New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5547469	68 (1.060)	5 (0.080)	4/240	NT	6.6%	coding (1585/2574 nt)	rnr	exoribonuclease R
	?	NC_002947	= 5547503	78 (1.290)					coding (1551/2574 nt)	rnr	exoribonuclease R

GTGGGTGTACGCCTCGTAGTTCAGGCCGAAGTGGCCGTTGTTCTCGGTGCTGTACACGGCCTGGCTCAGCGAGCGCAGCATCACCGTCTGGATCAGGTGGAAGTCCGGGCGACCGGCGATGCTCGCCAGCAGGGCCTGGTAGTCCTTCGGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5547317‑5547469 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggcgaGTTGGGCCTTAGCCTGCACAAGGGCAAGGACCCGTCGCCGAAGGACTACCAGGCCCTGCTGGCGAGCATCGCCGGTCGCCCGGACTTCCACCTGATCCAGACGGTGATGCTGCGCTCGCTGAGCCAGGCCGTGTACAGCACCGAGA  <  NC_002947/5547503‑5547358                                                                                                                                                                                                                                                                                                             GTGGGTGTACGCCTCGTAGTTCAGGCCGAAGTGGCCGTTGTTCTCGGTGCTGTACACGGCCTGGCTCAGCGAGCGCAGCATCACCGTCTGGATCAGGTGGAAGTCCGGGCGACCGGCGATGCTCGCCAGCAGGGCCTGGTAGTCCTTCG                                                                                                                                                        >  8:69953/1‑149   GGGTGTACGCCTCGTAGTTCAGGCCGAAGTGGCCGTTGTTCTCGGTGCTGTACACGGCCTGGCTCAGCGAGCGCAGCATCACCGTCTGGATCAGGTGGAAGTCCGGGCGACCGGCGATGCTCGCCAGCAGGGCCTGGTAGTCCTTCGG                                                                                                                                                       <  4:406518/148‑1                    TTCAGGCCGAAGTGGCCGTTGTTCTCGGTGCTGTACACGGCCTGGCTCAGCGAGCGCAGCATCACCGTCTGGATCAGGTGGAAGTCCTGGCGACCGGCGATGCTCGCCAGCAGGGCCTGGTAGTCCTTCG                                                                                                                                                        >  3:292043/1‑130                    TTCAGGCCGAAGTGGCCGTTGTTCTCGGTGCTGTACACGGCCTGGCTCAGCGAGCGCAGCATCACCGTCTGGATCAGGTGGAAGTCCTGGCGACCGGCGATGCTCGCCAGCAGGGCCTGGTAGTCCTTCG                                                                                                                                                        <  4:292043/130‑1                                            TCGGTGCTGTACACGGCCTGGCTCAGCGAGCGCAGCATCACCGTCTGGATCAGGTGGAAGTCCGGGCGACCGGCGATGCTCGCCAGCAGGGCCTGGTAGTCCTTCGGCGAGTTGGGCCTTAGCCTGCACAAGGGCAAGGACCCGTCGCC                                                                                                             >  8:240427/1‑149                                                TGCTGTACACGGCCTGGCTCAGCGAGCGCAGCATCACCGTCTGGATCAGGTGGAAGTCCGGGCGACCGGCGATGCTCGCCAGCAGGGCCTGGTAGTCCTTCGGCGAGTTGGGCCTTAGCCTGCACAAGGGCAAGGACCCGTCGCCGAAG                                                                                                         <  7:240427/149‑1                                                TGCTGTACACGGCCTGGCTCAGCGAGCGCAGCATCACCGTCTGGATCAGGTGGAAGTCCGGGCGACCGGCGATGCTCGCCAGCAGGGCCTGGTAGTCCTTCGGCGAGTTGGGCCTTAGCCTGCACAAGGGCAAGGACCCGTCGCCGAAG                                                                                                         >  7:263534/1‑149                                                TGCTGTACACGGCCTGGCTCAGCGAGCGCAGCATCACCGTCTGGATCAGGTGGAAGTCCGGGCGACCGGCGATGCTCGCCAGCAGGGCCTGGTAGTCCTTCGGCGAGTTGGGCCTTAGCCTGCACAAGGGCAAGGACCCGTCGCCGAAG                                                                                                         <  8:263534/149‑1                                                                                    CCGTCTGGATCAGGTGGAAGTCCGGGCGACCGGCGATGCTCGCCAGCAGGGCCTGGTAGTCCTTCGGCGAGTTGGGCCTTAGCCTGCACAAGGGCAAGGACCCGTCGCCGAAGGA                                                                                                       >  8:69789/1‑115                                                                                                                                                    CGGCGAGTTGGGCCTTAGCCTGCACAAGGGCAAGGACCCGTCGCCGAAGGACTACCAGGCCCTGCTGGCGAGCATCGCCGGTCGCCCGGACTTCCACCTGATCCAGACGGTGATGCTGCGCTCGCTGAGCCAGGCCGTGT              >  1:325223/1‑140                                                                                                                                                    CGGCGAGTTGGGCCTTAGCCTGCACAAGGGCAAGGACCCGTCGCCGAAGGACTACCAGGCCCTGCTGGCGAGCATCGCCGGTCGCCCGGACTTCCACCTGATCCAGACGGTGATGCTGCGCTCGCTGAGCCAGGCCGTGT              <  2:325223/140‑1                                                                                                                                                       CGAGTTGGGCCTTAGCCTGCACAAGGGCAAGGACCCGTCGCCGAAGGACTACCAGGCCCTGCTGGCGAGCATCGCCGGTCGCCCGGACTTCCACCTGATCCAGACGGTGATGCTGCGCTCGCTGAGCCAGGCCGTGTACAGCACCGAGA  <  8:128910/149‑1                                                                                                                                                                                                                                                                                                             GTGGGTGTACGCCTCGTAGTTCAGGCCGAAGTGGCCGTTGTTCTCGGTGCTGTACACGGCCTGGCTCAGCGAGCGCAGCATCACCGTCTGGATCAGGTGGAAGTCCGGGCGACCGGCGATGCTCGCCAGCAGGGCCTGGTAGTCCTTCGGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5547317‑5547469 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggcgaGTTGGGCCTTAGCCTGCACAAGGGCAAGGACCCGTCGCCGAAGGACTACCAGGCCCTGCTGGCGAGCATCGCCGGTCGCCCGGACTTCCACCTGATCCAGACGGTGATGCTGCGCTCGCTGAGCCAGGCCGTGTACAGCACCGAGA  <  NC_002947/5547503‑5547358

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.