| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4419693 | 64 (1.000) | 4 (0.070) | 4/242 | NT | 6.4% | coding (460/552 nt) | PP_3910 | hypothetical protein |
| ? | NC_002947 | = 4419709 | 56 (0.920) | coding (476/552 nt) | PP_3910 | hypothetical protein | |||||
CTGGACGACCTCTGGAAAGCACACTGCCCGGACGCTATCGACCGGGACGAAATGTGGGAGGCCATCGGCGTCGAGCGTGGCGGCATCTGGCTCAGTGGCGGTATGTGCTTCAGCCACGGCGATACCGTATACCTGAACCTGGGCAGCAAGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4419540‑4419693‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggccgTCGACATCGCCGTCAGCGGCCTTGCTGCCCAGGTTCAGGTATACGGTATCGCCGTGGCTGAAGCACATACCGCCACTGAGCCAGATGCCGCCACGCTCGACGCCGATGGCCT < NC_002947/4419709‑4419598 cttGACGACCTCTGGAAAGCACACTGCCCGGACGCTATCGACCGGGACGAAATGTGGGAGGCCATCGGCGTCGAGCGTGGCGGCATCTGGCTCAGTGGCGGTATGTGCTTCAGCCACGGCGATACCGTATACCTGAACCTGGGCAGCAA < 3:321626/146‑1 CTTCAGCCACGGCGATACCGTATACCTGAACCTGGGCAGCAAGGCCGTCGACATCGCCGTCAGCGGC < 5:71494/67‑1 CTTCAGCCACGGCGATACCGTATACCTGAACCTGGGCAGCAAGGCCGTCGACATCGCCGTCAGCGGC > 6:71494/1‑67 CTGAACCTGGGCAGCAAGGCCGCTGACGGCGATGTCGACGGCCTTGCTGCCCAGGTTCAGGTATACGGTATCGCCGTGGCTGAAGCACATACCGCCACTGAGCCAGATGCCGCCACGCTCGACGCCGATGGCCT < 1:74291/134‑1 CTGAACCTGGGCAGCAAGGCCGCTGACGGCGATGTCGACGGCCTTGCTGCCCAGGTTCAGGTATACGGTATCGCCGTGGCTGAAGCACATACCGCCACTGAGCCAGATGCCGCCACGCTCGACGCCGATGGCCT > 2:74291/1‑134 GGCCGTCGACATCGCCGTCAGCGGCCTTGCTGCCCAGGTTCAGGTATACGGTATCGCCGTGGCTGAAGCACATACCGCCACTGAGCCAGATGCCGCCACGCTCGACGCCGATGGCC < 8:48572/116‑1 CTGGACGACCTCTGGAAAGCACACTGCCCGGACGCTATCGACCGGGACGAAATGTGGGAGGCCATCGGCGTCGAGCGTGGCGGCATCTGGCTCAGTGGCGGTATGTGCTTCAGCCACGGCGATACCGTATACCTGAACCTGGGCAGCAAGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4419540‑4419693‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggccgTCGACATCGCCGTCAGCGGCCTTGCTGCCCAGGTTCAGGTATACGGTATCGCCGTGGCTGAAGCACATACCGCCACTGAGCCAGATGCCGCCACGCTCGACGCCGATGGCCT < NC_002947/4419709‑4419598 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |