| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5522274 | 74 (1.160) | 5 (0.080) | 5/242 | NT | 6.6% | coding (15/507 nt) | PP_4856 | Dps family ferritin |
| ? | NC_002947 | = 5522302 | 72 (1.180) | coding (43/507 nt) | PP_4856 | Dps family ferritin | |||||
TGTGGATGCCAAAGGCTTCAAGACCTGCAAGCAACGCCAGGAGGACAGCGACGCCCTGCATGGCGCGTAAGCCTGTGTTCCGACCCGACCCTGACCCCTGCTGGAGATAACCATGAGCAATGTTGAACTGACCGATGTGAAAACCCTGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5522124‑5522274‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcgcCTTGCTCCACATGCTGGCGTGCACGCTCGCGCAGGGTTTT < NC_002947/5522302‑5522263 TGTGGATGCCAAAGGCTTCAAGACCTGCAAGCAACGCCAGGAGGACAGCGACGCCCTGCATGGCGCGTAAGCCTGTGTTCCGACCCGACCCTGACCCCTGCTGGAGATAACCATGAGCAATGTTGAACTGACCGATGTGAAAACCCTGC < 2:197536/149‑1TGTGGATGCCAAAGGCTTCAAGACCTGCAAGCAACGCCAGGAGGACAGCGACGCCCTGCATGGCGCGTAAGCCTGTGTTCCGACCCGACCCTGACCCCTGCTGGAGATAACCATGAGCAATGTTGAACTGACCGATGTGAAAACCCTGC > 4:246724/1‑149 GTGGATGCCAAAGGCTTCAAGACCTGCAAGCAACGCCAGGAGGACAGCGACGCCCTGCATGGCGCGTAAGCCTGTGTTCCGACCCGACCCTGACCCCTGCTGGAGATAACCATGAGCAATGTTGAACTGACCGATGTGAAAACCCTGCG > 2:234009/1‑149 GGATGCCAAAGGCTTCAAGACCTGCAAGCAACGCCAGGAGGACAGCGACGCCCTGCATGGCGCGTAAGCCTGTGTTCCGACCCGACCCTGACCCCTGCTGGAGATAACCATGAGCAATGTTGAACTGACCGATGTGAAAACCCTGCGC > 6:226736/1‑148 CAAAGGCTTCAAGACCTGCAAGCAACGCCAGGAGGACAGCGACGCCCTGCATGGCGCGTAAGCCTGTGTTCCGACCCGACCCTGACCCCTGCTGGAGATAACCATGAGCAATGTTGAACTGACCGATGTGAAAACCCTGCGCCTTGCTC > 8:353495/1‑149 GGAGGACAGCGACGCCCTGCATGGCGCGTAAGCCTGTGTTCCGACCCGACCCTGACCCCTGCTGGAGATAACCATGAGCAATGTTGAACTGACCGATGTGAAAACCCTGCGCCTTGCTCCACATGCTGGCGTGCACGCTCGCGCAGGGT < 3:246724/149‑1 GGACAGCGACGCCCTGCATGGCGCGTAAGCCTGTGTTCCGACCCGACCCTGACCCCTGCTGGAGATAACCATGAGCAATGTTGAACTGACCGATGTGAAAACCCTGCGCCTTGCTCCACATGCTGGCGTGCACGCTCGCGCAGGGTTTT < 7:353495/149‑1 GCCTGTGTTCCGACCCGACCCTGACCCCTGCTGGAGATAACCATGAGCAATGTTGAACTGACCGATGTGAAAACCCTGCGCCTTGCTCCACATGCTGGCGTGCACGCTCGCGCAGG > 5:71473/1‑116 GCCTGTGTTCCGACCCGACCCTGACCCCTGCTGGAGATAACCATGAGCAATGTTGAACTGACCGATGTGAAAACCCTGCGCCTTGCTCCACATGCTGGCGTGCACGCTCGCGCAGG < 6:71473/116‑1 TGTGTTCCGACCCGACCCTGACCCCTGCTGGAGATAACCATGAGCAATGTTGAACTGACCGATGTGAAAACCCTGC > 5:229773/1‑76 TGTGTTCCGACCCGACCCTGACCCCTGCTGGAGATAACCATGAGCAATGTTGAACTGACCGATGTGAAAACCCTGC < 6:229773/76‑1 TGTGGATGCCAAAGGCTTCAAGACCTGCAAGCAACGCCAGGAGGACAGCGACGCCCTGCATGGCGCGTAAGCCTGTGTTCCGACCCGACCCTGACCCCTGCTGGAGATAACCATGAGCAATGTTGAACTGACCGATGTGAAAACCCTGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5522124‑5522274‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcgcCTTGCTCCACATGCTGGCGTGCACGCTCGCGCAGGGTTTT < NC_002947/5522302‑5522263 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |