACACCTGCCAAGGGAAA > 2:70659/1‑105 TGACTTGACCGAGCCGAGAGAACTTGCATGACGATGGCAGTGGATGTGAGTACAAAACCGGCCGCGCAGACGAATGACACCTGCCAAGGGAAACCAAAGGCCTTGCCGACGACGGTGAGCAGAACGGCACAGATCAACACCTGCAGGCT < 4:271617/149‑1 CGAGAGAACTTGCATGACGATGGCAGTGGATGTGAGTACAAAACCGGCCGCGCAGACGAATGACACCTGCCAAGGGAAACCAAAGGCCTTGCCGACGACGGTGAGCAGAACGGCACAGATCAACACCTGCAGGCTGCCCAGCCCAAAG < 3:3803/148‑1 TTGATCTGTGCCGTTCTGCTCACCGTCGTCGGCAAGGCCTTTGGTTTCCCTTGGCAGGTGTCATTCGTCTGCGCGGCCGGTTTTGTACTCACATCCACTGCCATCGTCATGCAAGTTCTCTCGGAGCGGGGTGACTTGACCGAGCCGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3748466‑3748318‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgagAGAACTTGCATGACGATGGCAGTGGATGTGAGTACAAAACCGGCCGCGCAGACGAATGACACCTGCCAAGGGAAACCAAAGGCCTTGCCGACGACGGTGAGCAGAACGGCACAGATCAACACCTGCAGGCTGCCCAGCCCAAAG > NC_002947/3748348‑3748491 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |