New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5850864	62 (0.970)	4 (0.070)	4/238	NT	6.4%	coding (1569/1842 nt)	ilvD	dihydroxy‑acid dehydratase
	?	NC_002947	= 5850932	58 (0.970)					coding (1637/1842 nt)	ilvD	dihydroxy‑acid dehydratase

GACATCGTCATCATCCGCTACGAAGGCCCGAAAGGCGGCCCGGGCATGCAAGAAATGCTCTACCCGACCTCGTACCTCAAGTCCAAAGGCCTGGGCAAGGCCTGCGCCCTGCTCACCGACGGTCGCTTCTCGGGCGGTACCTCGGGCCTGTCGATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5850709‑5850864 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtcgatcAGTACCTTGTCGCCGTCGCGCACCAGGCCGATGGCGCCGCCCGCCGCGGCCTCTGGCGAGGCGTGGCCGATCGACAGGCCCGAGGTACCGCCCGAGAAGCGACCGTCGGTGAGCAGGGCGCAGGCCTTGCCCAGGCCTTTGGACTT  <  NC_002947/5850932‑5850787                                                                                                                                                                                                                                                                                                                GACATCGTCATCATCCGCTACGAAGGCCCGAAAGGCGGCCCGGGCATGCAAGAAATGCTCTACCCGACCTCGTACCTCAAGTCCAAAGGCCTGGGCAAGGCCTGCGCCCTGCTCACCGACGGTCGCTTCTCGGGCGGTACCTCGGGCCT                                                                                                                                                           <  8:100961/149‑1   CATCGTCATCATCCGCTACGAAGGCCCGAAAGGCGGCCCGGGCATGCAAGAAATGCTCTACCCGACCTCGTACCTCAAGTCCAAAGGCCTGGGCAAGGCCTGCGCCCTGCTCACCGACGGTCGCTTCTCGGGCGGTACCTCGGGCCTGT                                                                                                                                                         <  3:383030/149‑1                 GCTACGAAGGCCCGAAAGGCGGCCCGGGCATGCAAGAAATGCTCTACCCGACCTCGTACCTCAAGTCCAAAGGCCTGGGCAAGGCCTGCGCCCTGCTCACCGACGGTCGCTTCTCGGGCGGTACCTCGGGCCTGTCGATC                                                                                                                                                    <  1:151021/140‑1                 GCTACGAAGGCCCGAAAGGCGGCCCGGGCATGCAAGAAATGCTCTACCCGACCTCGTACCTCAAGTCCAAAGGCCTGGGCAAGGCCTGCGCCCTGCTCACCGACGGTCGCTTCTCGGGCGGTACCTCGGGCCTGTCGATC                                                                                                                                                    >  2:151021/1‑140                                              ATGCAAGAAATGCACTACCCGACCTCGTACCTCAAGTCCAAAGGCCTGGGCAAGGCCTGCGCCCTGCTCACCGACGGTCGCTTCTCGGGCGGTACCTCGGGCCTGTCGATCAGTACCTTGTCGCCGTCGCGCACCAGGCCGATGGCGCC                                                                                                              >  5:97505/1‑149                                                           TCTACCCGACCTCGTACCTCAAGTCCAAAGGCCTGGGCAAGGCCTGCGCCCTGCTCACCGACGCTCGCTTCTCGGGCGGTACCTCGGCCCTGTCGATCAGTACCTAGTCGCCGTCGCGCCACAGGCCCATGGCGCAGCCCGCCGCGGC                                                                                                  >  4:65531/1‑148                                                                                     aatGGCCTGGGCAAGGCCTGCGCCCTGCTCACCGACGGTCGCTTCTCGGGCGGTACCTCGGGCCTGTCGATCACTACCTTGTCGCCGTCGCGCACCAGGCCGATGGCGCCGCCCGCCGCGGCCTCTGGCGAGGCGTGGCCGATCGACAG                                                                       <  3:65531/146‑1                                                                                      AAGGCCTGGGCAAGGCCTGCGCCCTGCTCACCGACGGTCGCTTCTCGGGCGGTACCTCGGGCCTGTCGATCAGTACCTTGTCGCCGTCGCGCACCAGGCCGATGGCGCCGCCCGCCGCGGCCTCTGGCGAGGCGTGGCCGATCGACAGG                                                                      <  6:97505/149‑1                                                                                                                                                        CGATCAGTACCTTGTCGCCGTCGCGCACCAGGCCGATGGCGCCGCCCGCCGCGGCCTCTGGCGAGGCGTGGCCGATCGACAGGCCCGAGGTACCGCCCGAGAAGCGACCGTCGGTGAGCAGGGCGCAGGCCTTGCCCAGGCCTTTGGAC    >  5:225865/1‑149                                                                                                                                                         GATCAGTACCTTGTCGCCGTCGCGCACCAGGCCGATGGCGCCGCCCGCCGCGGCCTCTGGCGAGGCGTGGCCGATCGACAGGCCCGAGGTACCGCCCGAGAAGCGACCGTCGGTGAGCAGGGCGCAGGCCTTGCCCAGGCCTTTG       <  3:72315/145‑1                                                                                                                                                         GATCAGTACCTTGTCGCCGTCGCGCACCAGGCCGATGGCGCCGCCCGCCGCGGCCTCTGGCGAGGCGTGGCCGATCGACAGGCCCGAGGTACCGCCCGAGAAGCGACCGTCGGTGAGCAGGGCGCAGGCCTTGCCCAGGCCTTTG       >  4:72315/1‑145                                                                                                                                                          ATCAGTACCTTGTCGCCGTCGCGCACCAGGCCGATGGCGCCGCCCGCCGCGGCCTCTGGCGAGGCGTGGCCGATCGACAGGCCCGAGGTACCGCCCGAGAAGCGACCGTCGGTGAGCAGGGCGCAGGCCTTGCCCAGGCCTTTGGACTT  <  3:8655/149‑1                                                                                                                                                           TCAGTACCTTGTCGCCGTCGCGCACCAGGCCGATGGCGCCGCCCGCCGCGGCCTCTGGCGAGGCGTGGCCGATCGACAGGCCCGAGGTACCGCCCGAGAAGCGACCGTCGGTGAGCAGGGCGCAGGCCTTGCCCAGGCCTTTGGACTT  >  7:237839/1‑148                                                                                                                                                                                                                                                                                                                GACATCGTCATCATCCGCTACGAAGGCCCGAAAGGCGGCCCGGGCATGCAAGAAATGCTCTACCCGACCTCGTACCTCAAGTCCAAAGGCCTGGGCAAGGCCTGCGCCCTGCTCACCGACGGTCGCTTCTCGGGCGGTACCTCGGGCCTGTCGATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5850709‑5850864 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtcgatcAGTACCTTGTCGCCGTCGCGCACCAGGCCGATGGCGCCGCCCGCCGCGGCCTCTGGCGAGGCGTGGCCGATCGACAGGCCCGAGGTACCGCCCGAGAAGCGACCGTCGGTGAGCAGGGCGCAGGCCTTGCCCAGGCCTTTGGACTT  <  NC_002947/5850932‑5850787

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.