| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4786125 | 67 (1.050) | 4 (0.070) | 4/242 | NT | 6.0% | coding (1189/7887 nt) | pvdJ | non‑ribosomal peptide synthetase |
| ? | NC_002947 | = 4786154 | 62 (1.020) | coding (1160/7887 nt) | pvdJ | non‑ribosomal peptide synthetase | |||||
GAAGGCCAGGTCGAAACGCGCATCGGCGCCGCTCAACGGGTACTCCTCGACCTGCAGACCGCTGAGGGTCTTGCGCTGCTCGCCGCCGGCAGCTTCACCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4786024‑4786125‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acccgcTG‑TTCCAGTTCAAGCTCAACCAGAACGTCGCGGGTGAAGCTGCCGGCGGCGAGCAGCGCAAGACCCTCAGCGGTCTGCAGGTCGAGGAGTACCCGTTGAGCGGCGCCGATGCGCGTTTCGACCTGGCCTTCGACTTCACCGATGG < NC_002947/4786154‑4786010 GAAGGCCAGGTCGAAACGCGCATCGGCGCCGCTCAACGGGTACTCCTCGACCTGCAGACCGCTGAGGGTCTTGCGCTGCTCGCCGCCGGCAGCTTCACCCGCTG‑TTCCAGTTCAAGCTCAACCAGAACGTCGCGGG < 5:265614/136‑1GAAGGCCAGGTCGAAACGCGCATCGGCGCCGCTCAACGGGTACTCCTCGACCTGCAGACCGCTGAGGGTCTTGCGCTGCTCGCCGCCGGCAGCTTCACCCGCTG‑TTCCAGTTCAAGCTCAACCAGAACGTCGCGGG > 6:265614/1‑136 AAGGCCAGGTCGAAACGCGCATCGGCGCCGCTCAACGGGTACTCCTCGACCTGCAGACCGCTGAGGGTCTTGCGCTGCTCGCCGCCGGCAGCTTCACCCGCTG‑TTCCAGTTCAAGCTCAACCAGAACGTCGCGGGTGAAG > 7:105516/1‑140 AAGGCCAGGTCGAAACGCGCATCGGCGCCGCTCAACGGGTACTCCTCGACCTGCAGACCGCTGAGGGTCTTGCGCTGCTCGCCGCCGGCAGCTTCACCCGCTG‑TTCCAGTTCAAGCTCAACCAGAACGTCGCGGGTGAAG < 8:105516/140‑1 aataCCGCTGCTTCCAGTTCAAGCTCAACCAGAACGTCGCGGGTGAAGCTGCCGGCGGCGAGCAGCGCAAGACCCTCAGCGGTCTGCAGGTCGAGGAGTACCCGTTGAGCGGCACCGATGCGCGTTTCGACCTGGCCTTCGACTTCACC > 4:105268/5‑149 CCCGCTG‑TTCCAGTTCAAGCTCAACCAGAACGTCGCGGGTGAAGCTGCCGGCGGCGAGCAGCGCAAGACCCTCAGCGGTCTGCAGGTCGAGGAGTACCCGTTGAGCGGCGCCGATGCGCGTTTCGACCTGGCCTTCGACTTCACCGATG < 6:296331/149‑1 CCGCTG‑TTCCAGTTCAAGCTCAACCAGAACGTCGCGGGTGAAGCTGCCGGCGGCGAGCAGCGCAAGACCCTCAGCGGTCTGCAGGTCGAGGAGTACCCGTTGAGCGGCGCCGATGCGCGTTTCGACCTGGCCTTCGACTTCACCGATGG > 3:191519/1‑149 GAAGGCCAGGTCGAAACGCGCATCGGCGCCGCTCAACGGGTACTCCTCGACCTGCAGACCGCTGAGGGTCTTGCGCTGCTCGCCGCCGGCAGCTTCACCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4786024‑4786125‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acccgcTG‑TTCCAGTTCAAGCTCAACCAGAACGTCGCGGGTGAAGCTGCCGGCGGCGAGCAGCGCAAGACCCTCAGCGGTCTGCAGGTCGAGGAGTACCCGTTGAGCGGCGCCGATGCGCGTTTCGACCTGGCCTTCGACTTCACCGATGG < NC_002947/4786154‑4786010 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |