New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4299914 =	72 (1.130)	4 (0.070)	4/234	NT	5.7%	coding (545/870 nt)	PP_3772	repressor protein‑like protein
	?	NC_002947	4299988 =	65 (1.100)					coding (619/870 nt)	PP_3772	repressor protein‑like protein

GTAGATACCATCACCGACGAATTCGCGGATGCTGACGTCGACGATCAGCGGGTCGCGGTGCCTGATGGTCGGCTCCATCGACTGGCCCCAGCCAGTCACCATCTTCAGGTGATGGTGCTCGCTGAACGTCACGCCCAGTTCGCGCAGGTGGCTGGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4300071‑4299914 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggctggggcCAGTCGATGGAGCCGACCATCAGGCACCGCGACCCGCTGATCGTCGACGTCAGCATCCGCGAATTCGTCGGTGATGGTATCTACTTCTTTTCCTGGGGCGACCACATCTACATCAAGCGGCTACAGATCGCGGACGAGGACCACTTC  >  NC_002947/4299988‑4300134                                                                                                                                                                                                                                                                                                                   GTAGATACCATCACCGACGAATTCGCGGATGCTGACGTCGACGATCAGCGGGTCGCGGTGCCTGATGGTCGGCTCCATCGACTGGCCCCAGCCAGTCACCATCTTCAGGTGATGGTGCTCGCTGAACGTCACGCCCAGTTCGCGCAGGT                                                                                                                                                              >  3:92309/1‑149        CCATCACCGACGAATTCGCGGATGCTGACGTCGACGATCAGCGGGTCGCGGTGCCTGATGGTCGGCTCCATCGACTGGCCCCAGCCAGTCACCATCTTCAGGTGATGGTGCTCGCTGAACGTCACGCCCAGTTCGCGCAGGTGGCTGG                                                                                                                                                        <  1:269923/148‑1         CATCACCGACGAATTCGCGGATGCTGACGTCGACGATCAGCGGGTCGCGGTGCCTGATGGTCGGCTCCATCGACTGGCCCCAGCCAGTCACCATCTTCAGGTGATGGTGCTCGCTGAACGTCACGCCCAGTTCGCGCAGGTGGCTGGGG                                                                                                                                                      >  8:162319/1‑149         CATCACCGACGAATTCGCGGATGCTGACGTCGACGATCAGCGGGTCGCGGTGCCTGATGGTCGGCTCCATCGACTGGCCCCAGCCAGTCACCATCTTCAGGTGATGGTGCTCGCTGAACGTCACGCCCAGTTCGCGCAGGTGGCTGGGG                                                                                                                                                      >  8:167697/1‑149         CATCACCGACGAATTCGCGGATGCTGACGTCGACGATCAGCGGGTCGCGGTGCCTGATGGTCGGCTCCATCGACTGGCCCCAGCCAGTCACCATCTTCAGGTAATGGTGCTCGCTGAACGTCACGCCCAGTTCGCGCAGGTGGCTGGGG                                                                                                                                                      >  4:14182/1‑149                                                                                 ACTGGCCCCAGCCAGTCACCATCTTCAGGTGATGGTGCTCGCTGAACGTCACGCCCAGTTCGCGCAGGTGGCTGGGGCCAGTCGATGGAGCCGACCATCAGGCACCGCGACCCGCTGATCGTCGACGTCAGCATCCGCGAATTCGTCGG                                                                              >  3:25430/1‑149                                                                                      CCCCAGCCAGTCACCATCTTCAGGTGATGGTGCTCGCTGAACGTCACGCCCAGTTCGCGCAGGTGGCTGGGGCCAGTCGATGGAGCCGACCATCAGGCACCGCGACCCGCTGATCGTCGACGTCAGCATCCGCGAATTCGTCGGTGATG                                                                         >  5:213012/1‑149                                                                                        CCAGCCAGTCACCATCTTCAGGTGATGGTGCTCGCTGAACGTCACGCCCAGTTCGCGCAGGTGGCTGGGGCCAGTCGATGGAGCCGACCATCAGGCACCGCGACCCGCTGATCGTCGACGTCAGCATCCGCGAATTCGTCGGTGATGGT                                                                       <  6:213012/149‑1                                                                                                           AGGTGATGGTGCTCGCTGAACGTCACGCGCAGTTCGCGCAGGTGGCTGGGGCCAGTCGATGGAGCCGACCATCAGGCACCGCGACCCGCTGATCGTCGACGTCAGCATCCGCGAATTCGTCGGTGATGGTATCTACTTCTTTTCCTGGG                                                    <  4:25430/149‑1                                                                                                                                                     TGGCTGGGGCCAGTCGATGGAGCCGACCATCAGGCACCGCGACCCGCTGATCGTCGACGTCAGCATCCGCGAATTCGTCGGTGATGGTATCTACTTCTTTTCCTGGGGCGACCACATCTACATCAACCGGCTACAGAAAGCGGACGAG           >  6:169632/1‑148                                                                                                                                                       GCTGGGGCCAGTCGATGGAGCCGACCATCAGGCACCGCGACCCGCTGATCGTCGACGTCAGCATCCGCGAATTCCTCGGTGATGGTATCTACTTCTTTTCCTGGGGCGACCACATCTACATCAAGCGGCTACAGATCGCGGACGAGGAC        >  2:332340/1‑149                                                                                                                                                           GGGCCAGTCGATGGAGCCGACCATCAGGCACCGCGACCCGCTGATCGTCGACGTCAGCATCCGCGAATTCGTCGGTGATGGTATCTACTTCTTTTCCTGGG                                                    <  7:108705/101‑1                                                                                                                                                           GGGCCAGTCGATGGAGCCGACCATCAGGCACCGCGACCCGCTGATCGTCGACGTCAGCATCCGCGAATTCGTCGGTGATGGTATCTACTTCTTTTCCTGGG                                                    >  8:108705/1‑101                                                                                                                                                             GCCAGTCGATGGAGCCGACCATCAGGCACCGCGACCCGCTGATCGTCGACGTCAGCATCCGCGAATTCGTCGGTGATGGTATCTACTTCTTTTCCTGGGGCGACCACATCTACATCAAGCGGCTACAGATCGCGGACGAGGACCACTTC  >  2:168931/1‑149                                                                                                                                                             GCCAGTCGATGGAGCCGACCATCAGGCACCGCGACCCGCTGATCGTCGACGTCAGCATCCGCGAATTCGTCGGTGATGGTATCTACTTCTTTTCCTGGGGCGACCACATCTACATCAAGCGGCTACAGATCGCGGACGAGGACCACTTC  >  6:357668/1‑149                                                                                                                                                             GCCAGTCGATGGAGCCGACCATCAGGCACCGCGACCCGCTGATCGTCGACGTCAGCATCCGCGAATTCGTCGGTGATGGTATCTACTTCTTTTCCTGGGGCGACCACATCTACATCAAGCGGCTACAGATCGCGGACGAGGACCACTTC  <  7:15232/149‑1                                                                                                                                                                                                                                                                                                                   GTAGATACCATCACCGACGAATTCGCGGATGCTGACGTCGACGATCAGCGGGTCGCGGTGCCTGATGGTCGGCTCCATCGACTGGCCCCAGCCAGTCACCATCTTCAGGTGATGGTGCTCGCTGAACGTCACGCCCAGTTCGCGCAGGTGGCTGGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4300071‑4299914 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggctggggcCAGTCGATGGAGCCGACCATCAGGCACCGCGACCCGCTGATCGTCGACGTCAGCATCCGCGAATTCGTCGGTGATGGTATCTACTTCTTTTCCTGGGGCGACCACATCTACATCAAGCGGCTACAGATCGCGGACGAGGACCACTTC  >  NC_002947/4299988‑4300134

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.