New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5825599	74 (1.160)	4 (0.070)	4/234	NT	5.5%	coding (696/813 nt)	thiG	thiazole synthase
	?	NC_002947	= 5825622	70 (1.190)					coding (673/813 nt)	thiG	thiazole synthase

GGGTGATCGGCGTATCGTGCGATTCAGTCATCAGTTGCTCTTACTTGATCAGACCATCCAGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGCGTGTTTCATGGCCTCGGCCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5825442‑5825599 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctcggccatcGCCCACGCCCAGCAGCCAGTGCTGATGGCCGAGGCCATGAAACACGCCATTGTCGCGGGTCGCATGGCCTACCTGGCTGGTCGTATGCCGAAGAAACTCTATGCCAGCGCCTCCTCGCCGCTGGATGGTCTGATCAAGTAAGAG  <  NC_002947/5825622‑5825479                                                                                                                                                                                                                                                                                                                GGGTGATCGGCGTATCGTGCGATTCAGTCATCAGTTGCTCTTACTTGATCAGACCATCCAGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGCGTGTTTCATGGCC                                                                                                                                                           >  4:46589/1‑149          GCGTATCGTGCGATTCAGTCATCAGTTGCTCTTACTTGATCAGACCATCCAGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGCGTGTTTCATGGCCTCGGCCATC                                                                                                                                                  <  3:46589/149‑1          GCGTATCGTGCGATTCAGTCATCAGTTGCTCTTACTTGATCAGACCATCCAGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCGGAGTACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGCGTGTTTCATGGCCTCGGCCAT                                                                                                                                                   >  7:218017/1‑148                 GTGCGATTCAGTCATCAGTTGCTCTTACTTGATCAGACCATCCAGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGCGTGTTTCATGGCCTCGGCCATCGCCCACG                                                                                                                                           >  4:151902/1‑149                                           ACTTGATCAGACCATCCAGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGCGTGTTTCATGGCCTCGGCCATCGCCCACGCCCAGCAGCCAGTGCTGATGGCCGA                                                                                                                  <  3:151902/148‑1                                                            AGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGCGTGTTTCATGGCCTCGGCCATCGCCCACGCCCAGCAGCCAGTGCTGATGGC                                                                                                                     >  4:38977/1‑128                                                            AGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGCGTGTTTCATGGCCTCGGCCATCGCCCACGCCCAGCAGCCAGTGCTGATGGC                                                                                                                     <  3:38977/128‑1                                                                                                                                                        GGCCATCGCGCACGCCCAGCAGCCAGTGCTGATGGCCGAGGCCATGAAACACGCCATTGTCGCGGGTCGCATGGCCTACCTGGCTGGTCGTATGCCGAAGAAACTCTATGCCAGCGCCTCCTCGCCGCTGGATGGTCTGATCAAGTAAG    <  4:401296/149‑1                                                                                                                                                        GGCCATCGCCCACGCCCAGCAGCCAGTGCTGATGGCCGAGGCCATGAAACACGCCATTGTCGCGGGTCGCATGGCCTACCTGGCTGGTCGTATGCCGAAGAAACTCTATGCCAGCGCCTCCTCGCCGCTGGATGGTCTGATCAAGTAA     <  2:102014/148‑1                                                                                                                                                        GGCCATCGCCCACGCCCAGCAGCCAGTGCTGATGGCCGAGGCCATGAAACACGCCATTGTCGCGGGTCGCATGGCCTACCTGGCTGGTCGTATGCCGAAGAAACTCTATGCCAGCGCCTCCTCGCCGCTGGATGGTCTGATCAAGT       >  2:399875/1‑146                                                                                                                                                        GGCCATCGCCCACGCCCAGCAGCCAGTGCTGATGGCCGAGGCCATGAAACACGCCATTGTCGCGGGTCGCATGGCCTACCTGGCTGGTC                                                                >  5:253894/1‑89                                                                                                                                                        GGCCATCGCCCACGCCCAGCAGCCAGTGCTGATGGCCGAGGCCATGAAACACGCCATTGTCGCGGGTCGCATGGCCTACCTGGCTGGTC                                                                <  6:253894/89‑1                                                                                                                                                         GCCATCGCCCTCTGCCAGCAGCCAGTGCTGATGGCCGAGGCGTTGAAACACGCCATTGTCGCGGGTCGCATGGCCTACCTGGCTTGTCGTATGCCGAAGAAACTCTATGCCAGCGCCTCCTCGCCGCTGGATGGTCTGATCAAGTAAGA   <  8:327908/149‑1                                                                                                                                                         GCCATCGCCCACGCCCAGCAGCCAGTGCTGATGGCCGAGGCCATGAAACACGCCATTGTCGCGGGTCGCATGGCCTACCTGGCTGGTCGTATGCCGAAGAAACTCTATGCCAGCGCCTCCTCGCCGCTGGATGGTCTGATCAAGTAAGt   <  2:130472/149‑2                                                                                                                                                          CCATCGCCCACGCCCAGCAGCCAGTGCTGATGGCCGAGGCCATGAAACACGCCATTGTCGCGGGTCGCATGGCCTACCTGGCTGGTCGTATGCCGAAGAAACTCTATGCCAGCGCCTCCTCGCCGCTGGATGGTCTGATCAAGTAAGAG  <  8:340421/149‑1                                                                                                                                                           CATCGCCCACGCCCAGCAGCCAGTGCTGATGGCCGAGGCCATGAAACACGCCATTGTCGCGGGTCGCATGGCCTACCTGGCTGGTCGTATGCCGAAGAAACTCTATGCCAGCGCCTCCTCGCCGCTGGATGGTCTGATCAAGTAAGAG  >  5:166700/1‑148                                                                                                                                                           CATCGCCCACGCCCAGCAGCCAGTGCTGATGGCCGAGGCCATGAAACACGCCATTGTCGCGGGTCGCATGGCCTACCTGGCTGGTCGTATGCCGAAGAAACTCTATGCCAGCGCCTCCTCGCCGCTGGATGGTC                >  2:182875/1‑134                                                                                                                                                           CATCGCCCACGCCCAGCAGCCAGTGCTGATGGCCGAGGCCATGAAACACGCCATTGTCGCGGGTCGCATGGCCTACCTGGCTGGTCGTATGCCGAAGAAACTCTATGCCAGCGCCTCCTCGCCGCTGGATGGTC                <  1:182875/134‑1                                                                                                                                                                                                                                                                                                                GGGTGATCGGCGTATCGTGCGATTCAGTCATCAGTTGCTCTTACTTGATCAGACCATCCAGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGCGTGTTTCATGGCCTCGGCCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5825442‑5825599 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctcggccatcGCCCACGCCCAGCAGCCAGTGCTGATGGCCGAGGCCATGAAACACGCCATTGTCGCGGGTCGCATGGCCTACCTGGCTGGTCGTATGCCGAAGAAACTCTATGCCAGCGCCTCCTCGCCGCTGGATGGTCTGATCAAGTAAGAG  <  NC_002947/5825622‑5825479

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.