New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4059604 = | 64 (1.000) | 3 (0.050) | 3/238 | NT | 5.2% | coding (1295/1638 nt) | pgm | phosphoglucomutase |
? | NC_002947 | 4059694 = | 49 (0.820) | coding (1205/1638 nt) | pgm | phosphoglucomutase |
GACGGTTCGCTCGGTTTTGGTGGCGAAGAAAGTGCAGGGGCTTCGTTCCTGCGTCGCGATGGCTCGGTGTGGGCCACCGACAAGGACGGGTTGATCCCGGCCTTGCTGGCCGCCGAAATGACCGCCCGTACCGGGCGTAACCCGAGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4059752‑4059604 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgagccaTCGCGACGCAGGAACGAAGCCCCTGCACTTTCTTCGCCACCAAAACCGAGCGAACCGTCGAACAGGCCCTGGGCGAAGAACTTGAAGCCCACCGGCACCTCATACAGATCGCGGCCCAGCCGTTGGGTAACGCGGTCGATCAGGCC > NC_002947/4059694‑4059839 GACGGTTCGCTCGGTTTTGGTGGCGAAGAAAGTGCAGGGGCTTCGTTCCTGCGTCGCGATGGCTCGGTGTGGGCCACCGACAAGGACGGGTTGATCCCGGCCTTGCTGGCCGCCGAAATGACCGCCCGTACCGGGCGTAACCCGAGC > 3:114824/1‑147 GACGGTTCGCTCGGTTTTGGTGGCGAAGAAAGTGCAGGGGCTTCGTTCCTGCGTCGCGATGGCTCGGTGTGGGCCACCGACAAGGACGGGTTGATCCCGGCCTTGCTGGCCGCCGAAATGACCGCCCGTACCGGGCGTAACCCGAGC > 4:282066/1‑147 GTCGCGATGGCTCGGTGTGGGCCACCGACAAGGCCGGGTTGATCCCGGCCTTGCTGGCCGCCGAAATGACCGCCCGTACCGGGCGTAACCCGAGCCATCGCGACGCAGGAACGAAGCCCCTGCACTTTCTTCGCCACCAAAACCGAGC > 4:373065/1‑148 GATGGCTCGGTGTGGGCCACCGACAAGGACGGGTTGATCCCGGCCTTGCTGGCCGCCGAAATGACCGCCCGTACCGGGCGTAACCCGAGCCATCGCGACGCAGGAACGAAGCCCCTGCACTTTCTTCGCCACCAAAACCGAGCGAACC > 6:30935/1‑148 GCTGGCCGCAGAAATGACCGCCCTTACCGGGCGTAACCCGAGCCATCGCGACGCAGGAACGAAGGCCCTGCACTTTCTTCGCCACCAAAACCGAGCGAACCGTCGAACAGGCCCTGGGCGAAGAACTTGAAGCCCACCGGCACCTCAT < 5:30935/148‑1 ACCCGAGCCATCGCGACGCAGGAACGAAGCCCCTGCACTTTCTTCGCCACCAAAACCGAGCGAACCGTCGAACAGGCCCTGGGCGAAGAACTTGAAGCCCACCGGCACCTCATACAGATCGCGGCCCAGCCGTTGTGTAACGCGGTCGA < 3:373065/149‑1 CGAGCCATCGCGACGCAGGAACGAAGCCCCTGCACTTTCTTCGCCACCAAAACCGAGCGAACCGTCGAACAGGCCCTGGGCGAAGAACTTGAAGCCCACCGGCAC < 3:262630/105‑1 CGAGCCATCGCGACGCAGGAACGAAGCCCCTGCACTTTCTTCGCCACCAAAACCGAGCGAACCGTCGAACAGGCCCTGGGCGAAGAACTTGAAGCCCACCGGCAC > 4:262630/1‑105 CCATCGCGACGCAGGAACGAAGCCCCTGCACTTTCTTCGCCACCAAAACCGAGCGAACCGTCGAACAGGCCCTGGGCGAAGAACTTGAAGCCCCCCGGCAGCTCATACAGATCGCGGCCCAGCCGTTGGGTAACGCGGGCGATCAGGCC > 4:350127/1‑149 GACGGTTCGCTCGGTTTTGGTGGCGAAGAAAGTGCAGGGGCTTCGTTCCTGCGTCGCGATGGCTCGGTGTGGGCCACCGACAAGGACGGGTTGATCCCGGCCTTGCTGGCCGCCGAAATGACCGCCCGTACCGGGCGTAACCCGAGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4059752‑4059604 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgagccaTCGCGACGCAGGAACGAAGCCCCTGCACTTTCTTCGCCACCAAAACCGAGCGAACCGTCGAACAGGCCCTGGGCGAAGAACTTGAAGCCCACCGGCACCTCATACAGATCGCGGCCCAGCCGTTGGGTAACGCGGTCGATCAGGCC > NC_002947/4059694‑4059839 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |