| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5946319 = | 71 (1.110) | 5 (0.080) | 5/246 | NT | 6.7% | coding (690/1467 nt) | ubiD | 3‑octaprenyl‑4‑hydroxybenzoate carboxy‑lyase |
| ? | NC_002947 | 5946371 = | 71 (1.150) | coding (638/1467 nt) | ubiD | 3‑octaprenyl‑4‑hydroxybenzoate carboxy‑lyase | |||||
TGATCGGCCGCAACAAGGTGATCATGCGCTGGCTCAGCCATCGTGGCGGCGCCCTCGATTACCGAGAGTGGTGCGAGAAGAACCCCGGCCAGCCGTTTCCGGTCGCCGTGGCCCTGGGCGCTGACCCAGCGACCATTCTCGGCGCGGTGACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5946470‑5946319‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaccGGAAACGGCTGGCCGGGGTTCTTCTCGCACCACTCTCGGTAATCGAGGGCGCCGCCACGATGGCTGAGCCAGCGCATGATCACCTTGTTGCGGCCGATCACCTGCTGGCGGTAGATGCCCAGG > NC_002947/5946371‑5946493 TGATCGGCCGCAACAAGGTGATCATGCGCTGGCTCAGCCATCGTGGCGGCGCCCTCGATTACCGAGAGTGGTGCGAGAAGAACCCCGGCCAGCCGTTTCCGGTCGCCGTGGCCCTGGGCGCTGACCCAGCGACCATTCTCGGCGCGGTG < 4:179913/149‑1 GATCGGCCGCAACAAGGTGATCATGCGCTGGCTCAGCCATCGTGGCGGCGCCCTCGATTACCGAGAGTGGCGCGAGAAGAACCCCGGCCAGCCGTTTCCGGTCGCCGTGGCCCTGGGCGCTGACCCAGCGACCATTCTCGGCGCGGTGA > 4:132005/1‑149 TCGGCCGCAACAAGGTGATCATGCGCTGGCTCAGCCATCGTGGCGGCGCCCTCGATTACCGAGAGTGGTGCGAGAAGAACCCCGGCCAGCCGTTTCCGGTCGCCGTGGCCCTGGGCGCTGACCCAGCGACCATTCTCGGCGCGGTGACC > 3:298336/1‑149 CGGTCGCCGTGGCCCTGGGCGCTGACCCAGCGACCATTCTCGGCGCGGTGACCGGAAACGGCTGGCCGGGGTTCTTCTCGCACCACTCTCGGTAATCGAGGGCGCCGCCACGATGGCTGAGCCAGCGCATGATCACCTTGTTGCGGCC > 3:208603/1‑148 GGTCGCCGTGGCCCTGGGCGCTGACCCAGCGACCATTCTCGGCGCGGTGACCGGAAACGGCTGGCCGGGGTTCTTCTCGCACCACTCTCGGTAATCGAGGGCGCCGCCACGATGGCTGAGCCAGCGCATGATCACCTTGTTGCGGCCGA > 6:379003/1‑149 CCGTGGCCCTGGGCGCTGACCCAGCGACCATTCTCGGCGCGGTGACCGGAAACGGCTGGCCGGGGTTCTTCTCGCACCACTCTCGGTAATCGAGGGCGCCGCCACGA > 7:308169/1‑107 CCGTGGCCCTGGGCGCTGACCCAGCGACCATTCTCGGCGCGGTGACCGGAAACGGCTGGCCGGGGTTCTTCTCGCACCACTCTCGGTAATCGAGGGCGCCGCCACGA < 8:308169/107‑1 CAGCGACCATTCTCGGCGCGGTGACCGGAAACGGCTGGCCGGGGTTCTTCTCGCACCACTCTCGGTAATCGAGGGCGCCGCCACGATGGCTGAGCCAGCGCATGATCACCTTGTTGCGGCCGATCACCTGCTGGCGGTAGATGCCCAGG < 4:208603/149‑1 TGATCGGCCGCAACAAGGTGATCATGCGCTGGCTCAGCCATCGTGGCGGCGCCCTCGATTACCGAGAGTGGTGCGAGAAGAACCCCGGCCAGCCGTTTCCGGTCGCCGTGGCCCTGGGCGCTGACCCAGCGACCATTCTCGGCGCGGTGACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5946470‑5946319‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaccGGAAACGGCTGGCCGGGGTTCTTCTCGCACCACTCTCGGTAATCGAGGGCGCCGCCACGATGGCTGAGCCAGCGCATGATCACCTTGTTGCGGCCGATCACCTGCTGGCGGTAGATGCCCAGG > NC_002947/5946371‑5946493 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |