| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4572284 = | 68 (1.060) | 4 (0.070) | 4/242 | NT | 6.2% | coding (2148/2775 nt) | treY | maltooligosyl trehalose synthase |
| ? | NC_002947 | 4572328 = | 56 (0.920) | coding (2192/2775 nt) | treY | maltooligosyl trehalose synthase | |||||
GACCAGGCTGAAGTCCCAGTATTCGTTACCCTGGTACAGGTCGGGCACACCGGGTGTGGTCATGCGCAACAGGGCCTGGACCAGGCCATTGAGAGCGCCGGGGCAGGCCAGCAGCTGCGCCGCGTCGGCCAGCGACTTGCGCAGTTGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4572434‑4572284‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctggCCTGCCCCGGCGCTCTCAATGGCCTGGTCCAGGCCCTGTTGCGCATGACCACACCCGGTGTGCCCGACCTGTACCAGGGTAACGAATACTGGGACTTCAGCCTGGTCGACC > NC_002947/4572328‑4572438 GACCAGGCTGAAGTCCCAGTATTCGTTACCCTGGTACAGGTCGGGCACACCGGGTGTGGTCATGCGCAACAGGGCCTGGACCAGGCCATTGAGAGCGCCGGGGCAGGCCAGCAGCTGCGCCGCGTCGGCCAGCGACTTGCGCAGTTGCT < 4:303950/149‑1GACCAGGCTGAAGTCCCAGTATTCGTTACCCTGGTACAGGTCGGGCACACCGGGTGTGGTCATGCGCAACAGGGCCTGGACCAGGCCATTGAGAGCGCCGGGGCAGGCCAGCAGCTGCGCCGCGTCGGCCAGCGACTTGCGCAGTTGCT > 5:396195/1‑149 ACCAGGCTGAAGTCCCAGTATTCGTTACCCTGGTACAGGTCTGGCACACCGGGTGTGGTCATGCGCAACAGGGCCTGGACCAGGCCATTGAGAGCGCCGGGGCAGGCCAGCAGCTGCGCCGCGTCGGCCAGCGACTTGCGCAGTTGCTG < 5:260205/149‑1 CCAGGCTGAAGTCCCAGTATTCGTTACCCTGGTACAGGTCGGGCACACCGGGTGTGGTCATGCGCAACAGGGCCTGGACCAGGCCATTGAGAGCGCCGGGGCAGGCCAGCAGCTGCGCCGCGTCGGCCAGCGACTTGCGCAGTTGCTGG < 8:232732/149‑1 CCAGCAGCTGCGCCGCGTCGGCCAGCGACTTGCGCAGTTGCTGGCCTGCCCCGGCGCTCTCAATGGCCTGGTCCAGGCCCTGTTGCGCATGACCACACCCGGTGTGCCCGACCTGTACCAGGGTAACGAATACTGGGACTTCAGCCTGG > 6:7592/1‑149 GCTGCGCCGCGTCGGCCAGCGACTTGCGCAGTTGCTGGCCTGCCCCGGCGCTCTCAATGGCCTGGTCCAGGCCCTGTTGCGCATGACCACACCCGGTGTGCCCGACCTGTACCAGGGTAACGAATACTGGGACTTCAGCCTGGTCGACC < 5:7592/149‑1 CTGCGCCGCGTCGGCCAGCGACTTGCGCAGTTGCTGGCCTGCCCCGGCGCTCTCAATGGCCTGGTCCAGGCCCTGTTGCGCATGACCACACCCGGTGTGCCCGACCTGTACCA > 1:340436/1‑113 CTGCGCCGCGTCGGCCAGCGACTTGCGCAGTTGCTGGCCTGCCCCGGCGCTCTCAATGGCCTGGTCCAGGCCCTGTTGCGCATGACCACACCCGGTGTGCCCGACCTGTACCA < 2:340436/113‑1 GACCAGGCTGAAGTCCCAGTATTCGTTACCCTGGTACAGGTCGGGCACACCGGGTGTGGTCATGCGCAACAGGGCCTGGACCAGGCCATTGAGAGCGCCGGGGCAGGCCAGCAGCTGCGCCGCGTCGGCCAGCGACTTGCGCAGTTGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4572434‑4572284‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctggCCTGCCCCGGCGCTCTCAATGGCCTGGTCCAGGCCCTGTTGCGCATGACCACACCCGGTGTGCCCGACCTGTACCAGGGTAACGAATACTGGGACTTCAGCCTGGTCGACC > NC_002947/4572328‑4572438 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |