| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5022830 = | 63 (0.980) | 4 (0.070) | 4/238 | NT | 6.1% | coding (181/657 nt) | PP_4427 | amino acid ABC transporter permease |
| ? | NC_002947 | 5022927 = | 65 (1.080) | coding (84/657 nt) | PP_4427 | amino acid ABC transporter permease | |||||
CACCTTCTTCGGATCTCTCCTGGCCATCGTTGCAGCGACCCTGGCGGCACTCGGCAAAATGTCGACATGGAGACCGCTCCGCTGGTTTTGCGTCGTCTACATTGAGATCTTTCGGGGTACGTCGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5022957‑5022830‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcgctgcAACGATGGCCAGGAGAGATCCGAAGAAGGTGATCTGCAGGGTAACCCATGCGCCCTGGAGCATAAGTGGTAGTAAATCTGCCATTTGACTCTACCTCACGTTAAATCAGCCAAAGGCGCGGCAGTGGGTTTGACGCGCCGATTT > NC_002947/5022927‑5023070 CACCTTCTTCGGATCTCTCCTGGCCATCGTTGCAGCGACCCTGGCGGCACTCGGCAAAATGTCGACATGGAGACCGCTCCGCTGGTTTTGCGTCGTCTACATTGAGATCTTTCGGGGTACGTCGCTGC > 5:2151/1‑128CACCTTCTTCGGATCTCTCCTGGCCATCGTTGCAGCGACCCTGGCGGCACTCGGCAAAATGTCGACATGGAGACCGCTCCGCTGGTTTTGCGTCGTCTACATTGAGATCTTTCGGGGTACGTCGCTGC < 6:2151/128‑1 TCGTTGCAGCGACCCTGGCGGCACTCGGCAAAATGTCGACATGGAGACCGCTCCGCTGGTTTTGCGTCGTCTACATTGAGATCTTTCGGGGTACGTCGCTGCAACGATGGCCAGGAGAGATCCGAAGAAGGTGATCTGCAGGGTAACC > 1:14064/1‑148 TTGCAGCGACCCTGGCGGCACTCGGCAAAATGTCGACATGGAGACCGCTCCGCTGGTTTTGCGTCGTCTACATTGAGATCTTTCGGGGTACGTCGCTGCAACGATGGCCAGGAGAGATCCGAAGAAGGTGATCTGCAGGGTAACCCATG > 4:36581/1‑149 CGCTGGTTTTGCGTCGTCTACATTGAGATCTTTCGGGGTACGTCGCTGCAACGATGGCCAGGAGAGATCCGAAGAAGGTGATCTGCAGGGTAACCCATGCGCCCTGGAGCATAAGTGGTAGTAAATCTGCCATTTGACTCTACCTCA < 2:14064/147‑1 TTTCGGGGTACGTCGCTGCAACGATGGCCAGGAGAGATCCGAAGAAGGTGATCTGCAGGGTAACCCATGCGCCCTGGAGCATAAGTGGTAGTAAATCTGCCATTTGACTCTACCTCACGTTAAATCAGCCAAAGGCGCGGCAGTGGGTT < 3:36581/149‑1 GCTGCAACGATGGCCAGGAGAGATCCGAAGAAGGTGATCTGCAGGGTAACCCATGCGCCCTGGAGCATAAGTGGTAGTAAATCTGCCATTTGACTCTACCTCACGTTAAATCAGCCAAAGGCGCGGCAGTGGGTTTGACGCGCCGATTT < 1:363566/149‑1 GCTGCAACGATGGCCAGGAGAGATCCGAAGAAGGTGATCTGCAGGGTAACCCATGCGCCCTGGAGCATAAGTGGTAGTAAATCTGCCATTTGACTCTACCTCACGTTAAATCAGCCAAAGGCGCGGCAGTGGGTTTGACGCGCCGATTT > 7:65290/1‑149 CACCTTCTTCGGATCTCTCCTGGCCATCGTTGCAGCGACCCTGGCGGCACTCGGCAAAATGTCGACATGGAGACCGCTCCGCTGGTTTTGCGTCGTCTACATTGAGATCTTTCGGGGTACGTCGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5022957‑5022830‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcgctgcAACGATGGCCAGGAGAGATCCGAAGAAGGTGATCTGCAGGGTAACCCATGCGCCCTGGAGCATAAGTGGTAGTAAATCTGCCATTTGACTCTACCTCACGTTAAATCAGCCAAAGGCGCGGCAGTGGGTTTGACGCGCCGATTT > NC_002947/5022927‑5023070 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |