New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5839561 =	72 (1.130)	4 (0.070)	4/244	NT	5.6%	coding (931/993 nt)	yheT	putative hydrolase
	?	NC_002947	5839603 =	66 (1.070)					coding (973/993 nt)	yheT	putative hydrolase

AACCCCCGCGGTGGGTGGCACCGGCAATGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGGGCGCGCAGCCTTTACCAATTCGCGGGCTAGCTACCGTCCACCAGCCACTGCGGAATCCGTCGTTCCAAGTAGTACCCCGGATTTCGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5839712‑5839561 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcagTGGCTGGTGGACGGTAGCTAGCCCGCGAATTGGTAAAGGCTGCGCGCCCCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCATTGCCGGTGCCACCCACCGCGGGGGTTCAACCCGGTCTGCTTACTCGCCGGTGGCCACCGCATG  >  NC_002947/5839603‑5839749                                                                                                                                                                                                                                                                                                             AACCCCCGCGGTGGGTGGCACCGGCAATGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGGGCGCGCAGCCTTTACCAATTCGCGGGCTAGCTACCGTCCACCAGCCACTGCGGAATCCGTCGTTCCAAGTAGTACCCCGGATTTCG                                                                                                                                                        >  1:295552/1‑149  ACCCCCGCGGTGGGTGGCACCGGCAATGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGGGCGCGCAGCCTTTACCAATTCGCGGGCTAGCTACCGTCCACCAGCCACTGCGGAATCCGTCGTTCCAAGTAGTACCCCGGATTTCGC                                                                                                                                                       <  5:72742/149‑1  ACCCCCGCGGTGGGTGGCACCGGCAATGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGGGCGCGCAGCCTTTACCAATTCGCGGGCTAGCTACCGTCCACCAGCCACTGCGGAATCCGTCGTTCCAAGTAGTACCCCGGATTTC                                                                                                                                                         <  1:198691/147‑1  ACCCCCGCGGTGGGTGGCACCGGCAATGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGGGCGCGCAGCCTTTACCAATTCGCGGGCTAGCTACCGTCCACCAGCCACTGCGGAATCCGTCGTTCCAAGTAGTACCCCGGATTTC                                                                                                                                                         >  2:198691/1‑147   CCCCCGCGGTGGGTGGCACCGGCAATGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGGGCGCGCAGCCTTTACCAATTCGCGGGCTAGCTACCGTCCACCAGCCACTGCGGAATCCGTCGTTCCAAGTAGTACCCCGGATTTCGCA                                                                                                                                                      <  7:62096/149‑1    CCCCGCGGTGGGTGGCACCGGCAATGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGGGCGCGCAGCCTTTACCAATTCGCGGGCTAGCTACCGTCCACCAGCCACTGCGGAATCCGTCGTTCCAAGTAGTACCCCGGATTTCGCAG                                                                                                                                                     <  1:293090/149‑1          GGTGGGTGGCACCGGCAATGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGGGCGCGCAGCCTTTACCAATTCGCGGGCTAGCTACCGTCCACCAGCCACTGCGGAATCCGTCGTTCCAAGTAGTACCCCGGATTTCG                                                                                                                                                        >  5:192657/1‑140          GGTGGGTGGCACCGGCAATGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGGGCGCGCAGCCTTTACCAATTCGCGGGCTAGCTACCGTCCACCAGCCACTGCGGAATCCGTCGTTCCAAGTAGTACCCCGGATTTCG                                                                                                                                                        <  6:192657/140‑1                                                                                                              ACTGCGGAATCCGTCGTTCCAAGTAGTACCCCGGATTTCGCAGTGGCTGGTGGACGGTAGCTAGCCCGCGAATTGGTAAAGGCTGCGCGCCCCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCATTGCCGGTGCCACCCACCGCGGG                                           >  7:190102/1‑149                                                                                                              ACTGCGGAATCCGTCGTTCCAAGTAGTACCCCGGATTTCGCAGTGGCTGGTGGACGGTAGCTAGCCCGCGAATTGGTAAAGGCTGCGCGCCCCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCATTGCCGGTGCCACCCACCGCGGG                                           <  8:190102/149‑1                                                                                                              ACTGCGGAATCCGTCGTTCCAAGTAGTACCCCGGATTTC                                                                                                                                                         >  4:93006/1‑39                                                                                                                  CGGAATCCGTCGTTCCAAGTAGTACCCCGGATTTCGCAGTGGCTGGTGGACGGTAGCTAGCCCGCGAATTGGTAAAGGCTGCGCGCCCCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCATTG                                                               <  7:312165/125‑1                                                                                                                  CGGAATCCGTCGTTCCAAGTAGTACCCCGGATTTCGCAGTGGCTGGTGGACGGTAGCTAGCCCGCGAATTGGTAAAGGCTGCGCGCCCCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCATTG                                                               >  8:312165/1‑125                                                                                                                                                    CGCAGTGGCTGGTGGACGGTAGCTAGCCCGCGAATTGGTAAAGGCTGCGCGCCCCCTGT‑GTAGCGGGCATGCCCGCGAACACCGGCATTGCCGGTGCCACCCACCGCGGGGGTTCAACCCGGTCTGCTTACTCGCCGGTGGCCACCGCA    >  6:164314/1‑149                                                                                                                                                       AGTGGCTGGTGGACGGTAGCTAGCCCGCGAATTGGTAAAGGCTGCGCGCCCCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCATTGCCGGTGCCACCCACCGCGGGGGTTCAACCCGGTCTGCTTACTCGCCGGTGGCCACCGCATG  <  1:324420/149‑1                                                                                                                                                                                                                                                                                                             AACCCCCGCGGTGGGTGGCACCGGCAATGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGGGCGCGCAGCCTTTACCAATTCGCGGGCTAGCTACCGTCCACCAGCCACTGCGGAATCCGTCGTTCCAAGTAGTACCCCGGATTTCGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5839712‑5839561 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcagTGGCTGGTGGACGGTAGCTAGCCCGCGAATTGGTAAAGGCTGCGCGCCCCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCATTGCCGGTGCCACCCACCGCGGGGGTTCAACCCGGTCTGCTTACTCGCCGGTGGCCACCGCATG  >  NC_002947/5839603‑5839749

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.