New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3953986 =	66 (1.030)	4 (0.060)	4/246	NT	5.5%	coding (537/1977 nt)	PP_5606	YVTN beta‑propeller repeat‑containing protein
	?	NC_002947	3954065 =	73 (1.180)					coding (458/1977 nt)	PP_5606	YVTN beta‑propeller repeat‑containing protein

CCGACGGTGTCGGTGGGGGGCGTGACCAGCACCATGGCGCGCATCGAGCTGCCAGGGCGGCCCATGGACTGGGCGGCCACCAGCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3954072‑3953986 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgacACCGTCGGGTCGATCACTGTCAGGCTGGCGTCATTGTTCAGCATCAGCAAGAAGTAGCTGTTCAGGTCGAGCAGCGGCCGGGCCCCGATGCTGCTCTTGAGAAACAGCGCGACCCGCGCCTTGCAGCTCTGCTCGCGGTCCCCGGCC  >  NC_002947/3954065‑3954211                                                                                                                                                                                                                                            CCGACGGTGTCGGTGGGGCGCGTGACCAGCACCATGGCGCGCATCGAGCTGCCAGGGCGGCCCATGGACTGGGCGGCAACCAGCGACACCGTCGGGTCGATAACTGTCACGCTGGCGTCAATG‑ACAGCATCAGCAAGAATTAGCTGTT                                                                                       >  6:178287/1‑148          TCGGTGGGGGGCGTGACCAGCACCATGGCGCGCATCGAGCTGCCAGGGCGGCCCATGGACTGGGCGGCCACCAGCGACACCGTCGGGTCGATCACTGTCAGGCTGGCGTCATTGTTCAGCATCAGCAAGAAGTAGCTGTTCAGGTCGAG                                                                              >  1:177885/1‑149                                CCATGGCGCGCATCGAGCTGCCAGGGCGGCCCATGGACTGGGCGGCCACCAGCGACACCGTCGGGTCGATCACTGTCAGGCTGGCGTCATTGTTCAGCATCAGCAAGAAGTAGCTGTTCAGGTCGAGCAGCGGCCGGGCCCCGATGCTG                                                        <  2:177885/149‑1                                            TCGAGCTGCCAGGGCGGCCCATGGACTGGGCGGCCACCAGCGACACCGTCGGGTCGATCACTGTCAGGCTGGCGTCATT‑TTGAGCATCAGCAAGAAGTAGCTGTTCAGGTCGTGCAGCGGCCGGGCCCCGATGCTGCTCTTGAGAAACA                                           <  5:178287/149‑1                                                                                      ACACCGTCGGGTCGATCACTGTCAGGCTGGCGTCATTGTTCAGCATCAGCAAGAAGTAGCTGTTCAGGTCGAGCAGCGGCCGGGCCCCGATGCTGCTCTTGAGAAACAGCGCGACCCGCGCCTTGCAGCTCTGCTCGCGGTCCCCGGCC  >  3:360890/1‑149                                                                                      ACACCGTCGGGTCGATCACTGTCAGGCTGGCGTCATTGTTCAGCATCAGCAAGAAGTAGCTGTTCAGGTCGAGCAGCGGCCGGGCCCCGATGCTGCTCTTGAGAAACAGCGCGACCCGCGCCTTGCAGCTCTGCTCGCGGTCCCCGGCC  <  4:209719/149‑1                                                                                                                                                                                                                                            CCGACGGTGTCGGTGGGGGGCGTGACCAGCACCATGGCGCGCATCGAGCTGCCAGGGCGGCCCATGGACTGGGCGGCCACCAGCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3954072‑3953986 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgacACCGTCGGGTCGATCACTGTCAGGCTGGCGTCATTGTTCAGCATCAGCAAGAAGTAGCTGTTCAGGTCGAGCAGCGGCCGGGCCCCGATGCTGCTCTTGAGAAACAGCGCGACCCGCGCCTTGCAGCTCTGCTCGCGGTCCCCGGCC  >  NC_002947/3954065‑3954211

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.