| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5653843 = | 82 (1.280) | 5 (0.080) | 5/242 | NT | 6.6% | coding (632/1164 nt) | pgk | phosphoglycerate kinase |
| ? | NC_002947 | 5653886 = | 63 (1.030) | coding (589/1164 nt) | pgk | phosphoglycerate kinase | |||||
CCGCTGCCGGCCCACTGCTGGCAGCCGAACTGGATGCCTTGGGCAAGGCCCTGAAAGCCCCGGCCAAGCCAATGGCGGCCATCGTTGCCGGCTCCAAGGTTTCCACCAAGCTGGACGTGCTGAACAGCCTCAGCAGTGTTTGCGACCAGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5653993‑5653843‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagctTGGTGGAAACCTTGGAGCCGGCAACGATGGCCGCCATTGGCTTGGCCGGGGCTTTCAGGGCCTTGCCCAAGGCATCCAGTTCGGCTGCCAGCAGTGGGCCGGCAGCGGCCACCTTGGCGAACTTGGCGACGCCATGGGTCGAGC > NC_002947/5653886‑5654029 CCGCTGCCGGCCCACTGCTGGCAGCCGAACTGGATGCCTTGGGCAAGGCCCTGAAAGCCCCGGCCAAGCCAATGGCGGCCATCGTTGCCGGCTCCAAGGTTTCCACCAAGCTGGACGTGCTGAACAGCCTCAGCAGTGTTTGCGACCAG > 1:186608/1‑149CCGCTGCCGGCCCACTGCTGGCAGCCGAACTGGATGCCTTGGGCAAGGCCCTGAAAGCCCCGGCCAAGCCAATGGCGGCCATCGTTGCCGGCTCCAAGGTTTCCACCAAGCTGGACGTGCTGAACAGCCTCAGCAGTGTTTGCGACCAG > 6:213964/1‑149 CGCTGCCGGCCCACTGCTGGCAGCCGAACTGGATGCCTTGGGCAAGGCCCTGAAAGCCCCGGCCAAGCCAATGCCGGCCATCGTTGCCGGCTCCAAGGTTTCCACCAAGCTGGACGTGCTGAACAGCCTCAGCAGTGTTTGCGACCAGC > 1:237767/1‑149 ACCAAGCTGGACGTGCTGAACAGCCTCAGCAGTGTTTGCGACCAGCTTGGTGGAAACCTTGGAGCCGGCAACGATGGCCGCCATTGGCTTGGCCGGGGCTTTCAGGGCCTTGCCCAAGGCATCCAGTTCGGCTGCCAGCAGTGGGCCGG > 2:288567/1‑149 CCAAGCTGGACGTGCTGAACAGCCTCAGCAGTGTTTGCGACCAGCTTGGTGGAAACCTTGGAGCCGGCAACGATGGCCGCCATTGGCTTGGCCGGGGCTTTCAGGGCCTTGCCCAAGGCATCCAGTTCGGCTGCCAGCAGTGGGCCGG > 6:274032/1‑148 CAAGCTGGACGTGCTGAACAGCCTCAGCAGTGTTTGCGACCAGCTTGGTGGAAACCTTGGAGCCGGCAACGATGGCCGCCATTGGCTTGGCCGGGGCTTTCAGGGCCTTGCCCAAGGCATCCAGTTCGGCTGCCAGCA < 3:277398/138‑1 CAAGCTGGACGTGCTGAACAGCCTCAGCAGTGTTTGCGACCAGCTTGGTGGAAACCTTGGAGCCGGCAACGATGGCCGCCATTGGCTTGGCCGGGGCTTTCAGGGCCTTGCCCAAGGCATCCAGTTCGGCTGCCAGCA > 4:277398/1‑138 AACAGCCTCAGCAGTGTTTGCGACCAGCTTGGTGGAAACCTTGGAGCCGGCAACGATGGCCGCCATTGGCTTGGCCGGGGCTTTCAGGGCCTTGCCCAAGGCATCCAGTTCGGCTGCCAGCAGTGGGCCGGCAGCGGCCACCTTGGCG < 5:274032/148‑1 CAGCTTGGTGGAAACCTTGGAGCCGGCAACGATGGCCGCCATTGGCTTGGCCGGGGCTTTCAGGGCCTTGCCCAAGGCATCCAGTTCGGCTGCCAGCAGTGGGCCGGCAGCGGCCACCTTGGCGAACTTGGCGACGCCATGGGTCGAGC > 5:381237/1‑149 CAGCTTGGTGGAAACCTTGGAGCCGGCAACGATGGCCGCCATTGGCTTGGCCGGGGCTTTCAGGGCCTTGCCCAAGGCATCCAGTTCGGCTGCCAGCAGTGGGCCGGCAGCGGCCACCTTGGCGAACTTGGCGACGCCATGGGTCGAGC > 8:212869/1‑149 CCGCTGCCGGCCCACTGCTGGCAGCCGAACTGGATGCCTTGGGCAAGGCCCTGAAAGCCCCGGCCAAGCCAATGGCGGCCATCGTTGCCGGCTCCAAGGTTTCCACCAAGCTGGACGTGCTGAACAGCCTCAGCAGTGTTTGCGACCAGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5653993‑5653843‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagctTGGTGGAAACCTTGGAGCCGGCAACGATGGCCGCCATTGGCTTGGCCGGGGCTTTCAGGGCCTTGCCCAAGGCATCCAGTTCGGCTGCCAGCAGTGGGCCGGCAGCGGCCACCTTGGCGAACTTGGCGACGCCATGGGTCGAGC > NC_002947/5653886‑5654029 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |