| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4095078 = | 66 (1.030) | 5 (0.080) | 5/244 | NT | 7.8% | coding (406/765 nt) | PP_3603 | GntR family transcriptional regulator |
| ? | NC_002947 | 4095123 = | 55 (0.890) | coding (361/765 nt) | PP_3603 | GntR family transcriptional regulator | |||||
ACCCTGCGCGAAGTGCTGGCGGTGCTGGAGTTGCGCATTGCCCTGGAGATCGAGTCGGCCGGGCTGGCAGCCCAGCGGCGAAGCGACGAAGCCCTGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4095177‑4095078‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgACTCGATCTCCAGGGCAATGCGCAACTCCAGCACCGCCAGCACTTCGCGCAGGGTGACCACGGTGGCCGGGTCGATACGGAAACCGCCCGTAGCCGGTGCATCCAG > NC_002947/4095123‑4095228 ACCCTGCGCGAAGTGCTGGCGGTGCTGGAGTTGCGCATTGCCCTGGAGATCGAGTCGGCCGGGCTGGCAGCCCAGCGGCGAAGCGACGAAGCCCTGGC > 7:358714/1‑98ACCCTGCGCGAAGTGCTGGCGGTGCTGGAGTTGCGCATTGCCCTGGAGATCGAGTCGGCCGGGCTGGCAGCCCAGCGGCGAAGCGACGAAGCCCTGGC < 8:358714/98‑1 TCGAGTCGGCCGGGCTGGCAGCCCAGCGGCGAAGCGACGAAGCCCTGGCCGACTCGATCTCCAGGGCAATGCGCAACTCCAGCACCGCCAGCACTTCGCGCAGGGTGACCACGGTGGCCGGGTCGATACGGAAACCGCCCGTAGCCGGT > 3:251087/1‑149 CGAGTCGGCCGGGCTGGCAGCCCAGCGGCGAAGCGACGAAGCCCTGGCCGACTCGATCTCCAGGGCAATGCGCAACTCCAGCACCGCCAGCACTTCGCGCAGGGTGACCACGGTGGCCG > 5:261035/1‑119 CGAGTCGGCCGGGCTGGCAGCCCAGCGGCGAAGCGACGAAGCCCTGGCCGACTCGATCTCCAGGGCAATGCGCAACTCCAGCACCGCCAGCACTTCGCGCAGGGTGACCACGGTGGCCG < 6:261035/119‑1 GGCCGGGCTGGCAGCCCAGCGGCGAAGCGACGAAGCCCTGGCCGACTCGATCTCCAGGGCAATGCGCAACTCCAGCACCGCCAGCACTTCGCGCAGGGTGACCACGGTGGCCGGGTCGATACGGAAACCGCCCGTAGCCGGTGCATC > 3:369599/1‑147 GCCGGGCTGGCAGCCCAGCGGCGAAGCGACGAAGCCCTGGCCGACTCGATCTCCAGGGCAATGCGCAACTCCAGCACCGCCAGCACTTCGCGCAGGGTGACCACGGTGGCCGGGTCGATACGGAAACCGCCCGTAGCCGGTGCATCCAG > 1:357440/1‑149 ACCCTGCGCGAAGTGCTGGCGGTGCTGGAGTTGCGCATTGCCCTGGAGATCGAGTCGGCCGGGCTGGCAGCCCAGCGGCGAAGCGACGAAGCCCTGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4095177‑4095078‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgACTCGATCTCCAGGGCAATGCGCAACTCCAGCACCGCCAGCACTTCGCGCAGGGTGACCACGGTGGCCGGGTCGATACGGAAACCGCCCGTAGCCGGTGCATCCAG > NC_002947/4095123‑4095228 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |