New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3971387 | NA (NA) | 6 (0.100) | 4/246 | NT | NA | coding (1306/1536 nt) | PP_3501 | transposase |
? | NC_002947 | = 3971438 | NA (NA) | coding (1357/1536 nt) | PP_3501 | transposase |
CCAATCCTCAAAACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACAGCCTGAAACGCTGGGTAGCGCTGACGCGCTACCTGGACGATGGGGCTGTGCCCATCGACAACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3971237‑3971387 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacaGCCAGTTCGAGCGCCCGAGTGCCCAGGGCCGTATCTGGTTCTCGACCTGGTTGTTGT < NC_002947/3971438‑3971382 CCAATCCTCAAAACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACAGCCTGAAACGCTGGGTAGCGCTGACGCGCTACCTGGACGATGGGGCTGTGCCCATCGACAA < 5:346742/149‑1 CAATCCTCAAAACACTGCATGAGTGGATGTTGGCCCAGCGCGACTTGGGGCCGATCGGATCTTCCACGGCTAAAGCCCTCTATTACAGCCTGAAACGCTGGGTAGCGCTGACGCGCTACCTGGACGATGGGGCTGTGCCCATCGACAA < 5:64669/148‑1 CAATCCTCAAAACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACAGCCTGAAACGCTGGGTAGCGCTGACGCGCTACCTGGACGATGGGGCTGTGCCCATCGACAAC < 6:264196/149‑1 AATCCTCAAAACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACAGCCTGAAACGCTGGGTAGCGCTGACGCGCTCCCTGGACGAAGGGCCTGTGCCCATCGACAAC > 2:195171/1‑148 AATCCTCAAAACACTGCATGACTGGATGTTGGCCCAGAGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACAGCCTGAAACGCTGGGTAGCGCTGACGCGCTACCTGGACGATGGGGCTGTGCCCATCGACAAC > 5:367631/1‑148 TGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACAGCCTGAAACGCTGGGTAGCGCTGACGCGCTACCTGGACGATGGGGCTGTGCCCATCGACAACAGCCAGTTCGAGCGCCCGAGTGCCCAGGGC > 2:307304/1‑149 CAACGGATCAGCCACGGCTAAAGCCCTCGATTACAGCCTGAAACGCTGGGTAGCGCTGACGCGCTACCTGGACGATGGGGCTGTGCCCATCGACAACAGCCAGTTCGAGCGCCCGAGTGCCCAGGGCCGTATCTGGTTCTCGACCTGGT > 1:102596/1‑149 CAACGGATCAGCCACAGCCAAAGCCCTCGACTACAGCCTGAAACGCTGGGTAGCGCTGACGCGCTACCTGGACGATGGATCTGTGCCCATCGACAACAACCAGTTCGAGCGCCCGAGTGCCCATGGCCGTATCTGGTTCTCGACCTGat > 4:3656/1‑147 GATCAGCCACGGCTAAAGCCCTCGATTACAGCCTGAAACGCTGGGTAGCGCTGACGCGCTACCTGGACGATGGGGCTGTGCCCATCGACAACAGCCAGTTCGAGCGCCCGAGTGCCCAGGGCCGTATCTGGTTCTCGACCTGGTTGTTG < 1:307304/149‑1 GATCAGCCACAGCCAAAGCCCTCGACTACAGCCTGAAACGCTGGGTAGCGCTGACGCGCTACCTGGACGATGGATCTGTGCCCATCGACAACAACCAGTTCGAGCGCCCGAGTGCCCATGGCCGTATCTGGTTCTCGACCTGATTGTTG < 3:3656/149‑1 ATCAGCCACGGCTAAAGCCCTCGATTACAGCCTGAAACGCTGGGTAGCGCTGACGCGCTACCTGGACGATGGGGCTGTGCCCATCGACAACAGCCAGTTCGAGCGCCCGAGTGCCCAGGGCCGTATCTGGTTCTCGACCTGGTTGTTGT < 2:102596/149‑1 CCAATCCTCAAAACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACAGCCTGAAACGCTGGGTAGCGCTGACGCGCTACCTGGACGATGGGGCTGTGCCCATCGACAACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3971237‑3971387 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacaGCCAGTTCGAGCGCCCGAGTGCCCAGGGCCGTATCTGGTTCTCGACCTGGTTGTTGT < NC_002947/3971438‑3971382 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |