New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5938181	60 (0.940)	5 (0.080)	3/240	NT	8.1%	coding (742/2721 nt)	rbbA	ribosome‑associated ATPase
	?	NC_002947	= 5938213	57 (0.940)					coding (774/2721 nt)	rbbA	ribosome‑associated ATPase

GCTACCGCCTACATGGAAGAAGCCGAACAGTTCGAGCATTGCCTGATGCTCGATGGCGGCCGGCTGCTGGCCGCCGGCCCTAGCCACGAACTGGCTGCAGTCACCTCGAGCGGCAAACTGGATGATGCCTTTACCCATTACCAGGGCGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5938031‑5938181 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcggCGGGATTGCCAGTGGTTGATGCTGCGCCTTGCCCGCGCCCTGGTAATGGGTAAAGGCATCATCCAGTTTGCCGCTCGAGGTGACTGCAGCCAGTTCGTGGCTAGGGCCGGCGGCCAGCAGCCGGCCGCCATCGAGCATCAGGCAA  <  NC_002947/5938213‑5938069                                                                                                                                                                                                                                                                                                          GCTACCGCCTACATGGAAGAAGCCGAACAGTTCGAGCATTGCCTGATGCTCGATGGCGGCCGGCTGCTGGCCGCCGGCCCTAGCCACGAACTGGCTGCAGTCACCTCGAGCGGCAAACTGGATGATGCCTTTACCCATTACCAGGGCGC                                                                                                                                                     >  3:382644/1‑149     CCGCCTACATGGAAGAAGCCGAACAGTTCGAGCATTGCCTGATGCTCGATGGCGGCCGGCTGCTGGCCGCCGGCCCTAGCCACGAACTGGCTGCAGTCACCTCGAGCGGCAAACTGGATGATGCCTTTACCCATTACCAGGGCGCGG                                                                                                                                                   <  7:146643/147‑1             ATGGAAGAAGCCGAACAGTTCGAGCATTGCCTGATGCTCGATGGCGGCCGGCTGCTGGCCGCCGGCCCTAGCCACGAACTGGCTGCAGTCACCTCGAGCGGCAAACTGGATGATGCCTTTACCCATTACCAGGGCGC                                                                                                                                                     >  1:300511/1‑137             ATGGAAGAAGCCGAACAGTTCGAGCATTGCCTGATGCTCGATGGCGGCCGGCTGCTGGCCGCCGGCCCTAGCCACGAACTGGCTGCAGTCACCTCGAGCGGCAAACTGGATGATGCCTTTACCCATTACCAGGGCGC                                                                                                                                                     <  2:300511/137‑1                                              ATGCTCGATGGCGGCCGGCTGCTGGCCGCCGGCCCTAGCCACGAACTGGCTGCAGTCACCTCGAGCGGCAAACTGGATGATGCCTTTACCCATTACCAGGGCGCGGCGGGATTGCCAGTGGTTGATGCTGCGCCTTGCCCGCGCCCTG                                                                                                         <  5:397399/148‑1                                                                                                TGCAGTCACCTCGAGCGGCAAACTGGATGATGCCTTTACCCATTACCAGGGCGCGGCGGGATTGCCAGTGGTTTATGCTGCGCCTTGCCCGCGCCCTGGTAATGGGT                                                                                                >  2:182521/1‑107                                                                                                TGCAGTCACCTCGAGCGGCAAACTGGATGATGCCTTTACCCATTACCAGGGCGCGGCGGGATTGCCAGTGGTTGATGCTGCGCCTTGCCCGCGCCCTGGTAATGGGT                                                                                                <  1:182519/107‑1                                                                                                TGCAGTCACCTCGAGCGGCAAACTGGATGATGCCTTTACCCATTACCAGGGCGCGGCGGGATTGCCAGTGGTTGATGCTGCGCCTTGCCCGCGCCCTGGTAATGGGT                                                                                                <  1:182521/107‑1                                                                                                TGCAGTCACCTCGAGCGGCAAACTGGATGATGCCTTTACCCATTACCAGGGCGCGGCGGGATTGCCAGTGGTTGATGCTGCGCCTTGCCCGCGCCCTGGTAATGGGT                                                                                                >  2:182519/1‑107                                                                                                                                                 GGCGCGGCGGGATTGCCAGTGGTTGATGCTGCGCCTTGCCCGCGCCCTGGTAATGGGTAAAGGCATCATCCAGTTTGCCGCTCGAGGTGACTGCAGCCAGTTCGTGGCTAGGGCCGGCGGCCAGCAGCCGGCCGCCATCAAGCATCAGG     <  2:237725/149‑1                                                                                                                                                    GCGGCGGGATTGCCAGTGGTTGATGCTGCGCCTTGCCCGCGCCCTGGTAATGGGTAAAGGCATCATCCAGTTTGCCGCTCGAGGTGACTGCAGCCAGTTCGTGGCTAGGGCCGGCGGCCAGCAGCCCGCCGCCATCGAGCATCAGGCAA  >  8:127576/1‑149                                                                                                                                                                                                                                                                                                          GCTACCGCCTACATGGAAGAAGCCGAACAGTTCGAGCATTGCCTGATGCTCGATGGCGGCCGGCTGCTGGCCGCCGGCCCTAGCCACGAACTGGCTGCAGTCACCTCGAGCGGCAAACTGGATGATGCCTTTACCCATTACCAGGGCGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5938031‑5938181 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcggCGGGATTGCCAGTGGTTGATGCTGCGCCTTGCCCGCGCCCTGGTAATGGGTAAAGGCATCATCCAGTTTGCCGCTCGAGGTGACTGCAGCCAGTTCGTGGCTAGGGCCGGCGGCCAGCAGCCGGCCGCCATCGAGCATCAGGCAA  <  NC_002947/5938213‑5938069

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.