| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3841612 | 48 (0.750) | 5 (0.080) | 5/240 | NT | 9.0% | coding (1273/1317 nt) | PP_3391 | tartrate MFS transporter |
| ? | NC_002947 | = 3841638 | 56 (0.930) | coding (1247/1317 nt) | PP_3391 | tartrate MFS transporter | |||||
GACAGGCGCAGTAAAGCGCCGAGAGCACCAGCGATGCTCGCCGAAAGATCACGATCATTGGTATGCCTTGTGCTTATTCTTGTTGTTGTTCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3841461‑3841612‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcatgcTGTCAATCGCGCCGCTGATCCTGGTCGCATGCCTGGTGGTGATGCGTTACGTGCGCAACCCCAAAAGCTGATTGGCGCTGAGTCTTCGAACAACAACAAGAATAAGCACAAGGCATACCAATGATCGTGATCTTTCGGCGAGCATCGC < NC_002947/3841638‑3841491 GACAGGCGCAGTATAGCGCCGAGAGCACCAGCGATGCTCGCCGAAAGATCACGATCATTGGTATGCCTTGTGCTTATTCTTGTTGTTGTTCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCA > 4:215946/1‑149GACAGGCGCAGTATAGCGCCGAGAGCACCAGCGATGCTCGCCGAAAGATCACGATCATTGGTATGCCTTGTGCTTATTCTTGTTGTTGTTCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCA > 4:221478/1‑149 GCGCCGAGAGCACCAGCGATGCTCGCCGAAAGATCACGATCATTGGTATGCCTTGTGCTTATTCTTGTTGTTGTTCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGC < 1:119944/137‑1 GCGCCGAGAGCACCAGCGATGCTCGCCGAAAGATCACGATCATTGGTATGCCTTGTGCTTATTCTTGTTGTTGTTCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGC > 2:119944/1‑137 CTCGCCGAAAGATCACGATCATTGGTATGCCTTGTGCTTATTCTTGTTGTTGTTCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCTGTCAATCGCGCCGCTGATCCTGGTCGCATGCC < 3:140638/149‑1 ATCACGATCATTGGTATGCCTTGTGCTTATTCTTGTTGTTGTTCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCTGTCAATCGCGCCGCTGATCCTGGTCGCATGCCTGGT < 7:324187/142‑1 ATCACGATCATTGGTATGCCTTGTGCTTATTCTTGTTGTTGTTCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCTGTCAATCGCGCCGCTGATCCTGGTCGCATGCCTGGT > 8:324187/1‑142 GTTGTTCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGC < 3:20271/68‑1 GTTGTTCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGC > 4:20271/1‑68 CGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCTGTCAATCGCGCCGCTGATCCTGGTCGCATGCCTGG > 5:283017/1‑87 CGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCTGTCAATCGCGCCGCTGATCCTGGTCGCATGCCTGG < 6:283017/87‑1 CTGTCAATCGCGCCGCTGATCCTGGTCGCATGCCTGGTGGTGATGCGTTACGTGCGCAACCCCAAAAGCTGATTGGCGCTGAGTCTTCGAACAACAACAAGAATAAGCACAAGGCATACCAATGATCGTGATCTTTCGGCGAGCATCGC < 5:133211/149‑1 GACAGGCGCAGTAAAGCGCCGAGAGCACCAGCGATGCTCGCCGAAAGATCACGATCATTGGTATGCCTTGTGCTTATTCTTGTTGTTGTTCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3841461‑3841612‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcatgcTGTCAATCGCGCCGCTGATCCTGGTCGCATGCCTGGTGGTGATGCGTTACGTGCGCAACCCCAAAAGCTGATTGGCGCTGAGTCTTCGAACAACAACAAGAATAAGCACAAGGCATACCAATGATCGTGATCTTTCGGCGAGCATCGC < NC_002947/3841638‑3841491 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |