New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 172086355 (0.860)5 (0.080) 5/236 NT 8.6% coding (603/1101 nt) PP_1516 RND membrane fusion protein
?NC_002947 = 1720875 55 (0.930)coding (615/1101 nt) PP_1516 RND membrane fusion protein

CAAGGCCGAGTTCGATGTGGCGGGCAACCAGGCCGAATATGCCGTATTGCGTGCGCCGCAGGCCGGGGTGATCGCCAAGCGCCAGGTTGAAGTGGGCCAGGTGGTCGCCGCCGGGCAGACCGTGTTCACCCTTGCCGCCGATGGCGAGCGAGAAGTGGCCATCGGCCTGCCGGAGCAGCAGTTCGCCCGCTTCGCTGTGGGCCAACCGGTGAGCGTGGAGCTGTGGTCGCACCCGCAGGCGCGTTTCCAGGGGCGCATTCGCGAGCTGTCACCGGCCGCCGACCCGCGCTCGC  >  NC_002947/1720719‑1721011
                                                                                                                                                |                                                                                                                                                    
cAAGGCCGAGTTCGATGTGGCGGGCAACCAGGCCGAATATGCCGTATTGCGTGCGCCGCAGGCCGGGGTGATCGCCAAGCGCCAGGTTGAAGTGGTCCAGGTGGTCGCCGCCGGGCAGACCGTGTTCACCCTTGCCGCCGATGgcgagc                                                                                                                                                  <  2:385029/149‑1 (MQ=255)
   ggCCGAGTTCGATGTGGCGGGCAACCAGGCCGAATATGCCGTATTGCGTGCGCCGCAGGCCGGGGTGATCGCCAAGCGCCAGGTTGAAGTGGGCCAGGTGGTCGCCGCCGGGCAGACCGTGTTCACCCTTGCCGCCGATGgcgagc                                                                                                                                                  >  8:49860/1‑146 (MQ=255)
    gCCGAGTTCGATGTGGCGGGCAACCAGGCCGAATATGCCGTATTGCGTGCGCCGCAGGCCGGGGTGATCGCCAAGCGCCAGGTTGAAGTGGGCCAGGTGGTCGCCGCCGGGCAGACCGTGTTCACCCTTGCCGCCGATGGcgagcgag                                                                                                                                               >  4:374032/1‑148 (MQ=255)
      cGAGTTCGATGTGGCGGGCAACCAGGCCGAATATGCCGTATTGCGTGCGCCGCAGGCCGGGGTGATCGCCAAGCGCCAGGTTGAAGTGGGCCAGGTGGTCGCCGCCGGGCAGACCGTGTTCACCCTTGCCGCCGATGGCGAGCGAGAAg                                                                                                                                            >  5:263324/1‑149 (MQ=255)
       gAGTTCGATGTGGCGGGCAACCAGGCCGAATATGCCGTATTGCGTGCGCCGCAGGCCGGGGTGATCGCCAAGCGCCAGGTTGAAGTGGGCCAGGTGGTCGCCGCCGGGCAGACCGTGTTCACCCTTGCCGCCGATGGCGAGCGAGAAGt                                                                                                                                           >  6:256376/1‑149 (MQ=255)
         gTTCGATGTGGCGGGCAACCAGGCCGAATATGCCGTATTGCGTGCGCCGCAGGCCGGGGTGATCGCCAAGCGCCAGGTTGAAGTGGGCCAGGTGGTCGCCGCCGGGCAGACCGTGTTCACCCTTGCCGCCGATGGCGAGCGAGAAGTGg                                                                                                                                         >  8:370557‑M2/1‑148 (MQ=255)
              aTGTGGCGGGCAACCAGGCCGAATATGCCGTATTGCGTGCGCCGCAGGCCGGGGTGATCGCCAAGCGCCAGGTTGAAGTGGGCCAGGTGGTCGCCGCCGGGCAGACCGTGTTCACCCTTGCCGCCGATGGCGAGCGAGAAGTGgccatc                                                                                                                                    >  1:231341‑M2/1‑143 (MQ=255)
                 tgGCGGGCAACCAGGCCGAATATGCCGTATTGCGTGCGCCGCAGGCCGGGGTGATCGCCAAGCGCCAGGTTGAAGTGCGCCAGGTGGTCGCCGCCGGGCAGACCGTGTTCACCCTTGCCGCCGATGGCGAGCGAGAAGTGgccatcggc                                                                                                                                 <  1:227937‑M2/149‑10 (MQ=255)
                 tgGCGGGCAACCAGGCCGAATATGCCGTATTGCGTGCGCCGCAGGCCGGGGTGATCGCCAAGCGCCAGGTTGAAGTCGGCCAGGTGGTCGCCGCCGGGCAGACCGTGTTCACCCTTGCCGCCGATGGCcacttctcgctcgccatcgg                                                                                                                                  <  5:399166‑M1/148‑21 (MQ=255)
                     gggCAACCAGGCCGAATATGCCGTATTGCGTGCGCCGCAGGCCGGGGTGATCGCCAAGCGCCAGGTTGAAGTGGGCCAGGTGGTCGCCGCCGGGCAGACCGTGTTCACCCTTGCCGCCGATGGCcacttctcgctcgccatcggcggc                                                                                                                              >  5:376737‑M1/1‑124 (MQ=255)
                     gggCAACCAGGCCGAATATGCCGTATTGCGTGCGCCGCAGGCCGGGGTGATCGCCAAGCGCCAGGTTGAAGTGGGCCAGGTGGTCGCCGCCGGGCAGACCGTGTTCACCCTTGCCGCCGATGGCGAGCGAGAAGTGGCCATCGGCCTGc                                                                                                                             >  6:12974/1‑149 (MQ=255)
                      ggCAACCAGGCCGAATATGCCGTATTGCGTGCGCCGCAGGCCGGGGTGATCGCCAAGCGCCAGGTTGAAGTGGGCCAGGTGGTCGCCACCGGGCAGACCGTGTTCACCCTTGCCGCCGATGGCGAGCGAGAAGTGGCCATCGGCCTGcc                                                                                                                            <  2:271003/149‑1 (MQ=255)
                        cAACCAGGCCGAATATGCCGTATTGCGTGCGCCGCAGGCCGGGGTGATCGCCAAGCGCCAGGTTGAAGTGGGCCAGGTGGTCGCCGCCGGGCAGACCGTGTTCACCCTTGCCGCCGATGGCGAGCGAGAAGTGGCCATCGGCCTGCCgg                                                                                                                          <  6:250289/149‑1 (MQ=255)
                           ccAGGCCGAATATGCCGTATTGCGTGCGCCGCAGGCCGGGGTGATCGCCAAGCGCCAGGTTGAAGTGGGCCAGGTGGTCGCCGCCGGGCAGACCGTGTTCACCCTTGCCGCCGATGGCGAGCGAGAAGTGGCCATCGGCCTGCCGGag                                                                                                                        >  8:9091/1‑148 (MQ=255)
                            cAGGCCGAATATGCCGTATTGCGTGCGCCGCAGGCCGGGGTGATCGCCAAGCGCCAGGTTGAAGTGGGCCAGGTGGTCGCCGCCGGGCAGACCGTGTTCACTCTTGCCGCCGATGGCGAGCGAGAAGTGGCCATCGGCCTGCCGGagca                                                                                                                      <  5:166458/149‑1 (MQ=255)
                             aGGCCGAATATGCCGTATTGCGTGCGCCGCAGGCCGGGGTGATCGCCAAGCGCCTGGTTGAAGTGGGCCAGGTGGTCGCCGCCGGGCAGACCGTGTTCGCCCTTGCCGCCGAGGGCGCGCGAGGCGTGGCGATGGGCCTGCCGGagcgg                                                                                                                     >  8:366335/1‑147 (MQ=255)
                             aGGCCGAATATGCCGTATTGCGTGCGCCGCAGGCCGGGGTGATCGCCAAGCGCCAGGTTGAAGTGGGCCAGGTGGTCGCCGCCGGGCAGACCGTGTTCACCCTTGCCGCCGATGGCGAGCGAGAAGTGGCCATCGGCCTGCCGGagcag                                                                                                                     <  5:256376/149‑1 (MQ=255)
                                    atatGCCGTATTGCGTGCGCCGCAGGCCGGGGTGATCGCCAAGCGCCAGGTTGAAGTGGGCCAGGTGGTCGCCGCCGGGCAGACCGTGTTCACCCTTGCCGCCGATGGCCACTTCTCGCTCgccatcggcggcaagggtgaacacggtc                                                                                                              >  6:376737‑M2/1‑121 (MQ=255)
                                       tGCCGTATTGCGTGCGCCGCAGGCCGGGGTGATCGCCAAGCGCCAGGTTGAAGTGGGCCAGGTGGTCGCCGCCGGGCAGACCGTGTTCACCCTTGCCGCCGATGGCGAGCGAGAAGTGGCCATCGGCCTGCCGGAGCAGCAGTTCGcc                                                                                                            <  5:345699/148‑1 (MQ=255)
                                        gCCGTATTGCGTGCGCCGCAGGCCGGGGTGATCGCCAAGCGCCAGGTTGAAGTGGGCCAGGTGGTCGCCGCCGGGCAGACCGTGTTCACCCTTGCCGCCGATGGCGAGCGAGAAGTGGCCATCGGCCTGCCGGAGCAGCAGTTCGCCCg                                                                                                          >  4:338782/1‑149 (MQ=255)
                                         ccGTATTGCGTGCGCCGCAGGCCGGGGTGATCGCCAAGCGCCAGGTTGAAGTGGGCCAGGTGGTCGCCGCCGGGCAGACCGTGTTCACCCTTGCCGCCGATGgcgagc                                                                                                                                                  <  7:252259/108‑1 (MQ=255)
                                         ccGTATTGCGTGCGCCGCAGGCCGGGGTGATCGCCAAGCGCCAGGTTGAAGTGGGCCAGGTGGTCGCCGCCGGGCAGACCGTGTTCACCCTTGCCGCCGATGgcgagc                                                                                                                                                  >  8:252259/1‑108 (MQ=255)
                                                  gtgcgCCGCAGGCCGGGGTGATCGCCAAGCGCCAGGTTGAAGTGGGCCAGGTGGTCGCCGCCGGGCAGACCGTGTTCACCCTTGCCGCCGATGGCGAGCGAGAAGTGGCCATCGGCCTGCCGGAGCAGCAGTTCGCCCGCTTCGCtgtg                                                                                                <  7:9091/149‑1 (MQ=255)
                                                   tgcgCCGCAGGCCGGGGTGATCGCCAAGCGCCAGGTTGAAGTGGGCCAGGTGGTCGCCGCCGGGCAGACCGTGTTCACCCTTGCCGCCGATGGCGAGGGAGAAGTGGCCATCGGCCTGCCGGAGCAGCAGTTCGCCCGCTTCGCTGTgg                                                                                               <  2:227937/149‑1 (MQ=255)
                                                   tgcgCCGCAGGCCGGGGTGATCGCCAAGCGCCAGGTTGAAGTGGGCCAGGTGGTCGCCGCCGGGCAGACCGTGTTCACCCTTGCCGCCGATGGCGAGCGAGAAGTGGCCATCGGCCTGCCGGAGCAGCAGTTCGCCCGCTTCGCTGTgg                                                                                               <  3:183836/149‑1 (MQ=255)
                                                     cgccgcAGGCCGGGGTGATCGCCAAGCGCCAGGTTGAAGTGGGCCAGGTGGTCGCCGCCGGGCAGACCGTGTTCACCCTTGCCGCCGATGGCGAGCGAGAAGTGGCCATCGGCCTGCCGGAGCAGCAGTTCGCCCGCTTCGCTGTggg                                                                                              <  7:79093/148‑1 (MQ=255)
                                                     cgccgcAGGCCGGGGTGATCGCCAAGCGCCAGGTTGAAGTGGGCCAGGTGGTCGCCGCCGGGCAGACCGTGTTCACCCTTGCCGCCGATGGCGAGCGAGAAGTGGCCATCGGCCTGCCGGAGCAGCAGTTCGCCCGCTTCGCTGTggg                                                                                              <  4:14659/148‑1 (MQ=255)
                                                         gcAGGCCGGGGTGATCGCCAAGCGCCAGGTTGAAGTGGGCCAGGTGGTCGCCGCCGGGCAGACCGTGTTCACCCTTGCCGCCGATGGCGAGCGAGAAGTGGCCATCGGCCTGCCGGAGCAGCAGTTCGCCCGCTTCGCTGTGGGCCAAc                                                                                         >  8:42159/1‑149 (MQ=255)
                                                             gCCGGGGTGATCGCCAAGCGCCAGGTTGAAGTGGGCCAGGTGGTCGCCGCCGGGCAGACCGTGTTCACCCTTGCCGCCGATGGCGAGCGAGAAGTGGCCATCGGCCTGCCGGAGCAGCAGt                                                                                                                 <  5:40049/121‑1 (MQ=255)
                                                             gCCGGGGTGATCGCCAAGCGCCAGGTTGAAGTGGGCCAGGTGGTCGCCGCCGGGCAGACCGTGTTCACCCTTGCCGCCGATGGCGAGCGAGAAGTGGCCATCGGCCTGCCGGAGCAGCAGt                                                                                                                 >  6:40049/1‑121 (MQ=255)
                                                             gCCGGGGTGATCGCCAAGCGCCAGGTTGAAGTGGGCCAGGTGGTCGCCGCCGGGCAGACCGTGTTCACCCTTGCCGCCGATGGCGAGCGAGAAGTGGCCATCGGCCTGCCGGAGCAGCAGTTCGCCCGCTTCGCTGTGGGCCAACCGGt                                                                                     >  4:217367/1‑149 (MQ=255)
                                                                 gggTGATCGCCAAGCGCCAGGTTGAAGTGGGCCAGGTGGTCGCCGCCGGGCAGACCGTGTTCACCCTTGCCGCCGATGGCGAGCGAGAAGTGGCCATCGGCCTGCCGGAGCAGCAGTTCGCCCGCTTCGCTGTGGGCCAAGCGGTGAGc                                                                                 >  2:325106/1‑149 (MQ=255)
                                                                     gATCGCCAAGCGCCAGGTTGAAGTGGGCCAGGTGGTCGCCGCCGGGCAGACCGTGTTCACCCTTGCCGCCGATGGCGAGCGAGAAGTGGCCATCGGCCTGCCGGAGCAGCAGTTCGCCCGCTTCGCTGTGGGCCAACCgg                                                                                      >  4:185988/1‑140 (MQ=255)
                                                                     gATCGCCAAGCGCCAGGTTGAAGTGGGCCAGGTGGTCGCCGCCGGGCAGACCGTGTTCACCCTTGCCGCCGATGGCGAGCGAGAAGTGGCCATCGGCCTGCCGGAGCAGCAGTTCGCCCGCTTCGCTGTGGGCCAACCgg                                                                                      <  3:185988/140‑1 (MQ=255)
                                                                      aTCGCCAAGCGCCAGGTTGAAGTGGGCCAGGTGGTCGCCGCCGGGCAGACCGTGTTCACCCTTGCCGCCGATGGCGAGCGAGAAGTGGCCATCGGCCTGCCGGAGCAGCAGTTCGCCCGCTTCGCTGTGGGCCAACCGGTGAGCGTg                                                                              >  8:128386/1‑147 (MQ=255)
                                                                         gCCAAGCGCCAGGTTGAAGTGGGCCAGGTGGTCGCCGCCGGGCAGACCGTGTTCACCCTTGCCGCCGATGGCGAGCGAGAAGTGGCCATCGGCCTGCCGGAGCAGCAGTTCGCCCGCTTCGCTGTGGGCCAACCGGTGAGCGTGGAGCt                                                                         <  7:42159/149‑1 (MQ=255)
                                                                           cAAGCGCCAGGTTGAAGTGGGCCAGGTGGTCGCCGCCGGGCAGACCGTGTTCACCCTTGCCGCCGATGGCGAGCGAGAAGTGGCCATCGGCCTGCCGGAGCAGCAGTTCGCCCGCTTCGCTGTGGGCCAACCGGTGAGCGTGGAGCtgt                                                                       <  3:89509/149‑1 (MQ=255)
                                                                                  cAGGTTGAAGTGGGCCAGGTGGTCGCCGCCGGGCAGACCGTGTTCACCCTTGCCGCCGATGGCGAGCGAGAAGTGGCCATCGGCCTGCCGGAGCAGCAGTTCGCCCGCTTCGCTGTGGGCCAACCGGTGAGCGTGGAGCtgtg                                                                      <  5:105020/143‑1 (MQ=255)
                                                                                  cAGGTTGAAGTGGGCCAGGTGGTCGCCGCCGGGCAGACCGTGTTCACCCTTGCCGCCGATGGCGAGCGAGAAGTGGCCATCGGCCTGCCGGAGCAGCAGTTCGCCCGCTTCGCTGTGGGCCAACCGGTGAGCGTGGAGCtgtg                                                                      >  6:105020/1‑143 (MQ=255)
                                                                                        gAAGTGGGCCAGGTGGTCGCCGCCGGGCAGACCGTGTTCACCCTTGCCGCCGATGGCGAGCGAGAAGTGGCCATCGGCCTGCCGGAGCAGCAGTTCGCCCGCTTCGCTGTGGGCCAACCGGTGAGCGTGGAGCTGTGGTCGCACCCGc                                                           <  5:279378/148‑1 (MQ=255)
                                                                                             gggCCAGGTGGTCGCCGCCGGGCAGACCGTGTTCACCCTTGCCGCCGATGGCGAGCGAGAAGTGGCCATCGGCCTGCCGGAGCAGCAGTTCGCCCGCTTCGCTGTGGGCCAACCGGTGAGCGTGGAGCTGTGGTCGCACCCGCAGgcgc                                                     <  3:338782/149‑1 (MQ=255)
                                                                                                 cAGGTGGTCGCCGCCGGGCAGACCGTGTTCACCCTTGCCGCCGATGGCcacttctcgctcgccatcggcg                                                                                                                                >  2:37742‑M1/1‑48 (MQ=255)
                                                                                                 cAGGTGGTCGCCGCCGGGCAGACCGTGTTCACCCTTGCCGCCGATGGCcacttctcgctcgccatcggcg                                                                                                                                <  1:37742‑M1/70‑23 (MQ=255)
                                                                                                 cAGGTGGTCGCCGCCGGGCAGACCGTGTTCACCCTTGCCGCCGATGGCGAGCGAGAAGTGGCCATCGGCCTGCCGGAGCAGCAGTTCGCCCGCTTCGCTGTGGGCCAACCGGTGAGCGTGGAGCTGTGGTCGCACCCGCAGGCGCGttt                                                 >  2:7222/1‑149 (MQ=255)
                                                                                                  aGGTGGTCGCCGCCGGGCAGACCGTGTTCACCCTTGCCGCCGATGGCGAGCGAGAAGTGGCCATCGGCCTGCCGGAGCAGCAGTTCGCCCGCTTCGCTGTGGGCCAACCGGTGAGCGTGGAGCTGTGGTCGCACCCGCAGGCGCGTTTc                                                <  2:256619/149‑1 (MQ=255)
                                                                                                       gtCGCCGCCGGGCAGACCGTGTTCACCCTTGCCGCCGATGGCGAGCGAGAAGTGGCCATCGGCCTGCCGGAGCAGCAGTTCGCCCGCTTCGCTGTGGGCCAACCGGTGAGCGTGGAGCTGTGGTCGCACCCGCAGGCGCGTTTCCAgg                                            <  1:7222/148‑1 (MQ=255)
                                                                                                        tCGCCGCCGGGCAGACCGTGTTCACCCTTGCCGCCGATGGCGAGCGAGAAGTGGCCATCGGCCTGCCGGAGCAGCAGTTCGCCCGCTTCGCTGTGGGCCAACCGGTGAGCGTGGAGCTGTGGTCGCACCCGCAGGCGCGTTTCCAgggg                                          >  7:366699/1‑149 (MQ=255)
                                                                                                                 ggCAGACCGTGTTCACCCTTGCCGCCGATGGCGAGCGAGAAGTGGCCATCGGCCTGCCGGAGCAGCAGTTCGCCCGCTTCGCTGTGGGCCAACCGGTGAGCGTGGAGCTGTGGTCGCACCCGCAGGCGCGTTTCCAGGGGCGCATTcgc                                 <  7:49860/149‑1 (MQ=255)
                                                                                                                   cAGACCGTGTTCACCCTTGCCGCCGATGGCGAGCGAGAAGTGGCCATCGGCCTGCCGGAGCAGCAGTTCGCCCGCTTCGCTGTGGGCCAACCGGTGAGCGTGGAGCTGTGGTCGCACCCGCAGGCGCGTTTCCAGGGGCGCATTCGCGa                               <  3:217367/149‑1 (MQ=255)
                                                                                                                   cAGACCGTGTTCACCCTTGCCGCCGATGGCGAGCGAGAAGTGGCCATCGGCCTGCCGGAGCAGCAGTTCGCCCGCTTCGCTGTGGGCCAACCGGTGAGCGTGGAGCTGTGGTCGCACCCGCAGGCGCGTTTCCAGGGGCGCATTCGCGa                               <  3:374032/149‑1 (MQ=255)
                                                                                                                    aGACCGTGTTCACCCTTGCCGCCGATGGCGAGCGAGAAGTGGCCATCGGCCTGCCGGAGCAGCAGTTCGCCCGCTTCGCTGTGGGCCAACCGGTGAGCGTGGAGCTGTGGTCGCACCCGCAGGCGCGTTTCCAGGGGCGCATTCGCGAg                              <  6:263324/149‑1 (MQ=255)
                                                                                                                     gACCGTGTTCACCCTTGCCGCCGATGGCgagcgagaagtggccatcggcggcaagggtgaacacggtctgcccggcggcgaccacctggcccacttcaacctggcgcttggcgatcaccccggcctgcggcgcacgcaatacggcatat                             >  6:376737‑M1/1‑28 (MQ=255)
                                                                                                                           gtTCACCCTTGCCGCCGATGGCGAGCGAGAAGTGGCCATCGGCCTGCCGGAGCAGCAGTTCGCCCGCTTCGCTGTGGGCCAACCGGTGAGCGTGGAGCTGTGGTCGCACCCGCAGGCGCGTTTCCAGGGGCGCATTCGCGAGCTGTCAc                       >  5:243141/1‑149 (MQ=255)
                                                                                                                             tCACCCTTGCCGCCGATGGCGAGCGAGAAGTGGCCATCGGCCTGCCGGAGCAGCAGTTCGCCCGCTTCGCTGTGGGCCAACCGGTGAGCGTGGAGCTGTGGTCg                                                                  >  7:18123/1‑104 (MQ=255)
                                                                                                                             tCACCCTTGCCGCCGATGGCGAGCGAGAAGTGGCCATCGGCCTGCCGGAGCAGCAGTTCGCCCGCTTCGCTGTGGGCCAACCGGTGAGCGTGGAGCTGTGGTCg                                                                  <  8:18123/104‑1 (MQ=255)
                                                                                                                             tCACCCTTGCCGCCGATGGCGAGCGAGAAGTGGCCATCGGCCTGCCGGAGCAGCAGTTCGCCCGCTTCGCTGTGGGCCAACCGGTGAGCGTGGAGCTGTGGTCGCACCCGCAGGCGCGTTTCCAGGGGCGCATTCGCGAGCTGTCACCg                     >  5:320323/1‑149 (MQ=255)
                                                                                                                               aCCCTTGCCGCCGATGGCGAGCGAGAAGTGGCCATCGGCCTGCCGGAGCAGCAGTTCGCCCGCTTCg                                                                                                     >  5:161429/1‑67 (MQ=255)
                                                                                                                               aCCCTTGCCGCCGATGGCGAGCGAGAAGTGGCCATCGGCCTGCCGGAGCAGCAGTTCGCCCGCTTCg                                                                                                     <  6:161429/67‑1 (MQ=255)
                                                                                                                                cccTTGCCGCCGATGGCGAGCGAGAAGTGGCCATCGGCCTGCCGGAGCAGCAGTTCGCCCGCTTCGCTGTGGGCCAACCGGTGAGCGTGGAGCTGTGGTCGCACCCGCAGGCGCGTTTCCAGGGGCGCATTCGCGAGCTGTCAcc                      >  8:118271/1‑145 (MQ=255)
                                                                                                                                cccTTGCCGCCGATGGCGAGCGAGAAGTGGCCATCGGCCTGCCGGAGCAGCAGTTCGCCCGCTTCGCTGTGGGCCAACCGGTGAGCGTGGAGCTGTGGTCGCACCCGCAGGCGCGTTTCCAGGGGCGCATTCGCGAGCTGTCAcc                      <  7:118271/145‑1 (MQ=255)
                                                                                                                                 ccTTGCCGCCGATGGCGAGCGAGAAGTGGCCATCGGCCTGCCGGAGCAGCAGTTCGCCCGCTTCGCTGTGGGCCAACCGGTGAGCGTGGAGCTGTGGTCGCACCCGCAGGCGCGTTTcc                                               <  5:259997/119‑1 (MQ=255)
                                                                                                                                 ccTTGCCGCCGATGGCGAGCGAGAAGTGGCCATCGGCCTGCCGGAGCAGCAGTTCGCCCGCTTCGCTGTGGGCCAACCGGTGAGCGTGGAGCTGTGGTCGCACCCGCAGGCGCGTTTcc                                               >  6:259997/1‑119 (MQ=255)
                                                                                                                                 ccTTGCCGCCGATGGCGAGCGAGAAGTGGCCATCGGCCTGCCGGAGCAGCAGTTCGCCCGCTTCGCTGTGGGCCAACCGGTGAGCGTGGAGCTGTGGTCGCACCCGCAGGCGCGTTTCCAGGGGCGCATTCGCGAGCTGTCACCGgccg                 >  3:154635/1‑149 (MQ=255)
                                                                                                                                 ccTTGCCGCCGATGGCGAGCGAGAAGTGGCCATCGGCCTGCCGGAGCAGCAGTTCGCCCGCTTCGCTGTGGGCCAACCGGTGAGCGTGGAGCTGTGGTCGCACCCGCAGGCGCGTTTCCAGGGGCGCATTCGCGAGCTGTCACCGgccg                 >  4:285937/1‑149 (MQ=255)
                                                                                                                                  cTTGCCGCCGATGGCGAGCGAGAAGTGGCCATCGGCCTGCCGGAGCAGCAGTTCGCCCGCTTCGCTGTGGGCCAACCGGTGAGCGTGGAGCTGTGGTCGCACCCGCAGGCGCGTTTCCAGGGGCGCATTCGCGAGCTGTCACCGgccgc                <  5:12974/149‑1 (MQ=255)
                                                                                                                                     gccgccGATGGCGAGCGAGAAGTGgccatcggcggcaagggtgaacacggtctgcccggcggcgaccacctggcccacttcaacctggcgcttggcgatcaccccggcctgcggcgcacgcaatacggcatattcggcctggttgccc              >  5:376737‑M2/1‑24 (MQ=255)
                                                                                                                                      ccgccgATGGCGAGCGAGAAGTGGCCATCGGCCTGCCGGAGCAGCAGTTCGCCCGCTTCGCTGTGGGCCAACCGGTGAGCGTGGAGCTGTGGTCGCACCCGCAGGCGCGTTTCCAGGGGCGCATTCGCGAGCTGTCACCGGCCGCCGAc            <  3:398168/149‑1 (MQ=255)
                                                                                                                                       cgccgATGGCGAGCGAGAAGTGgccatcggcggcaagggtgaacacggtctgcccggcggcgaccacctg                                                                                          <  1:37742‑M2/70‑49 (MQ=255)
                                                                                                                                       cgccgATGGCGAGCGAGAAGTGgccatcggcggcaagggtgaacacggtctgcccggcggcgaccacctg                                                                                          >  2:37742‑M2/1‑22 (MQ=255)
                                                                                                                                        gccgATGGCcacttctcgctcgccatcggcggcaagggtgaacacggtctgcccggcggcgaccacctggcgcacttcaacctggcgcttggcgatcaccccggcctgcggcgcacgcaatacggcatattcggcctggttgcccgcca          <  1:227937‑M1/149‑141 (MQ=255)
                                                                                                                                        gccgATGGCGAGCGAGAAGTGGCCATCGGCCTGCCGGAGCAGCAGTTCGCCCGCTTCGCTGTGGGCCAACCGGTGAGCGTGGAGCTGTGGTCGCACCCGCAGGCGCGTTTCCAGGGGCGCATTCGCGAGCTGTCACCGGCCGCCGAccc          >  7:288311/1‑149 (MQ=255)
                                                                                                                                         ccgATGGCGAGCGAGAAGTGgccatcggcggcaagggtgaacacggtctgcccggcggcgaccacctggccgacttcaacctggcgcttggcgatcaccccggcctgcggcgcacgcaatacggcatattcggcctggttgcccgcca          <  5:399166‑M2/148‑129 (MQ=255)
                                                                                                                                         ccgATGGCGAGCGAGAAGTGGCCATCGGCCTGCCGGAGCAGCAGTTCGCCCGCTTCGCTGTGGGCCAACCGGTGAGCGTGGAGCTGTGGTCGCACCCGCAGGCGCGTTTCCAGGGGCGCATTCGCGAGCTGTCACCGGCCGCCGACCcg         >  8:43059/1‑149 (MQ=255)
                                                                                                                                           gATGGCcacttctcgctcgccatcggcggcaagggtgaacacggtctgcccggcggcgaccacctggcccacttcaacctggcgcttggcgatcaccccggcctgcggcgcacgcaatacggcatattcggcctggttgcccgccacat       >  1:231341‑M1/1‑6 (MQ=255)
                                                                                                                                                ccacttctcgctcgccatcggcggcaagggtgaacacggtctgcccggcggcgaccacctggcccacttcaacctggcgcttggcgatcaccccggcctgcggcgcacgcaatacggcatattcggcctggttgcccgccacatcgaac  >  8:370557‑M1/1‑1 (MQ=255)
                                                                                                                                                |                                                                                                                                                    
CAAGGCCGAGTTCGATGTGGCGGGCAACCAGGCCGAATATGCCGTATTGCGTGCGCCGCAGGCCGGGGTGATCGCCAAGCGCCAGGTTGAAGTGGGCCAGGTGGTCGCCGCCGGGCAGACCGTGTTCACCCTTGCCGCCGATGGCGAGCGAGAAGTGGCCATCGGCCTGCCGGAGCAGCAGTTCGCCCGCTTCGCTGTGGGCCAACCGGTGAGCGTGGAGCTGTGGTCGCACCCGCAGGCGCGTTTCCAGGGGCGCATTCGCGAGCTGTCACCGGCCGCCGACCCGCGCTCGC  >  NC_002947/1720719‑1721011

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.