New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4956389	52 (0.810)	4 (0.070)	4/244	NT	7.5%	coding (366/1374 nt)	fliI	flagellum‑specific ATP synthase
	?	NC_002947	= 4956435	49 (0.800)					coding (320/1374 nt)	fliI	flagellum‑specific ATP synthase

CGACGGTAAGCAGGCCGTTGATACTGCGAATGCCCACATCCAACGGCTTGCTGATAGGGTCGCGGTTGAGCGGGTTGATCACCGGGCCGTCCATCGGCACCCAGTCCTCGGCCTTCATCCCGCCCTTGCCATCCAGCGCACGGCCGGCGCCGTCGAGCACCCGGCCCAGCATGCTCATGCCCATGGGCAGACGGCCGCCGTCATCCAGCGGCACGACCCGGGCCCCCGGCGCGATGCCGACGATACTGCCCACCGGCATCAGAAACACCTTGGGCCCGGCAAAGCCCATGACTTCGG  >  NC_002947/4956241‑4956537                                                                                                                                                     |                                                                                                                                                     cGACGGTAAGCAGGCCGTTGATACTGCGAATGCCCACATCCAACGGCTTGCTGATAGGGTCGCGGTTGAGCGGGTTGATCACCGGGCCGTCCATCGGCACCCAGTCCTCGGCCTTCATCCCGCCCTTGCCATCCAGCGCACGGCCGGCG                                                                                                                                                      >  5:234753‑M1/1‑149 (MQ=255)    cGGTAAGCAGGCCGTTGATACTGCGAATGCCCACATCCAACGGCTTGCTGATAGGGTCGCGGTTGAGCGGGTTGATCACCGGGCCGTCCATCGGCACCCAGTCCTCGGCCTTCATCCCGCCCTTGCCATCCAGCGCACGGCCGGCGCCg                                                                                                                                                   <  5:182280/149‑1 (MQ=255)     ggTAAGCAGGCCGTTGATACTGCGAATGCCCACATCCAACGGCTTGCTGATAGGGTCGCGGTTGAGCGGGTTGATCACCGGGCCGTCCATCGGCACCCAGTCCTCGGCCTTCATCCCGCCCTTGCCATCCAGCGCACGGCCGGCGCCGt                                                                                                                                                  <  7:202050/149‑1 (MQ=255)       tAAGCAGGCCGTTGATACTGCGAATGCCCACATCCAACGGCTTGCTGATAGGGTCGCGGTTGAGCGGGGTGATCACCGGGCCGTCCATCGGCACCCAGTCCTCGGCCTTCATCCCGCCCTTGCCATCCAGCGCACGGCCGGCGCCGTCg                                                                                                                                                <  8:170355/149‑1 (MQ=255)                 gTTGATACTGCGAATGCCCACATCCAACGGCTTGCTGATAGGGTCGCGGTTGAGCGGGTTGATCACCGGGCCGTCCATCGGCACCCAGTCCTCGGCCTTCATCCCGCCCTTGCCATCCAGCGCACGGCCGGCGCCGTCGAGCACCCGGc                                                                                                                                      >  4:33472/1‑149 (MQ=255)                 gTTGATACTGCGAATGCCCACATCCAACGGCTTGCTGATAGGGTCGCGGTTGAGCGGGTTGATCACCGGGCCGTCCATCGGCACCCAGTCCTCGGCCTTCATCCCGCCCTTGCCATCCAGCGCACGGCCGGCGCCGTCGAGCACCCGGc                                                                                                                                      >  8:225396/1‑149 (MQ=255)                              aTGCCCACATCCAACGGCTTGCTGATAGGGTCGCGGTTGAGCGGGTTGATCACCGGGCCGTCCATCGGCACCCAGTCCTCGGCCTTCATCCCGCCCTTGCCATCCAGCGCACGGCCGGCGCCGTCGAGCACCCGGCCCAGCATGCTCAt                                                                                                                         >  3:11243/1‑149 (MQ=255)                                  ccACATCCAACGGCTTGCTGATAGGGTCGCGGTTGAGCGGGTTGATCACCGGGCCGTCCATCGGCACCCAGTCCTCGGCCTTCATCCCGCCCTTGCCATCCAGCGCACGGCCGGCGCCGTCGAGCCCCCGGCCCAGCATGCTCATGcc                                                                                                                      >  4:26886/1‑148 (MQ=255)                                  ccACATCCAACGGCTTGCTGATAGGGTCGCGGTTGAGCGGGTTGATCACCGGGCCGTCCATCGGCACCCAGTCCTCGGCCTTCATCCCGCCCTTGCCATCCAGCGCACGGCCGGCGCCGTCGAGCAcc                                                                                                                                          >  8:248926/1‑128 (MQ=255)                                  ccACATCCAACGGCTTGCTGATAGGGTCGCGGTTGAGCGGGTTGATCACCGGGCCGTCCATCGGCACCCAGTCCTCGGCCTTCATCCCGCCCTTGCCATCCAGCGCACGGCCGGCGCCGTCGAGCAcc                                                                                                                                          <  7:248926/128‑1 (MQ=255)                                  ccACATCCAACGGCTTGCTGATAGGGTCGCGGTTGAGCGGGTTGATCACCGGGCCGTCCATCGGCACCCAGTCCTCGGCCTTCATCCCGCCCTTGCCATCCAGCGCACGGCCGGCGCCGTCGAGCACCCGGCCCAGCATGCTCATGcc                                                                                                                      >  5:326271/1‑148 (MQ=255)                                   cacaTCCAACGGCTTGCTGATAGGGTCGCGGTTGAGCGGGTTGATCACCGGGCCGTCCATCGGCACCCAGTCCTCGGCCTTCATCCCGCCCTTGCCATCCAGCGCACGGCCGGCGCCGTCGAGCACCCGGCCCAGCATGCTCATGCCCa                                                                                                                    <  3:193852/149‑1 (MQ=255)                                    acaTCCAACGGCTTGCTGATAGGGTCGCGGTTGAGCGGGTTGATCACCGGGCCGTCCATCGGCACCCAGTCCTCGGCCTTCATCCCTCCCTTGCCATCCAGCGCACGGCCGGCGCCGTCGAGCACCCGGCCCAGCATGCTCATGCCCAt                                                                                                                   <  5:243571/149‑1 (MQ=255)                                    acaTCCAACGGCTTGCTGATAGGGTCGCGGTTGAGCGGGTTGATCACCGGGCCGTCCATCGGCACCCAGTCCTCGGCCTTCATCCCGCCCTTGCCATCCAGCGCACGGCCGGCGCCGTCGAGCACCCGGCCCAGCATGCTCATGCCCAt                                                                                                                   <  7:225396/149‑1 (MQ=255)                                      atgcAACGGCTTGCTGATAGGGTCGCGGTTGAGCGGGTTGATCACCGGGCCGTCCATCGGCACCCAGTCCTCGGCCTTCATCCCGCCCTTGCCATCCAGCGCACGGCCGGCGCCGTCGAGCACCCGGCCCAGCATGCTCATGCCCATgg                                                                                                                 <  6:93533/146‑1 (MQ=255)                                        ccAACGGCTTGCTGATAGGGTCGCGGTTGAGCGGGTTGATCACCGGGCCGTCCATCGGCACCCAGTCCTCGGCCTTCATCCCGCCCTTGCCATCCAGCGCACGGCCGGCGCCGTCGAGCACCCGGCCCAGCATGCTCATGCCCATggg                                                                                                                >  5:251246/1‑148 (MQ=255)                                        ccAACGGCTTGCTGATAGGGTCGCGGTTGAGCGGGTTGATCACCGGGCCGTCCATCGGCACCCAGTCCTCGGCCTTCATCCCGCCCTTGCCATCCAGCGCACGGCCGGCGCCGTCGAGCACCCGGCCCAGCATGCTCATGCCCATggg                                                                                                                >  6:168583/1‑148 (MQ=255)                                         cAACGGCTTGCTGATAGGGTCGCGGTTGAGCGGGTTGATCACCGGGCCGTCCATCGGCACCCAGTCCTCGGCCTTCATCCCTCCCTTGCCATCCAGCGCACGGCCGGCGCCGTCGAGCACCCGGCCCAGCATGCTCATGCCCATGGGCa                                                                                                              <  4:11243/149‑1 (MQ=255)                                         cAACGGCTTGCTGATAGGGTCGCGGTTGAGCGGGTTGATCACCGGGCCGTCCATCGGCACCCAGTCCTCGGCCTTCATCCCGCCCTTGCCATCCAGCGCACGGCCGGCGCCGTCGAGCACCCGGCCCAGCATGCTCATGCCCATGGGct                                                                                                              >  2:213443/1‑148 (MQ=255)                                                ttGCTGATAGGGTCGCGGTTGAGCGGGTTGATCACCGGGCTGTCCATCGGCACCCAGTCCTCGGCCTTCATCCCGCCCTTGCCATCCAGCGCACGGCCGGCGCCGTCGAGCACCCGGCCCAGCATGCTCATGCCCATGGGCAGACGGCc                                                                                                       <  1:51844‑M2/149‑2 (MQ=255)                                                    tGATAGGGTCGCGGTTGAGCGGGTTGATCACCGGGCCGTCCATCGGCACCCAGTCCTCGGCCTTCATCCCGCCCTTGCCATCCAGCGCACGGCCGGCGCCGTCGAGCACCCGGCCCAGCATGCTCATGCCCATGGGCAGACGGCcgccg                                                                                                   <  3:340681‑M2/149‑6 (MQ=255)                                                      aTAGGGTCGCGGTTGAGCGGGTTGATCACCGGGCCGTCCATCGGCACCCAGTCCTCGGCCTTCATCCCGCCCTTGCCATCCAGCGCACGGCCGGCGCCGTCGAGCACCCGGCCCAGCATGCTCATGCCCATGGGCAGACGGCCGCCGt                                                                                                  >  7:9494/1‑148 (MQ=255)                                                      aTAGGGTCGCGGTTGAGCGGGTTGATCACCGGGCCGTCCATCGGCACCCAGTCCTCGGCCTTCATCCCGCCCTTGCCATCCAGCGCACGGCCGGCGCCGTCGAGCACCCGGCCCAGCATGCTCATGCCCATGGGCAGACGGCCGCCGt                                                                                                  >  8:137487/1‑148 (MQ=255)                                                              gcgGTTGAGCGGGTTGATCACCGGGCCGTCCATCGGCACCCAGTCCTCGGCCTTCATCCCGCCCTTGCCATCCAGCGCACGGCCGGCGCCGTCGAGCACCCGGCCCAGCATGCTCATGCCCATGGGCAGACGGCCGCCGTCATCCAGCg                                                                                         <  6:104023/149‑1 (MQ=255)                                                                 gTTGAGCGGGTTGATCACCGGGCCATCCATCGGCACCCAGTCCTCGGCCTTCATCCCGCCCTTGCCATCCAGCGCACGGCCGGCGCCGTCGAGCACCCGGCCCAGCATGCTCATGCCCATGGGCAGACGGCCGCCGTCATCCAGCGGCa                                                                                      <  6:235210/149‑1 (MQ=255)                                                                         ggTTGTTCTCCGGGCCGTCCATCGGCAACCTGTCCTCGGCCTTCATCCCGCCCTTGCCATCCAGCGCACGGCCGGCGCCGTCGAGCACCCGGCCCAGCATGCTCATGCCCATGGGCAGACGGCCGCCGTCATCCAGCGGCACGACCCgg                                                                              <  8:256740/149‑1 (MQ=255)                                                                         ggTTGATCACCGGGCCGTCCATCGGCACCCAGTCCTCGGCCTTCATCCCGCCCTTGCCATCCAGCGCACGGCCGGCGCCGTCGAGCACCCGGCCCAGCATGCTCATg                                                                                                                        <  5:91041/107‑1 (MQ=255)                                                                         ggTTGATCACCGGGCCGTCCATCGGCACCCAGTCCTCGGCCTTCATCCCGCCCTTGCCATCCAGCGCACGGCCGGCGCCGTCGAGCACCCGGCCCAGCATGCTCATg                                                                                                                        >  6:91041/1‑107 (MQ=255)                                                                         ggTTGATCACCGGGCCGTCCATCGGCACCCACTCCTCGGCCTTCATCCCGCCCTTGCCATCCAGCGCACGGCCGGCGCCGTCGAGCACCCGGCCCAGCATGCTCATGCCCATGGGCAGACGGCCGCCGTCATCCAGCGGCACGACCCgg                                                                              >  1:251693/1‑149 (MQ=255)                                                                               tCACCGGGCCGTCCATCGGCACCCAGTCCTCGGCCTTCATCCCGCCCTTGCCATCCAGCGCACGGCCGGCGCCGTCGAGCACCCGGCCCAGCATGCTCATGCCCATGGGCAGACGGCCGCCGTCATCCAGCGGCACGACCCGGGccccc                                                                        >  2:292386/1‑149 (MQ=255)                                                                               tCACCGGGCCGTCCATCGGCACCCAGTCCTCGGCCTTCATCCAGCCCTTGCCATCCAGCGCACGGCCGGCGACGTCGAGCACCCGGCCCAGCAAGCTCATGCCCATGGGCAGACGGCCGCCGTCATCCAGCGGCACGACCCGGGccccc                                                                        >  2:213305/1‑149 (MQ=255)                                                                                 aCCGGGCCGTCCATCGGCACCCAGTCCTCGGCCTTCATCCCGCCCTTGCCATCCAGCGCACGGCCGGCGCCGTCGAGCACCCGGCCCAGCATGCTCATGCCCATGGGCAGACGGCCGCCGTCATCCAGCGGCACGACCCGGGCCCCCg                                                                       <  6:251246/148‑1 (MQ=255)                                                                                   cGGGCCGTCCATCGGCACCCAGTCCTCGGCCTTCATCCCGCCCTTGCCATCCAGCGCACGGCCGGCGCCGTCGAGCACCCGGCCCAGCATGCTCATGCCCATGGGCAGACGGCCGCCGTCATCCAGCGGCACGACCCGGGCCCCCGgcg                                                                    >  1:87825/1‑149 (MQ=255)                                                                                    gggCCGTCCATCGGCACCCAGTCCTCGGCCTTCATCCCGCCCTTGCCATCCAGCGCACGGCCGGCGCCGTCGAGCACCCGGCCCAGCATGCTCATGCCCATGGGCAGACGGCCGCCGTCATCCAGCGGCACGACCCGGGCCCCCGgcgc                                                                   <  8:9494/149‑1 (MQ=255)                                                                                    gggCCGTCCATCGGCACCCAGTCCTCGGCCTTCATCCCGCCCTTGCCATCCAGCGCACGGCCGGCGCCGTCGAGCACCCGGCCCAGCATGCTCATGCCCATGGGCAGACGGCCGCCGTCATCCAGCGGCACGACCCGGGCCCCCGgcgc                                                                   <  3:26886/149‑1 (MQ=255)                                                                                        cGTCCATCGGCACCCAGTCCTCGGCCTTCATCCCGCCCTTGCCATCCAGCGCACGGCCGGCGgccgtctgcccatgggcatgagcatgctgggccgggtgctcgacggcgccggccgtgc                                                                                            >  3:149420‑M1/1‑62 (MQ=255)                                                                                        cGTCCATCGGCACCCAGTCCTCGGCCTTCATCCCGCCCTTGCCATCCAGCGCACGGCCGGCGgccgtctgcccatgggcatgagcatgctgggccgggtgctcgacggcgccggccgtgc                                                                                            <  4:149420‑M1/120‑59 (MQ=255)                                                                                           ccATCGGCACCCAGTCCTCGGCCTTCATCCCGCCCTTGCCATCCAGCGCACGGCCGGCGCCGTCGAGCACCCGGCCCAGCATGCTCATGCCCATGGGCAGACGGCCGCCGTCATCCAGCGGCACGACCCGGGCCCCCGGCGCGATGcc                                                             >  6:62441/1‑148 (MQ=255)                                                                                           ccATCGGCACCCAGTCCTCGGCCTTCATCCCGCCCTTGCCATCCAGCGCACGGCCGGCGCCGTCGAGCACCCGGCCCAGCATGCTCATGCCCATGGGCAGACGGCCGCCGTCATCCAGCGGCACGACCCGGGCCCCCGGCGCGATGCcg                                                            <  7:137487/149‑1 (MQ=255)                                                                                             aTCGGCACCCAGTCCTCGGCCTTCATCCCGCCCTTGCCATCCAGCGCACGGCCGGCGCCGTCGAGCACCCGGCCCAGCATGCTCATGCCCATGGGCAGACGGCCGCCGTCATCCAGCGGCACGACCCGGGCCCCCGGCGCGATGCcgac                                                          >  2:216626/1‑149 (MQ=255)                                                                                             aTCGGCACCCAGTCCTCGGCCTTCATCCCGCCCTTGCCATCCAGCGCACGGCCGGCGCCGTCGAGCACCCGGCCCAGCATGCTCATGCCCATGGGCAGACGGCCGCCGTCATCCAGCGGCACGACCCGGGCCCCCGGCGCGATGCcgac                                                          >  2:22522/1‑149 (MQ=255)                                                                                                     ccAGTCCTCGGCCTTCATCCCGCCCTTGCCATCCAGCGCACGGCCGGCGCCGTCGAGCACCCGGCCCAGCATGCTCATGCCCATGGGCAGACGGCCGCCGTCATCCAGCGGCACGACCCGGGCCCCCGGCGCGATGCCGACGATACTGc                                                  >  8:319421/1‑149 (MQ=255)                                                                                                         tCCTCGGCCTTCATCCCGCCCTTGCCATCCAGCGCACGGCCGGCGCCGTCGAGCACCCGGCCCAGCATGCTCATGCCCATGGGCAGACGGCCGCCGTCATCCAGCGGCACGACCCGGGCCCCCGGCGCGATGCCGACGATACTGccccc                                              >  2:338287/1‑147 (MQ=255)                                                                                                           cTCGGCCTTCATCCCGCCCTTGCCATCCAGCGCACGGCCGGCGCCGTCGAGCACCCGGCCCAGCATGCTCATGCCCATGGGCAGACGGCCGCCGTCATCCAGCGGCACGACCCGGGCCCCCGGCGCTATGCCGACGATACTGCCCAcc                                             <  6:326271/148‑1 (MQ=255)                                                                                                           cTCGGCCTTCATCCCGCCCTTGCCATCCAGCGCACGGCCGGCGCCGTCGAGCACCCGGCCCAGCATGCTCATGCCCATGGGCAGACGGCCGCCGTCATCCAGCGGCACGACCCGGGCCCCCGGCGCGATGCCGACGATACTGCCCACCg                                            >  3:250339/1‑149 (MQ=255)                                                                                                            tCGGCCTTCATCCCGCCCTTGCCATCCAGCGCACGGCCGGCGgccgtctgcccatgggcatgagcatgctgggccgggtgctcgacggcgccggccg                                                                                               >  5:143224‑M1/1‑42 (MQ=255)                                                                                                            tCGGCCTTCATCCCGCCCTTGCCATCCAGCGCACGGCCGGCGgccgtctgcccatgggcatgagcatgctgggccgggtgctcgacggcgccggccg                                                                                               <  6:143224‑M1/97‑56 (MQ=255)                                                                                                                ccTTCATCCCGCCCTTGCCATCCAGCGCACGGCCGGCGCCGTCGAGCACCCGGCCCAGCATGCTCATGCCCATGGGCAGACGGCCGCCGTCATCCAGCGGCACGACCCGGGCCCCCGGCGCGATGCCGACGATACTGCCCACCGGCATc                                       <  4:340681/149‑1 (MQ=255)                                                                                                                    cATCCCGCCCTTGCCATCCAGCGCACGGCCGGGGCCGTCGAGCACCCGGCCCAGCATGCTCATGCCCATGGGCAGACGGCCGCCGTCATCCAGCGGCACGACCCGGGCCCCCGGCGCGATGCCGACGATACTGCCCACCg                                            <  5:355476/140‑1 (MQ=255)                                                                                                                    cATCCCGCCCTTGCCATCCAGCGCACGGCCGGCGCCGTCGAGCACCCGGCCCAGCATGCTCATGCCCATGGGCAGACGGCCGCCGTCATCCAGCGGCACGACCCGGGCCCCCGGCGCGATGCCGACGATACTGCCCACCg                                            >  6:355476/1‑140 (MQ=255)                                                                                                                    cATCCCGCCCTTGCCATCCAGCGCACGGCCGGCGCCGTCGAGCACCCGGCCCAGCATGCTCATGCCCATGGGCAGACGGCCGCCGTCATCCAGCGGCACGACCCGGGCCCCCGGCGCGATGCCGACGATACTGCCCACCGGCATCAGa                                    <  1:216626/148‑1 (MQ=255)                                                                                                                     aTCCCGCCCTTGCCATCCAGCGCACGGCCGGCGCCGTCGAGCACCCGGCCCAGCATGCTCATGCCCATGGGCAGACGGCCGCCGTCATCCAGCGGCACGACCCGGGCCCCCGGCGCGATGCCGACGATACTGCCCACCGGCATCAGaaa                                  <  5:62441/149‑1 (MQ=255)                                                                                                                     aTCCCGCCCTTGCCATCCAGCGCACGGCCGGCGCCGTCGAGCACCCGGCCCAGCATGCTCATGCCCATGGGCAGACGGCCGCCGTCATCCAGCGGCACGACCCGGGCCCCCGGCGCGATGCCGACGATACTGCCCACCGGCATCAGaa                                   <  8:353749/148‑1 (MQ=255)                                                                                                                      tCCCGCCCTTGCCATCCAGCGCACGGCCGGCGCCGTCGAGCACCCGGCCCAGCATGCTCATGCCCATGGGCAGACGGCCGCCGTCATCCAGCGGCACGACCCGGGCCCCCGGCGCGATGCCGACGATACTGCCCACCGGCATCAGAAac                                 <  7:319421/149‑1 (MQ=255)                                                                                                                        ccGCCCTTGCCATCCAGCGCACGGCCGGCGCCGTCGAGCACCCGGCCCAGCATGCTCATGCCCATGGGCAGACGGCCGCCGTCATCCAGCGGCACGACCCGGGCCCCCGGCGCGATGCCGACGATACTGCCCACCGGCATCAGAAacac                               >  1:173742/1‑149 (MQ=255)                                                                                                                            ccTTGCCATCCAGCGCACGGCCGGCGCCGTCGAGCACCCGGCCCAGCATGCTCATGCCCATGGGCAGACGGCCGCCGTCATCCAGCGGCACGACCCGGGCCCCCGGCGCGATGCCGACGATACTGCCCACCGGCATCAGAAACACCTTg                           >  5:380921/1‑149 (MQ=255)                                                                                                                             cTTGCCATCCAGCGCACGGCCGGCGCCGTCGAGCACCCGGCCCAGCATGCTCATGCCCATGGGCAGACGGCCGCCGTCATCCAGCGGCACGACCCGGGCCCCCGGCGCGATGCCGACGATACTGCCCACCGGCATCAGAAACACCTTgg                          <  2:173742/149‑1 (MQ=255)                                                                                                                                 ccATCCAGCGCACGGCCGGCGCCGTCGAGCACCCGGCCCAGCATGCTCATGCCCATGGGCAGACGGCCGCCGTCATCCAGCGGCACGACCCGGGCCCCCGGCGCGATGCCGACGATACTGCCCACCGGCATCAGAAACACCTTGGGcc                       <  3:33472/148‑1 (MQ=255)                                                                                                                                          gcACGGCCGGCGCCGTCGAGCACCCGGCCCAGCATGCTCATGCCCATGGGCAGACGGCcgccggccgtgcgctggatggcaagggcgggatgaaggccgaggactgggtgccgatggacg                                          >  3:149420‑M2/1‑58 (MQ=255)                                                                                                                                          gcACGGCCGGCGCCGTCGAGCACCCGGCCCAGCATGCTCATGCCCATGGGCAGACGGCcgccggccgtgcgctggatggcaagggcgggatgaaggccgaggactgggtgccgatggacg                                          <  4:149420‑M2/120‑63 (MQ=255)                                                                                                                                             cggccggcGCCGTCGAGCACCCGGCCCAGCATGCTCATGCCCATGGGCAGACGGCcgccggccgtgcgctggatggcaagggcgggatgaaggccga                                                              >  5:143224‑M2/1‑55 (MQ=255)                                                                                                                                             cggccggcGCCGTCGAGCACCCGGCCCAGCATGCTCATGCCCATGGGCAGACGGCcgccggccgtgcgctggatggcaagggcgggatgaaggccga                                                              <  6:143224‑M2/97‑43 (MQ=255)                                                                                                                                             cggccggcGCCGTCGAGCACCCGGCCCAGCATGCTCATGCCCATGGGCAGACGGCCGCCGTCATCCAGCGGCACGACCCGGGCCCCCGGCGCGATGCCGACGATACTGCCCACCGGCATCAGAAACACCTTGGGCCCGGCAAAGCCCAt          <  2:87825/149‑1 (MQ=255)                                                                                                                                             cggccggcGCCGTCGAGCACCCGGCCCAGCATGCTCATGCCCATGGGCAGACGGCCGCCGTCATCCAGCGGCACGACCCGGGCCCCCGGCGCGATGCCGACGATACTGCCCACCGGCATCAGAAACACCTTGGGCCCGGCAAAGCCCAt          <  4:250339/149‑1 (MQ=255)                                                                                                                                               gccggcGCCGTCGAGCACCCGGCCCAGCATGCTCATGCCCATGGGCAGACGGCCGCCGTCATCCAGCGGCACGACCCGGGCCCCCGGCGCGATGCCGACGATACTGCCCACCGGCATCAGAAACACCTTGGGCCCGGCAAAGCCCATg         >  4:150279/1‑148 (MQ=255)                                                                                                                                                 cggcggccgtctgcccatgggcatgagcatgctgggccgggtgctcgacggcgccggccgtgcgctggatggcaagggcgggatgaaggccgaggactgggtgccgatggacggcccggtgatcaacccgctcaaccgcgaccctatca      <  3:340681‑M1/149‑145 (MQ=255)                                                                                                                                                     ggccgtctgcccatgggcatgagcatgctgggccgggtgctcgacggcgccggccgtgcgctggatggcaagggcgggatgaaggccgaggactgggtgccgatggacagcccggtgatcaacccgctcaaccgcgaccctatcagcaa  <  1:51844‑M1/149‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                     CGACGGTAAGCAGGCCGTTGATACTGCGAATGCCCACATCCAACGGCTTGCTGATAGGGTCGCGGTTGAGCGGGTTGATCACCGGGCCGTCCATCGGCACCCAGTCCTCGGCCTTCATCCCGCCCTTGCCATCCAGCGCACGGCCGGCGCCGTCGAGCACCCGGCCCAGCATGCTCATGCCCATGGGCAGACGGCCGCCGTCATCCAGCGGCACGACCCGGGCCCCCGGCGCGATGCCGACGATACTGCCCACCGGCATCAGAAACACCTTGGGCCCGGCAAAGCCCATGACTTCGG  >  NC_002947/4956241‑4956537

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.