New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5819210 =	70 (1.090)	4 (0.070)	4/238	NT	6.1%	coding (479/819 nt)	proI	pyrroline‑5‑carboxylate reductase
	?	NC_002947	5819277 =	57 (0.950)					coding (546/819 nt)	proI	pyrroline‑5‑carboxylate reductase

GCTCGCCCGGTGGTGCGCTGCATGCCCAACACCCC‑GGCATTGCTGCGCCAAGGCGTGAGCGGCCTGTACGCCACCGCTGAAGTGTCCGGCGAACAGCGTCTGCAGGCCGAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTGGCCCGGCGTACTTCTTCCTGCTGATCGAGGCCATGACCGCGGCAGGCGAAAAACTCGGCCTGCCACGCGAAACGGCCTCCCAACTGACCTTGCAGACAGCCC  >  NC_002947/5819062‑5819356                                                                                                                                                      |                                                                                                                                                   gcTCGCCCGGTGGTGCGCTGCATGCCCAACACCCC‑GGCATTGCTGCGCCAAGGCGTGAGCGGCCTGTACGCCACCGCTGAAGTGTCCGGCGAACAGCGTCTGCAGGCCGAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGa                                                                                                                                                    <  7:282508/149‑1 (MQ=255)    aagtgacgcggcggcgcagttcagcggcatcgacatcgcttgcaactgccatgcgcgcggcgcccagggctgtctgcaaggtcagttgggaggccgtttcgcgtggcaggccgagtttttcgcctgccgcggtcatggcctcgatcagc                                                                                                                                                  >  8:54025‑M1/147‑149 (MQ=255)    aagtgacgcggcggcgcagttcagcggcatcgacatcgcttgcaactgccatgcgcgcggcgcccagggctgtctgcaaggtcagttgggaggccgtttcgcgtggcaggccgagtttttcgcctgccgcggtcatggcctcgatcag                                                                                                                                                   <  8:31152‑M1/2‑1 (MQ=255)     gCCCGGTGGTGCGCTGCATGCCCAACACCCC‑GGCATTGCTGCGCCAAGGCGTGAGCGGCCTGTACGCCACCGCTGAAGTGTCCGGCGAACAGCGTCTGCAGGCCGAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAg                                                                                                                                                >  2:97449/1‑149 (MQ=255)     agtgacgcggcggcgcagttcagcggcatcgacatcgcttgcaactgccatgcgcgcggcgcccagggctgtctgcaaggtcagttgggaggccgtttcgcgtggcaggccgagtttttcgcctgccgcggtcatggcctcgatcag                                                                                                                                                   <  2:98669‑M1/2‑1 (MQ=255)       ccGGTGGTGCGCTGCATGCCCAACACCCCGGGCATTGCTGCGCCAAGGCGTGAGCGGCCTGTACGCCACCGCTGAAGTGTCCGGCGAACAGCGTCTGCAGGCCGAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAg                                                                                                                                                >  1:250720/1‑148 (MQ=255)       ccGGTGGTGCGCTGCATGCCCAACACCCC‑GGCATTGCTGCGCCAAGGCGTGAGCGGCCTGTACGCCACCGCTGAAGTGTCCGGCGAACAGCGTCTGCAGGCCGAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAgg                                                                                                                                               >  3:270880/1‑148 (MQ=255)         ggtggtGCGCTGCATGCCCAACACCCC‑GGCATTGCTGCGCCAAGGCGTGAGCGGCCTGTACGCCACCGCTGAAGTGTCCGGCGAACAGCGTCTGCAGGCCGAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAAc                                                                                                                                            >  3:1031/1‑149 (MQ=255)         acgcggcggcgcagttcagcggcatcgacatcgcttgcaactgccatgcgcgcggcgcccagggctgtctgcaaggtcagttgggaggccgtttcgcgtggcaggccgagtttttcgcctgccgcggtcatggcctcgatcAGCAgg                                                                                                                                               <  2:396424‑M1/6‑1 (MQ=255)             gtgCGCTGCATGCCCAACACCCC‑GGCATTGCTGCGCCAAGGCGTGAGCGGCCTGTACGCCACCGCTGAAGTGTCCGGCGAACAGCGTCTGCAGGCCGAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGc                                                                                                                                         >  7:340772/1‑148 (MQ=255)                cgcTGCATGCCCAACACCCC‑GGCATTGCTGCGCCAAGGCGTGAGCGGCCTGTACGCCACCGCTGAAGTGTCCGGCGAACAGCGTCTGCAGGCCGAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGCAACt                                                                                                                                     <  4:161521/149‑1 (MQ=255)                cgcTGCATGCCCAACACCCC‑GGCATTGCTGCGCCAAGGCGTGAGCGGCCTGTACGCCACCGCTGAAGTGTCCGGCGAACAGCGTCTGCAGGCCGAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGCAACt                                                                                                                                     <  8:336270/149‑1 (MQ=255)                  cgcagttcagcggcatcgacatcgcttgcaactgccatgcgcgcggcgcccagggctgtctgcaaggtcagttgggaggccgtttcgcgtggcaggccgagtttttcgcctgccgcggtcatggcctcgatcag                                                                                                                                                   >  4:247334‑M1/133‑134 (MQ=255)                  cgcagttcagcggcatcgacatcgcttgcaactgccatgcgcgcggcgcccagggctgtctgcaaggtcagttgggaggccgtttcgcgtggcaggccgagtttttcgcctgccgcggtcatggcctcgatcag                                                                                                                                                   <  3:247334‑M1/2‑1 (MQ=255)                       tGCCCAACACCCC‑GGCATTGCTGCGCCAAGGCGTGAGCGGCCTGTACGCCACCGCTGAAGTGTCCGGCGAACAGCGTCTGCAGGCCGAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGCAACTGGACGcc                                                                                                                              >  4:286450/1‑149 (MQ=255)                         cccAACACCCC‑GGCATTGCTGCGCCAAGGCGTGAGCGGCCTGTACGCCACCGCTGAAGTGTCCGGCGTACAGCGTCTGCAGGCCGAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAAc                                                                                                                                            <  6:406400/133‑1 (MQ=255)                         cccAACACCCC‑GGCATTGCTGCGCCAAGGCGTGAGCGGCCTGTACGCCACCGCTGAAGTGTCCGGCGTACAGCGTCTGCAGGCCGAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAAc                                                                                                                                            >  5:406400/1‑133 (MQ=255)                           cAACACCCC‑GTCATTGCTGCGCCAAGGCGTGAGCGGCCTGTACGCCACCGCTGAAGTGTCCGGCGAACAGCGTCTGCAGGCCGAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGTGa                                                                                                                          <  3:293535/149‑1 (MQ=255)                           cAACACCCC‑GGCATTGCTGCGCCAAGGCGTGAGCGGCCTGTACGCCACCGCTGAAGTGTCCGGCGAACAGCGTCTGCAGGCCGAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGTGa                                                                                                                          <  4:270880/149‑1 (MQ=255)                           cAACACCCC‑GGCATTGCTGCGCCAAGGCGTGAGCGGCCTGTACGCCACCGCTGAAGTGTCCGGCGAACAGCGTCTGCAGGCCGAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGTGa                                                                                                                          <  8:340772/149‑1 (MQ=255)                                cccc‑GGCATTGCTGCGCCAAGGCGTGAGCGGCCTGTACGCCACCGCTGAAGTGTCCGGCGAACAGCGTCTGCAGGCCGAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGTGACAGCt                                                                                                                     >  7:334303/1‑149 (MQ=255)                                 ccc‑GGCATTGCTGCGCCAAGGCGTGAGCGGCCTGTACGCCACCGCTGAAGTGTCCGGCGAACAGCGTCTGCAGGCCGAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGTGACAGCtg                                                                                                                    >  3:130905/1‑149 (MQ=255)                                               cgcCAAGGCGTGAGCGGCCTGTACGCCACCGCTGAAGTGTCCGGCGAACAGCGTCTGCAGGCCGAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTg                                                                                                        <  3:190280/148‑1 (MQ=255)                                               aactgccatgcgcgcggcgcccagggctgtctgcaaggtcagttgggaggccgtttcgcgtggcaggccgagtttttcgcctgccgcggtcatggcctcgatcAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTgg                                                                                                       <  6:128507‑M1/46‑1 (MQ=255)                                                ccgatatcGTGAGATGCCTGTACGCCACCGCTTAAGTGTCATGCTAACAGCGTCTGAATGCAGAACAACTTCTTTCTTCTGTAGGCACCGCACTGTGTCTGGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGGCCGGCa                                                                                                           <  8:103300/137‑1 (MQ=255)                                                 ccAAGGCGTGAGCGGCCTGTACGCCACCGCTGAAGTGTCCGGCGAACAGCGTCTGCAGGCCGAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTGGcc                                                                                                     >  1:284271/1‑149 (MQ=255)                                                  cAAGGCGTGAGCGGCCTGTACGCCACCGCTGAAGTGTCCGGCGAACAGCGTCTGCAGGCCGAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGt                                                                                                                            >  6:322901/1‑125 (MQ=255)                                                  cAAGGCGTGAGCGGCCTGTACGCCACCGCTGAAGTGTCCGGCGAACAGCGTCTGCAGGCCGAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGt                                                                                                                            <  5:322901/125‑1 (MQ=255)                                                     ggCGTGAGCGGCCTGTACGCCACCGCTGAAGTGTCCGGCGAACAGCGTCTGCAGGCCGAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTGGCCCGGc                                                                                                 <  3:122431/149‑1 (MQ=255)                                                        gTGAGCGGCCTGTACGCCACCGCTGAAGTGTCCGGCGAACAGCGTCTGCAGGCCGAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTGGCCCGGCGTa                                                                                              >  5:274291/1‑149 (MQ=255)                                                           aGCGGCCTGTACGCCACCGCTGAAGTGTCCGGCGAACAGCGTCTGCAGGCCGAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTGGCCCGGCGTActt                                                                                           <  4:207954/149‑1 (MQ=255)                                                                 cTGTACGCCACCGCTGAAGTGTCCGGCGAACAGCGTCTGCAGGCCGAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTGGCCCGGCGTACTTCTTCct                                                                                     >  3:143036/1‑149 (MQ=255)                                                                  tGTACGCCACCGCTGAAGTGTCCGGCGAACAGCGTCTGCAGGCCGAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTGGCCCGGCGTACTTCTTCctg                                                                                    >  5:262286/1‑149 (MQ=255)                                                                   gTACGCCACCGCTGAAGTGTCCGGCGAACAGCGTCTGCAGGCCGAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTGGCCCGGCGTACTTCTTCctgc                                                                                   >  1:15459/1‑149 (MQ=255)                                                                   gTACGCCACCGCTGAAGTGTCCGGCGAACAGCGTCTGCAGGCCGAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTGGCCCGGCGTACTTCTTCctgc                                                                                   <  3:107481/149‑1 (MQ=255)                                                                        ccACCGCTGAAGTGTCCGGCGAACAGCGTCTGCAGGCCGAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTGGCCCGGCGTACTTCTTCCTGCTGATc                                                                              <  2:250720/149‑1 (MQ=255)                                                                         cACCGCTGAAGTGTCCGGCGAACAGCGTCTGCAGGCCGAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTGGCCCGGCGTACTTCTTCCTGCTGATc                                                                              >  4:61248/1‑148 (MQ=255)                                                                          aCCGCTGAAGTGTCCGGCGAACAGCGTCTGCAGGCCGAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTGGCCCGGCGTACTTCTTCCTGCTGATCGa                                                                            <  3:61248/149‑1 (MQ=255)                                                                            tctgcaaggtcagttgggaggccgtttcgcgtggcaggccgagtttttcgcctgccgcggtcatggcctcgatcAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTGGCCCGGCGTACTTCTTCCTGCTGATCGAg                                                                           >  5:128507‑M1/75‑148 (MQ=255)                                                                            cGCTGAAGTGTCCGGCGAACAGCGTCTGCAGGCCGAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTGGCCCGGCGTACTTCTTCCTGCTGATCGAgg                                                                          <  2:15459/149‑1 (MQ=255)                                                                              cTGAAGTGTCCGGCGAACAGCGTCTGCAGGCCGAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTGGCCCGGCGTACTTCTTCCTGCTGATCGAGGcc                                                                        <  1:97449/149‑1 (MQ=255)                                                                                 aaggtcagttgggaggccgtttcgcgtggcaggccgagtttttcgcctgccgcggtcatggcctcgatcAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTGGCCCGGCGTACTTCTTCCTGCTGATCg                                                                             >  1:304869‑M1/70‑141 (MQ=255)                                                                                 aaggtcagttgggaggccgtttcgcgtggcaggccgagtttttcgcctgccgcggtcatggcctcgatcAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTGGCCCGGCGTACTTCTTCCTGCTGATCg                                                                             <  2:304869‑M1/72‑1 (MQ=255)                                                                                  aGTGTCCGGCGAACAGCGTCTGCAGGCCGAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTGGCCCGGCGTACTTCTTCCTGCTGATCGAGGCCATGa                                                                    <  2:284271/149‑1 (MQ=255)                                                                                    tgtCCGGCGTACAGCGTCTGCAGGCCGAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTg                                                                                                        >  4:127558/1‑111 (MQ=255)                                                                                    tgtCCGGCGTACAGCGTCTGCAGGCCGAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTg                                                                                                        <  3:127558/111‑1 (MQ=255)                                                                                        cGGCGAACAGCGTCTGCAGGCCGAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTGGCCCGGCGTACTTCTTCCTGCTGATCGAGGCCATGACCGCgg                                                              >  7:360677/1‑149 (MQ=255)                                                                                          gCGAACAGCGTCTGCAGGCCGAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTGGCCCGGCGTACTTCTTCCTGCTGATCGAGGCCATGACCGCgg                                                              >  7:244539/1‑147 (MQ=255)                                                                                             aaCAGCGTCTGCAGGCCGAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTTGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTGGCCCGGCGTACTTCTTCct                                                                                     <  8:372966/121‑1 (MQ=255)                                                                                             aaCAGCGTCTGCAGGCCGAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTGGCCCGGCGTACTTCTTCct                                                                                     >  7:372966/1‑121 (MQ=255)                                                                                                aGCGTCTGCAGGCCGAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTGGCCCGGCGTACTTCTTCCTGCTGATCGAGGc                                                                         >  4:93611/1‑130 (MQ=255)                                                                                                aGCGTCTGCAGGCCGAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTGGCCCGGCGTACTTCTTCCTGCTGATCGAGGc                                                                         <  3:93611/130‑1 (MQ=255)                                                                                                aGCGTCTGCAGGCCGAACAACTGCTGTCGGCTGTAGGCACCGCCCGGTGGCTGGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTGGCCCGGCGTACTTCTTCCTACTGATCGAGGCCATGACCGCGGCAGGCGa                                                       >  1:85723/1‑148 (MQ=255)                                                                                                  cGTCTGCAGGCCGAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTGGCCCGGCGTACTTCTTCCTGCTGATCGAGGCCATGACCGCGGCAGGCGaaaa                                                    <  6:274291/149‑1 (MQ=255)                                                                                                        cAGGCCGAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTGGCCCGGCGTACTTCTTCCTGCTGATCGAGGCCATGACCGCGGCAGGCGAAAAACTCgg                                              >  5:414316/1‑149 (MQ=255)                                                                                                        cAGGCCGAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTGGCCCGGCGTACTTCTTCCTGCTGATCGAGGCCATGACCGCGGCAGGCGAAAAACTCgg                                              <  2:105011/149‑1 (MQ=255)                                                                                                        cAGGCCGAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTGGCCCGGCGTACTTCTTCCTGCTGATCGAGGCCATGACCGCGGCAGGCGAAAAACTCg                                               <  4:1031/148‑1 (MQ=255)                                                                                                        cAGGCCGAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTGGCCCGGCGTACTTCTTCCTGCTGATCGAGGCCATGACCGCGGCAGGCGAAAAACTCg                                               <  4:130905/148‑1 (MQ=255)                                                                                                        cAGGCCGAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTGGCCCGGCGTACTTCTTCCTGCTGATCGAGGCCATGACCGCGGCAGGCGAAAAACTCg                                               <  7:179407/148‑1 (MQ=255)                                                                                                          ggCCGAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTGGCCCGGCGTa                                                                                              >  2:393240/1‑99 (MQ=255)                                                                                                          ggCCGAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTGGCCCGGCGTa                                                                                              <  1:393240/99‑1 (MQ=255)                                                                                                           gCCGAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTg                                                                                                        <  4:376839/88‑1 (MQ=255)                                                                                                           gCCGAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTg                                                                                                        >  3:376839/1‑88 (MQ=255)                                                                                                           gCCGAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTGGCCCGGCGTACTTCTTCCTGCTGATCGAGGCCATGACCGCGGCAGGCGAAAAACTCGGCCt                                           >  7:127272/1‑149 (MQ=255)                                                                                                           gCCGAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTGGCCCGGCGTACTTCTTCCTGCTGATCGAGGCCATGACCGCGGCAGGCGAAAAACTCGGCCt                                           >  1:396424/1‑149 (MQ=255)                                                                                                             cGAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTGGCCCGGCGTACTTCTTCCTGCTGATCGAGGCCATGACCGCGGCAGGCGAAAAACTCGGCCt                                           >  4:68016/1‑147 (MQ=255)                                                                                                             cGAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTGGCCCGGCGTACTTCTTCCTGCTGATCGAGGCCATGACCGCGGCAGGCGAAAAACTCGGCCt                                           <  3:68016/147‑1 (MQ=255)                                                                                                              gAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTGGCCCGGCGTACTTCTTCCTGCTGATCGAGGCCATGACCGCGGCAGGCGAAAAACTCGGCCTGcc                                        >  7:125604/1‑149 (MQ=255)                                                                                                                acaacTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTGGCCCGGCGTACttcttc                                                                                       >  8:275279/1‑100 (MQ=255)                                                                                                                acaacTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTGGCCCGGCGTACttcttc                                                                                       <  7:275279/100‑1 (MQ=255)                                                                                                                acaacTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTGGCCCGGCGTACTTCTTCCTGCTGATCGAGGCCATGACCGCGGCAGGCGAAAAACTCGGCCTGCCAc                                      >  7:60243/1‑149 (MQ=255)                                                                                                                     tgctgTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTGGCCCGGCGTACTTCTTCCTGCTGATCGAGGCCATGACCGCGGCAGGCGAAAAACTCGGCCTGCCAc                                      >  7:166755/1‑144 (MQ=255)                                                                                                                     tgctgTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTGGCCCGGCGTACTTCTTCCTGCTGATCGAGGCCATGACCGCGGCAGGCGAAAAACTCGGCCTGCCAc                                      <  8:166755/144‑1 (MQ=255)                                                                                                                          tCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTGGCCCGGCGTACTTCTTCCTGCTGATCGAGGCCATGACCGCGGCAGGCGAAAAACTCGGCCTGCCACGCGAAACGGc                            >  5:100637/1‑149 (MQ=255)                                                                                                                               tGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTGGCCCGGCGTACTTCTTCCTGCTGATCGAGGCCATGACCGCGGCAGGc                                                         >  3:303365/1‑115 (MQ=255)                                                                                                                               tGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTGGCCCGGCGTACTTCTTCCTGCTGATCGAGGCCATGACCGCGGCAGGc                                                         <  4:303365/115‑1 (MQ=255)                                                                                                                                    gCACCGCCCTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTGGCCCGGCGTACTTCTTCCTGCTGATCGAGGCCATGACCGCGGCAGGCGAAAAACTCGGCCTGCCACGCGAAACGGCCTCCCAACt                   <  8:244539/148‑1 (MQ=255)                                                                                                                                    gCACCGCCCTGTGGCTGGAGCAGGAACAGCAACTGAACGCCGTGACAGCTGTGTCCGGCAGTGGCCCGGCGTACTTCTTCCTGCTGATCGAGGCCATGACCGCGGCAGGCGAAAAACTCGGCCTGCCACGCGAAACGGCCTCCCAACt                   >  5:211852/1‑148 (MQ=255)                                                                                                                                      aCCGCCCTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTGGCCCGGCGTACTTCTTCCTGCTGATCGAGGCCATGACCGCGGCAGGCGAAAAACTCGGCCTGCCACGCGAAACGGCCTCCCAACTGAc                >  5:29089/1‑149 (MQ=255)                                                                                                                                          cccTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTGGCCCGGCGTACTTCTTCCTGCTGATCGAGGCCATGACCGCGGCAGGCGAAAAACTCGGCCTGCCACGCGAAACGGCCTCCCAACTGACCTTg            <  8:125604/149‑1 (MQ=255)                                                                                                                                          cccTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTGGCCCGGCGTACTTCTTCCTGCTGATCGAGGCCATGACCGCGGCAGGCGAAAAACTCGGCCTGCCACGCGAAACGGCCTCCCAACTGACCTTg            <  4:143036/149‑1 (MQ=255)                                                                                                                                          cccTGTGGCTGGAGCAGGAACAGCAACTGAACGCCGTGACAGCTGTGTCCGGCAGTGGCCCGGCGTACTTCTTCCTGCTGATCGAGGCCATGACCGCGGCAGGCGAAAAACTCGGCCTGCCACGCGAAACGGCCTCCCAACTGACCTTg            <  6:211852/149‑1 (MQ=255)                                                                                                                                               tgGCTGGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTGGCCCGGCGTACTTCTTCCTGCTGATCGAGGCCATGACCGCGGCAGGCGAAAAACTCGGCCTGCCACGCGAAACGGCCTCCCAACTGACCTTGCAGa        >  1:301626/1‑148 (MQ=255)                                                                                                                                                 gCTGGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTGGCCCGGCGTACTTCTTCCTGCTGATCGAGGCCATGACCGCGGCAGGCGAAAAACTCGGCCTGCCACGCGAAACGGCCTCCCAACTGACCTTGCAGACAg     <  6:414316/149‑1 (MQ=255)                                                                                                                                                   tGGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTGGCCCGGCGTACTTCTTCCTGCTGATCGAGGCCATGACCGCGGCAGGCGAAAAACTCGGCCTGCCACGCGAAACGGCCTCCCAACTGACCTTg            >  7:46611/1‑140 (MQ=255)                                                                                                                                                   tGGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTGGCCCGGCGTACTTCTTCCTGCTGATCGAGGCCATGACCGCGGCAGGCGAAAAACTCGGCCTGCCACGCGAAACGGCCTCCCAACTGACCTTg            <  8:46611/140‑1 (MQ=255)                                                                                                                                                     gAGCAGTAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTGGCCCGGCGTACTTCTTCCTGCTGATCGAGGCCATGACCGCGGCAGGCGAAAAACTCGGCCTGCCACGCGAAACGGCCTCCCAACTGACCTTGCAGACAGccc  <  6:185952/148‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                   GCTCGCCCGGTGGTGCGCTGCATGCCCAACACCCC‑GGCATTGCTGCGCCAAGGCGTGAGCGGCCTGTACGCCACCGCTGAAGTGTCCGGCGAACAGCGTCTGCAGGCCGAACAACTGCTGTCGGCTGTAGGCACCGCCCTGTGGCTGGAGCAGGAACAGCAACTGGACGCCGTGACAGCTGTGTCCGGCAGTGGCCCGGCGTACTTCTTCCTGCTGATCGAGGCCATGACCGCGGCAGGCGAAAAACTCGGCCTGCCACGCGAAACGGCCTCCCAACTGACCTTGCAGACAGCCC  >  NC_002947/5819062‑5819356

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.