New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4825676 | 59 (0.920) | 4 (0.070) | 4/244 | NT | 6.6% | coding (5514/12954 nt) | pvdL | non‑ribosomal peptide synthetase |
? | NC_002947 | = 4825741 | 56 (0.910) | coding (5449/12954 nt) | pvdL | non‑ribosomal peptide synthetase |
CTGCACCGGCAGCGGCGCCAGTGGCGACTCGCGGTCATCGACAAAGGCTTCGTACAGCTCGCCCAGTTCGCGGGCGAAGATGTCCATGGCCCAGCCTTCGGTGACGATGTGATGCAGCGTCAGCACGAAGAAGTGCTCGCGCTCGTTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4825526‑4825676 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccGACGACCAGGCGCACCAGCCCTTCGACCTGGAGCGGGGGCCGCTGCTGCGCGCCTGCCTGGTCAAGGCCAACGAGCGCGAGCACTTCTTCGTGCTGACGCTGCATCACATCGTCACCGAAGGCTGGGCCATGGACATCTTCGCCCGC < NC_002947/4825741‑4825595 CTGCACCGGCAGCGGCGCCAGTGGCGACTCGCGGTCATCGACAAAGGCTTCGTACAGCTCGCCCAGTTCGCGGGCGAAGATGTCCATGGCCCAGCCTTCGGTGACGATGTGATGCAGCGTCAGCACGAAGAAGTGCTCGCGCTCGTTG < 6:277969/148‑1 ACAAAGGCTTCGTACAGCTCGCCCAGTTCGCGGGCGAAGATGTCCATGGCCCAGCCTTCGGTGACGATGTGATGCAGCGTCAGCACGAAGAAGTGCTCGCGCTCGTTGGCCGACGACCAGGCGCACCAGCCCTTCGACCTGGAGCGGGG > 4:400871/1‑149 AAGATGTCCATGGCCCAGCCTTCGGTGACGATGTGATGCAGCGTCAGCACGAAGAAGTGCTCGCGCTCGTTGGCCGACGACCAGGCGCACCAGCCCTTCGACCTGGAGCGGGGGCCGCTGCTGCGCGCCTGCCTGGTCAAGGCCAACGA < 3:400871/149‑1 GTGATGCAGCGTCAGCACGAAGAAGTGCTCGCGCTCGTTGGCCGACGACCAGGCGCACCAGCCCTTCGACCTGGAGCGGGGGCCGCTGCTGCGCGCCTGCCTGGTCAAGGCCAACGAGCGC > 1:10541/1‑121 GTGATGCAGCGTCAGCACGAAGAAGTGCTCGCGCTCGTTGGCCGACGACCAGGCGCACCAGCCCTTCGACCTGGAGCGGGGGCCGCTGCTGCGCGCCTGCCTGGTCAAGGCCAACGAGCGC < 2:10541/121‑1 TGGCCGACGACCAGGCGCACCAGCCCTTCGACCTGGAGCGGGGGCCGCTGCTGCGCGCCTGCCTGGTCAAGGCCAACGAGCGCGAGCACTTCTTCGTGCTGACGCTGCATCACATCGTCACCGAAGGCTGGGCCATGGACATCTTCGCC > 7:167058/1‑149 CCGACGACCAGGCGCACCAGCCCTTCGACCTGGAGCGGGGGCCGCTGCTGCGCGCCTGCCTGGTCAAGGCCAACGAGCGCGAGCACTTCTTCGTGCTGACGCTGCATCACATCGTCACCGAAGGCTGGGCCATGGACATCTTCGCCCGC < 8:167058/149‑1 CGACGACCAGGCGCACCAGCCCTTCGACCTGGAGCGGGGGCCGCTGCTGCGCGCCTGCCTGGTCAAGGCCAACGAGCGCGA < 3:382544/81‑1 CGACGACCAGGCGCACCAGCACTTCGACCTGGAGCGGGGGCCGCTGCTGCGCGCCTGCCTGGTCAAGGCCAACGAGCGCGA > 4:382544/1‑81 CTGCACCGGCAGCGGCGCCAGTGGCGACTCGCGGTCATCGACAAAGGCTTCGTACAGCTCGCCCAGTTCGCGGGCGAAGATGTCCATGGCCCAGCCTTCGGTGACGATGTGATGCAGCGTCAGCACGAAGAAGTGCTCGCGCTCGTTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4825526‑4825676 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccGACGACCAGGCGCACCAGCCCTTCGACCTGGAGCGGGGGCCGCTGCTGCGCGCCTGCCTGGTCAAGGCCAACGAGCGCGAGCACTTCTTCGTGCTGACGCTGCATCACATCGTCACCGAAGGCTGGGCCATGGACATCTTCGCCCGC < NC_002947/4825741‑4825595 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |