New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4647595	13 (0.200)	3 (0.070)	3/176	NT	28.6%	intergenic (+48/+83)	fusB/PP_4112	elongation factor G 2/sulfate transporter
	?	NC_002947	= 4647625	6 (0.140)					intergenic (+78/+53)	fusB/PP_4112	elongation factor G 2/sulfate transporter

TACGCCACCTCGATGCGCTCGATGACCCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAA‑GAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4647425‑4647595 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgtgccggcctcttcgcgggtaaacccgctcctacaggGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGAGAACCGCTTACTCCCCGCGGCTCTTCTTGACGATGCCATCGGCAATGCTCGCCGGGGCCTCGGCATAGCGG  <  NC_002947/4647625‑4647484                                                                                                                                                                                                                                                                                                                            TACGCCACCTCGATGCGCTCGATGACCCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAA‑GAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCG                                                                                                                                                                      >  5:318074/1‑149     CCACCTCGATGCGCTCGATGACCCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAA‑GAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGG                                                                                                                                                                  >  7:93666/1‑149     CCACCTCGATGCGCTCGATGACCCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAA‑GAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGG                                                                                                                                                                  >  8:229882/1‑149      CACCTCGATGCGCTCGATGACCCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAA‑GAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGT                                                                                                                                                                 <  1:77482/149‑1      CACCTCGATGCGCTCGATGACCCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAA‑GAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGG                                                                                                                                                                  >  6:167172/1‑148      CACCTCGATGCGCTCGATGACCCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAA‑GAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGG                                                                                                                                                                  >  2:77482/1‑148                 GCTCGATGACCCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAACGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTC                                                                                                                                                       <  1:112538/149‑1                  CTCGATGACCCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTCCCGATGGCATCGTCAAGAA‑GAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCC                                                                                                                                                                                <  3:123289/122‑1                  CTCGATGACCCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTCCCGATGGCATCGTCAAGAA‑GAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCC                                                                                                                                                                                >  4:123289/1‑122                     GATGACCCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAA‑GAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTA                                                                                                                                                    <  7:229882/147‑1                      ATGACCCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAA‑GAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAG                                                                                                                                                 <  4:57360/149‑1                                      CCAGCTTCTCGATGTAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAA‑GAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAAC                                                                                                                                                             <  1:316137/121‑1                                      CCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAA‑GAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAAC                                                                                                                                                             >  2:316137/1‑121                                                            CCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAA‑GAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGG                                                                                                                                                                  >  2:354611/1‑94                                                            CCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAA‑GAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGG                                                                                                                                                                  <  1:354611/94‑1                                                              GCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAA‑GAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGGGCGCACAATGTTTGGGCCTGCGACCATCCTGTAGGA                                                                                                         <  8:27035/149‑1                                                                                                       AAGAA‑GAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGG                                                                                                                                                                   <  4:78582/50‑1                                                                                                       AAGAA‑GAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGG                                                                                                                                                                   >  3:78582/1‑50                                                                                                                CCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAGGAGCGG                                                                                                     <  5:117185/104‑1                                                                                                                CCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAGGAGCGG                                                                                                     >  6:117185/1‑104                                                                                                                                                CTCTTCGCGGGTAAACCCGCTCCTACAGGGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGGACAGGAGAACCGCGTACT                                                             >  3:306381/1‑112                                                                                                                                                        GGGTAAACCCGCTCCTACAGGGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGAGAACCGCTTACTCCCCGCGGCTCTTCTTGACGATGCCATCGGCAATGCTCGCCGGGG                >  7:237504/1‑149                                                                                                                                                               CCCGCTCCTACAGGGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGAGAACCGCTTACTCCCCGCGGCTCTTCTTGACGATGCCATCGGCAATGCTCGCCGGGGCCTCGG          >  5:213608/1‑148                                                                                                                                                                CCGCTCCTACAGGGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGAGAACCGCTTACTCCCCGCGGCTCTTCTTGACGATGCCATCGGCAATGCTCGCCGGGGCCTCGGCA        >  5:41775/1‑149                                                                                                                                                                 CGCTCCTACAGGGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGAGAACCGCTTACTCCCCGCGGCTCTTCTTGACGATGCCATCGGCAATGCTCGCCGGGGCCTCGGCA        >  6:401282/1‑148                                                                                                                                                                    TCCTACAGGGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGAGAACCGCTTACTCCCCGCGGCTCTTCTTGACGATGCCATCGGCAATGCTCGCCGGGGCCTCGGCATAG     >  8:338026/1‑148                                                                                                                                                                      CTACAGGGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGAGAACCGCTTACTCCCCGCGGCTCTTCTTGACGATGCCATCGGCAATGCTCGCCGGGGCCTCGGCATAGCGG  <  8:237504/149‑1                                                                                                                                                                      CTACAGGGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGAGAACCGCTTACTCCCCGCGGCTCTTCTTGACGATGCCATCGGCAATGCTCGCCGGGGCCTCGGCATAG     <  7:338026/146‑1                                                                                                                                                                                                                                                                                                                            TACGCCACCTCGATGCGCTCGATGACCCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAA‑GAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4647425‑4647595 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgtgccggcctcttcgcgggtaaacccgctcctacaggGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGAGAACCGCTTACTCCCCGCGGCTCTTCTTGACGATGCCATCGGCAATGCTCGCCGGGGCCTCGGCATAGCGG  <  NC_002947/4647625‑4647484

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.