New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4992723 =	63 (0.980)	4 (0.060)	4/248	NT	6.0%	coding (680/1233 nt)	bkdAA	branched‑chain alpha‑keto acid dehydrogenase complex subunit alpha
	?	NC_002947	4992766 =	64 (1.020)					coding (723/1233 nt)	bkdAA	branched‑chain alpha‑keto acid dehydrogenase complex subunit alpha

TTGGTTGTTGACCACGTTGAGGATGACCGGGGCGCGGTATACGTGGGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4992772‑4992723 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caaCAACCAATGGGCCATTTCCACCTTCCAGGCCATCGCCGGTGGCGAGTCGACCACCTTTGCCGGCCGTGGCGTGGGTTGCGGTATTGCTTCGCTGCGGGTTGACGGCAACGACTTCGTCGCCGTGTACGCTGCCTCGCGCTGGGCGGCC  >  NC_002947/4992766‑4992913                                                                                                                                                                                                        TTGGTTGTTGACCACGTTGAGGATGACCGGGGCGCGGTATACGTGGGCAACAACCAATGGGCCATTTCCACCTTCCAGGCCATCGCCGGTGGCGAGTCGACCACCTTTGCCGGCCGTGGCGTGGGTTGCGGTATTGCTTCGCTGCGGGT                                                   >  4:202803/1‑149       GTTGACCACGTTGAGGATGACCGGGGCGCGGTATACGTGGGCAACAACCAATGGGCCATTTCCACCTCCCAGGCCATCGCCGGTGGCGAGTCGACCACCTTTGCCGGCCGTGGCGTGGGTTGCGGTATTGCTTCGCTGCGGGTTGACGG                                             >  4:397312/1‑149        TTGACCACGTTGAGGATGACCGGGGCGCGGTATACGTGGGCAACAACCAATGGGCCATTTCCACCTTCCAGGCCATCGCCGGTGGCGAGTCGACCACCTTTGCCGGCCGTGGCGTGGGTTGCGGTATTGCT                                                              <  3:194009/131‑1        TTGACCACGTTGAGGATGACCGGGGCGCGGTATACGTGGGCAACAACCAATGGGCCATTTCCACCTTCCAGGCCATCGCCGGTGGCGAGTCGACCACCTTTGCCGGCCGTGGCGTGGGTTGCGGTATTGCT                                                              >  4:194009/1‑131                                              gtaAACTACCAATGGGCCATTTGGACCTTGCAGGCGATCGGCGGTGGCGAGTCGACCACCTTTGCCGGCCGTGGCGTGGGTTGCGGTATTGCTTCGCTGCGGGTTGACGGCAACGACTTCGTCGCCGTGTACGCTGCCTCGCGCTGGGC      <  8:40964/146‑1                                              GGCAACAACCAATGGGCCATTTCCACCTCCCAGGCCATCGCCGGTGGCGAGTCGACCACCTTTGCCGGCCGTGGCGTGGGTTGCGGTATTGCTTCGCTGCGGGTTGACGGCAACGACTTCGTCGCCGTGTACGCTGCCTCGCGCTGGG       <  3:397312/148‑1                                                 AACAACCAATGGGCCATTTCCACCTTCCAGGCCATCGCCGGTGGCGAGTCGACCACCTTTGCCGGCCGTGGCGTGGGTTGCGGTATTGCTTCGCTGCGGGTTGACGGCAACGACTTCGTCGCCGTGT                         >  5:136033/1‑127                                                 AACAACCAATGGGCCATTTCCACCTTCCAGGCCATCGCCGGTGGCGAGTCGACCACCTTTGCCGGCCGTGGCGTGGGTTGCGGTATTGCTTCGCTGCGGGTTGACGGCAACGACTTCGTCGCCGTGT                         <  6:136033/127‑1                                                  ACAACCAATGGGCCATTTCCACCTTCCAGGCCATCGCCGGTGGCGAGTCGACCACCTTTGCCGGCCGTGGCGTGGGTTGCGGTATTGCTTCGCTGCGGGTTGACGGCAACGACTTCGTCGCCGTGTACGCTGCCTCGCGCTGGGCGGCC  >  2:265512/1‑149                                                                                                                                                                                                        TTGGTTGTTGACCACGTTGAGGATGACCGGGGCGCGGTATACGTGGGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4992772‑4992723 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caaCAACCAATGGGCCATTTCCACCTTCCAGGCCATCGCCGGTGGCGAGTCGACCACCTTTGCCGGCCGTGGCGTGGGTTGCGGTATTGCTTCGCTGCGGGTTGACGGCAACGACTTCGTCGCCGTGTACGCTGCCTCGCGCTGGGCGGCC  >  NC_002947/4992766‑4992913

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.