New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5837869	58 (0.910)	4 (0.070)	4/238	NT	7.1%	coding (670/1371 nt)	PP_5116	hypothetical protein
	?	NC_002947	= 5837905	51 (0.850)					coding (706/1371 nt)	PP_5116	hypothetical protein

CTCAGAGCACGTAGCGAAGTCTTCCGCCACCTGTTCAACGGGCATCCTTACGGCAACCCTCTGGGCAGCACCGCTCAAGGTATCGAGGCCATTACCCCTGAGGACTTGCGGGCATTCCACCAACGCGCCTACAGCGCCAGCAACCTTGAGATGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5837716‑5837869 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgagatggCTTGGGCTTGTCCAGGCGAAAGGTCGCCTACCACGACCATCTCAAGGTTGCTGGCGCTGTAGGCGCGTTGGTGGAATGCCCGCAAGTCCTCAGGGGTAATGGCCTCGATACCTTGAGCGGTGCTGCCCAGAGGGTTGCCGTAAG  <  NC_002947/5837905‑5837762                                                                                                                                                                                                                                                                                                            CTCAGAGCACGTAGCGAAGTCTTCCGCCACCTGTTCAACGGGCATCCTTACGGCAACCCTCTGGGCAGCACCGCTCAAGGTATCGAGGCCATTACCCCTGAGGACTTGCGGGCATTCCACCAACGCGCCTACAGCGCCAGCAACCTTG                                                                                                                                                        <  7:366510/148‑1     GAGCACGTAGCGAAGTCTTCCGCCACCTGTTCAACGGGCATCCTTACGGCAACCCTCTGGGCAGCACCGCTCAAGGTATCGAGGCCATTACCCCTGAGGACTTGCGGGCATTCCACCAACGCGCCTACAGCGCCAGCAACCTTGAGATG                                                                                                                                                   >  7:211455/1‑149      AGCACGTAGCGAAGTCTTCCGCCACCTGTTCAACGGGCATCCTTACGGCAACCCTCTGGGCAGCACCGCTCAAGGTATCGAGGCCATTACCCCTGAGGACTTGCGGGCATTCCACCAACGCGCCTACAGCGCCAGCAACCTTGAGATGG                                                                                                                                                  <  7:188533/149‑1                                                                     CACCGCTCAAGGTATCGAGGCCATTACCCCTGAGGACTTGCGGGCATTCCACCAACGCGCCTACAGCGCCAGCAACCTTGAGATGGCTTGGGCTTGTCCAGGCGAAAGGTCGCCTACCACGACCATCTCAA                                                                                                     <  3:321252/131‑1                                                                     CACCGCTCAAGGTATCGAGGCCATTACCCCTGAGGACTTGCGGGCATTCCACCAACGCGCCTACAGCGCCAGCAACCTTGAGATGGCTTGGGCTTGTCCAGGCGAAAGGTCGCCTACCACGACCATCTCAA                                                                                                     >  4:321252/1‑131                                                                                                               GGCATTCCACCAACGCGCCTACAGCGCCAGCAACCTTGAGATGGCTTGGGCTTGTCCAGGCGAAAGGTCGCCTACCACGACCATC                                                                                                         <  7:326582/85‑1                                                                                                               GGCATTCCACCAACGCGCCTACAGCGCCAGCAACCTTGAGATGGCTTGGGCTTGTCCAGGCGAAAGGTCGCCTACCACGACCATC                                                                                                         >  8:326582/1‑85                                                                                                                                                       ATGGCTTGGGCTTGTCCAGGCGAAAGGTCGCCTACCACGACCATCTCAAGGTTGCTGGCGCTGTAGGCGCGTTGGTGGAATGCCCGCAAGTCCTCAGGGGTAATGGCCTCGATACCTTGAGCGGTGCTGCCCAGAGGGTTGCCGTAAG  >  4:106291/1‑148                                                                                                                                                       ATGGCTTGGGCTTGTCCAGGCGAAAGGTCGCCTACCACGACCATCTCAAGGTTGCTGGCGCTGTAGGCGCGTTGGTGGAATGCCCGCAAGTCCTCA                                                      >  5:277291/1‑96                                                                                                                                                       ATGGCTTGGGCTTGTCCAGGCGAAAGGTCGCCTACCACGACCATCTCAAGGTTGCTGGCGCTGTAGGCGCGTTGGTGGAATGCCCGCAAGTCCTCA                                                      <  6:277291/96‑1                                                                                                                                                                                                                                                                                                            CTCAGAGCACGTAGCGAAGTCTTCCGCCACCTGTTCAACGGGCATCCTTACGGCAACCCTCTGGGCAGCACCGCTCAAGGTATCGAGGCCATTACCCCTGAGGACTTGCGGGCATTCCACCAACGCGCCTACAGCGCCAGCAACCTTGAGATGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5837716‑5837869 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgagatggCTTGGGCTTGTCCAGGCGAAAGGTCGCCTACCACGACCATCTCAAGGTTGCTGGCGCTGTAGGCGCGTTGGTGGAATGCCCGCAAGTCCTCAGGGGTAATGGCCTCGATACCTTGAGCGGTGCTGCCCAGAGGGTTGCCGTAAG  <  NC_002947/5837905‑5837762

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.