New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4242849	73 (1.140)	4 (0.070)	4/242	NT	5.6%	intergenic (‑13/+181)	PP_3719/PP_3720	putrescine‑binding protein/NAD(P)H quinone oxidoreductase
	?	NC_002947	= 4242870	65 (1.070)					intergenic (‑34/+160)	PP_3719/PP_3720	putrescine‑binding protein/NAD(P)H quinone oxidoreductase

GCCAGGGTGGTTTCACCGATGTAGTCGGTCCAGTTGTACAACCGTAACGTGTTACCGCTGCCCACCTCTGCCGCCTGGGCAAGGCTGGCGCCAGACGCCAGCAGCAGACCGCCAATCACCTTCAGTACCTTGCGCATGGCAACTCCATCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4242700‑4242849 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccatcgGCTCGATCCGGAGCACTCACACGATGGAGTTGCCATGCGCAAGGTACTGAAGGTGATTGGCGGTCTGCTGCTGGCGTCTGGCGCCAGCCTTGCCCAGGCGGCAGAGGTGGGCAGCGGTAACACGTTACGGTTGTACAACTGGACCGAC  <  NC_002947/4242870‑4242723                                                                                                                                                                                                                                                                                                            GCCAGGGTGGTTTCACCGATGTAGTCGGTCCAGTTGTACAACCGTAACGTGTTACCGCTGCCCACCTCTGCCGCCTGGGCAAGGCTGGCGCCAGACGCCAGCAGCAGACCGCCAATCACCTTCAGTACCTTGCGCATGGCAACTCCATC                                                                                                                                                       <  5:225569/149‑1               ACCGATGTAGTCGGTCCAGTTGTACAACCGTAACGTGTTACCGCTGCCCACCTCTGCCGCCTGGGCAAGGCTGGCGCCAGACGCCAGCAGCAGACCGCCAATCACCTTCAGTACCTTGCGCATGGCAACTCCATCGGCTCGATCCGGAG                                                                                                                                         >  3:200176/1‑149                                       CAACCGTAACGTGTTACCGCTGCCCACCTCTGCCGCCTGGGCAAGGCTGGCGCCAGACGCCAGCAGCAGACCGCCAATCACCTTCAGTACCTTGCGCATGGCAACTCCATCGGCTCGATCCGGAGCACTCACACGATGGAGTTGCCAT                                                                                                                  <  4:200176/148‑1                                        AACCGTAACGTGTTACCGCTGCCCACCTCTGCCGCCTGGGCAAGGCTGGCGCCAGACGCCAGCAGCAGACCGCCAATCACCTTCAGTACCTTGCGCATGGCAACTCCATCGGCTCGATCCGGAGCACTCACACGATGGAGTT                                                                                                                       <  1:252917/142‑1                                        AACCGTAACGTGTTACCGCTGCCCACCTCTGCCGCCTGGGCAAGGCTGGCGCCAGACGCCAGCAGCAGACCGCCAATCACCTTCAGTACCTTGCGCATGGCAACTCCATCGGCTCGATCCGGAGCACTCACACGATGGAGTT                                                                                                                       >  2:252917/1‑142                                                                                                                                                   ATCGGCTCGATCCGGAGCACTCACACGATGGAGTTGCCATGCGCAAGGTACTGAAGGTGATTGGCGGTCTGCTGCTGGCGTCTGGCGCCAGCCTTGCCCAGGCGGCAGAGGTGGGCAGCGGTAACACGTTACGGTTGTACAACTtggt      >  5:343617/1‑144                                                                                                                                                      GGCTCGATCCGGAGCACTCACACGATGGAGTTGCCATGCGCAAGGTACTGAAGGTGATTGGCGGTCTGCTGCTGGCGTCTGGCGCCAGCCTTGCCCAGGCGGCAGAGGTGGGCAGCGGTAACACGTTACGGTTGTACAACTGGACCGAC  <  3:169809/149‑1                                                                                                                                                                                                                                                                                                            GCCAGGGTGGTTTCACCGATGTAGTCGGTCCAGTTGTACAACCGTAACGTGTTACCGCTGCCCACCTCTGCCGCCTGGGCAAGGCTGGCGCCAGACGCCAGCAGCAGACCGCCAATCACCTTCAGTACCTTGCGCATGGCAACTCCATCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4242700‑4242849 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccatcgGCTCGATCCGGAGCACTCACACGATGGAGTTGCCATGCGCAAGGTACTGAAGGTGATTGGCGGTCTGCTGCTGGCGTCTGGCGCCAGCCTTGCCCAGGCGGCAGAGGTGGGCAGCGGTAACACGTTACGGTTGTACAACTGGACCGAC  <  NC_002947/4242870‑4242723

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.