New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 566276 = | 59 (0.920) | 3 (0.050) | 3/242 | NT | 5.3% | coding (153/465 nt) | bfr‑I | bacterioferritin |
? | NC_002947 | 566305 = | 52 (0.850) | coding (182/465 nt) | bfr‑I | bacterioferritin |
TGCTGAAGGGCGAACTGGCGGCACGCGACCAGTACTTCATTCATTCGCGCATGTACGAAGACTGGGGCCTGTCCAAGCTCTACGAGCGCATCAACCACGAGATGGAGGAAGAGACGC‑AGCACGCCGATGCCCTGATGCGTCGTATCCTCATGCTCGAAGGCACCCCTGACATGCGTGCGGATGACCTGGAGGTTGGTAGCACCGTGCCGGAAATGATCGAGGCGGACCTCAAGCTCGAATACAAGGTGCGCGGTGCGCTTTGCAAAGGCATCGAGCTGTGCGAACTGC > NC_002947/566164‑566451 | tgctgAAGGGCGAACTGGCGGCACGCGACCAGTACTTCATTCATTCGCGCATGTACGAAGACTGGGGCCTGTCCAAGCTCTACGAGCGCATCAACCACGAGATGGAGGAAGAGACGC‑AGCACGCCGATGCCCTGATGCGTCGTATcc < 8:121011/147‑1 (MQ=255) ccgcgcaccttgtattcgagcttgaggtccgcctcgatcatttccggcacggtgctaccaacctccaggtcatccgcacgcatgtcaggggtgccttcgagcatgaggatacGACGC‑AGCACGCCGATGCCCTGATGCGTCGTATCCTc > 4:148970‑M1/113‑149 (MQ=255) ctgAAGGGCGAACTGGCGGCACGCGACCAGTACTTCATTCATTCGCGCATGTACGAAGACTGGGGCCTGTCCAAGCTCTACGAGCGCATCAACCACGAGATGGAGGAAGAGACGC‑AGCACGCCGATGCCCTGATGCGTCGTATCCTc < 3:186668/147‑1 (MQ=255) gggCGAACTGGCGGCACGCGACCAGTACTTCATTCATTCGCGCATGTACGAAGACTGGGGCCTGTCCAAGCTCTACGAGCGCATCAACCACGAGATGGAGGAAGAGACGC‑AGCACGCCGATGCCCTGATGCGTCGTATCCTCATGCTCg < 6:158500/149‑1 (MQ=255) gCGAACTGGCGGCACGCGACCAGTACTTCATTCATTCGCGCATGTACGAAGACTGGGGCCTGTCCAAGCTCTACGAGCGCATCAACCACGAGATGGAGGAAGAGACGC‑AGCACGCCGATGCCCTGATGCGTCGTATCCTCATGCTCGaa < 2:107600/149‑1 (MQ=255) gCGAACTGGCGGCACGCGACCAGTACTTCATTCATTCGCGCATGTACGAAGACTGGGGCCTGTCCAAGCTCTACGAGCGCATCAACCACGAGATGGAGGAAGAGACGC‑AGCACGCCGATGCCCTGATGCGTCGTATCCTCATGCTCGaa < 3:240964/149‑1 (MQ=255) cGAACTGGCGGCACGCGACCAGTACTTCATTCATTCGCGCATGTACGAAGACTGGGGCCTGTCCAAGCTCTACGAGCGCATCAACCACGAGATGGAGGAAGAGACGC‑AGCACGCCGATGCCCTGATGCGTCGTATCCTCATGCTCGAAg < 6:32116/149‑1 (MQ=255) aaCTGGCGGCACGCGACCAGTACTTCATTCATTCGCGCATGTACGAAGACTGGGGCCTGTCCAAGCTCTACGAGCGCATCAACCACGAGATGGAGGAAGAGACGC‑AGCACGCCGATGCCCTGATGCGTCGTATCCTc < 6:68412/137‑1 (MQ=255) aaCTGGCGGCACGCGACCAGTACTTCATTCATTCGCGCATGTACGAAGACTGGGGCCTGTCCAAGCTCTACGAGCGCATCAACCACGAGATGGAGGAAGAGACGC‑AGCACGCCGATGCCCTGATGCGTCGTATCCTc > 5:68412/1‑137 (MQ=255) cTGGCGGCACGCGACCAGTACTTCATTCATTCGCGCATGTACGAAGACTGGGGCCTGTCCAAGCTCTACGAGCGCATCAACCACGATATGGAGGAAGAGACGC‑AGCACGCCGATGCCCTGATGCGTCGTATCCTCATGCTCGAAGGCAc < 8:51186/149‑1 (MQ=255) tGGCGGCACGCGACCAGTACTTCATTCATTCGCGCATGTACGAAGACTGGGGCCTGTCCAAGCTCTACGAGCGCATCAACCACGAGATGGAGGAAGAGACGC‑AGCACGCCGATGCCCTGATGCGTCGTATCCTCATGCTCGAAGGCAcc > 1:28200/1‑149 (MQ=255) gcACGCGACCAGTACTTCATTCATTCGCGCATGTACGAAGACTGGGGCCTGTCCAAGCTCTACGAGCGCATCAACCACGAGATGGAGGAAGAGACGC‑AGCACGCCGATGCCCTGATGCGTCGTATCCTCATGCTCGAAGGCACCCCTGa > 7:202703/1‑149 (MQ=255) gcACGCGACCACTACTTCATTTATTCGCTCATGTACGAAGACTGGGGCCTGTCCAAGCTCTACGAGCGCATCAACCACGAGATGGATGAAGAGACGC‑AGCACGCCGATGCCCTGATGCGTCGTATCCTCATGCTCGAAGGCACCCCTGa < 5:353828/149‑1 (MQ=255) cttgaggtccgcctcgatcatttccggcacggtgctaccaacctccaggtcatccgcacgcatgtcaggggtgccttcgagcatgaggatacGACGC‑AGCACGCCGATGCCCTGATGCGTCGTa < 1:5965‑M1/32‑1 (MQ=255) cttgaggtccgcctcgatcatttccggcacggtgctaccaacctccaggtcatccgcacgcatgtcaggggtgccttcgagcatgaggatacGACGC‑AGCACGCCGATGCCCTGATGCGTCGTa > 2:5965‑M1/93‑124 (MQ=255) cAGTACTTCATTCATTCGCGCATGTACGAAGACTGGGGCCTGTCCAAGCTCTACGAGCGCATCAACCACGAGATGGAGGAAGAGACGC‑AGCACGCCGATGCCCTGATGCGTCGTATCCTCATGCTCGAAGGCACCCCTGACAtgcgtgc > 1:4682/1‑149 (MQ=255) ttcattcaTTCGCGCATGTACGAAGACTGGGGCCTGTCCAAGCTCTACGAGCGCATCAACCACGAGATGGAGGAAGAGACGC‑AGCACGCCGATGCCCTGATGCGTCGTATCCTCATGCTCGAAGGCACCCCTGACATGCGTGCGGATGa > 3:106143/1‑149 (MQ=255) attcattcGCGCATGTACGAAGACTGGGGCCTGTCCAAGCTCTACGAGCGCATCAACCACGAGATGGAGGAAGAGACGC‑AGCACGCCGATGCCCTGATGCGTCGTATCCTCATGCTCGAAGGCAccc > 4:255396/1‑127 (MQ=255) attcattcGCGCATGTACGAAGACTGGGGCCTGTCCAAGCTCTACGAGCGCATCAACCACGAGATGGAGGAAGAGACGC‑AGCACGCCGATGCCCTGATGCGTCGTATCCTCATGCTCGAAGGCAccc < 3:255396/127‑1 (MQ=255) attcGCGCATGTACGAAGACTGGGGCCTGTCCAAGCTCTACGAGCGCATCAACCACGAGATGGAGGAAGAGACGC‑AGCACGCCGATGCCCTGATGCGTCGTATCCTCATGCTCGAAGGCACCCCTGACAtgcgtg < 5:386913/135‑1 (MQ=255) attcGCGCATGTACGAAGACTGGGGCCTGTCCAAGCTCTACGAGCGCATCAACCACGAGATGGAGGAAGAGACGC‑AGCACGCCGATGCCCTGATGCGTCGTATCCTCATGCTCGAAGGCACCCCTGACAtgcgtg > 6:386913/1‑135 (MQ=255) gcgcATGTACGAAGACTGGGGCCTGTCCAAGCTCTACGAGCGCATCAACCACGAGATGGAGGAAGAGACGC‑AGCACGCCGATGCCCTGATGCGTCGTATCCTCATGCTCGAAGGCACCCCTGACATGCGTGCGGATGACCTGGAGGtt < 2:28200/148‑1 (MQ=255) gcgcATGTACGAAGACTGGGGCCTGTCCAAGCTCTACGAGCGCATCAACCACGAGATGGAGGAAGAGACGC‑AGCACGCCGATGCCCTGATGCGTCGTATCCTCATGCTCGAAGGCACCCCTGACATGCGTGCGGATGACCTGGAGGTTg < 7:68433/149‑1 (MQ=255) cgcATGTACGAAGACTGGGGCCTGTCCAAGCTCTACGAGCGCATCAACCACGAGATGGAGGAAGAGACGC‑AGCACGCCGATGCCCTGATGCGTCGTATCCTCATGCTCGAAGGCACCCCTGACATGCGTGCGGATGACCTGGAGGTTgg < 8:150824/149‑1 (MQ=255) gAAGACTGGGGCCTGTCCAAGCTCTACGAGCGCATCAACCACGAGATGGAGGAAGAGACGC‑AGCACGCCGATGCCCTGATGCGTCGTATCCTCATGCTCGAAGGCACCCCTGACATGCGTGCGGATGACCTGGAGGTTGGTAGCACCGt > 3:369617/1‑149 (MQ=255) gggCCTGTCCAAGCTCTACGAGCGCATCAACCACGAGATGGAGGAAGAGACGC‑AGCACGCCGATGCCCTGATGCGTCATATCCTCATGCTCGAAGGCACCCCTGACATGCGTGCGGATGACCTGGAGGTTGGTAGCAcc > 7:379061/1‑139 (MQ=255) gggCCTGTCCAAGCTCTACGAGCGCATCAACCACGAGATGGAGGAAGAGACGC‑AGCACGCCGATGCCCTGATGCGTCATATCCTCATGCTCGAAGGCACCCCTGACATGCGTGCGGATGACCTGGAGGTTGGTAGCAcc < 8:379061/139‑1 (MQ=255) gggCCTGTCCAAGCTCTAAGAGCGCATCAACCACGAGATGGAGGAAGAGACGC‑AGCACGCCGATGCCCTGATGCGTCGTATCCTCATGCTCGAAGGCACCCCTGACATGCTTGCGGATGACCTGGAGGTTGGTAGCACCGTGCCGGaa < 3:332303/148‑1 (MQ=255) tCCAAGCTCTACGAGCGCATCAACCACGAGATGGAGGAAGAGACGCGAGCACGCCGATGCCCTGATGCGTCGTATCCTCATGCTCGAAGGCACCCCTGACATGCGTGCGGATGACCTGGAGGTTGGTAGCACCGTGCCGGAAATGATc > 1:90224/1‑148 (MQ=255) tCCAAGCTCTACGAGCGCATCAACCACGAGATGGAGGAAGAGACGC‑AGCACGCCGATGCCCTGATGCGTCGTATCCTCATGCTCGAAGGCACCCCTGACATGCGTGCGGATGACCTGGAGGTTgg > 1:277107/1‑125 (MQ=255) tCCAAGCTCTACGAGCGCATCAACCACGAGATGGAGGAAGAGACGC‑AGCACGCCGATGCCCTGATGCGTCGTATCCTCATGCTCGAAGGCACCCCTGACATGCGTGCGGATGACCTGGAGGTTgg < 2:277107/125‑1 (MQ=255) tCCAAGCTCTACGAGCGCATCAACCACGAGATGGAGGAAGAGACGC‑AGCACGCCGATGCCCTGATGCGTCGTATCCTCATGCTCGAAGGCACCCCTGACATGCGTGCGGATGACCTGGAGGTTGGTAGCACCGTGCCGGAAATGATCGa < 3:218984/149‑1 (MQ=255) ccAAGCTCTACGAGCGCATCAACCACGAGATGGAGGAAGAGACGC‑AGCACGCCGATGCCCTGATGCGTCGTATCCTCATGCTCGAAGGCACCCCTGACATGCGTGCGGATGACCTGGAGGTTGGTAGCACCGTGCCGGAAATGATCGAg > 2:266969/1‑149 (MQ=255) cAAGCTCTACGAGCGCATCAACCACGAGATGGAGGAAGAGACGC‑AGCACGCCGATGCCCTGATGCGTCGTATCCTCATGCTCGAAGGCACCCCTGACATGCGTGCGGATGACCTGGAGGTTGGTAGCACCGTGCCGGAAATGATCGAgg > 6:119921/1‑149 (MQ=255) tACGAGCGCATCAACCACGAGATGGAGGAAGAGACGC‑AGCACGCCGATGCCCTGATGCGTCGTATCCTCATGCTCGAAGGCACCCCTGACATGCGTGCGGATGACCTGGAGGTTGGTAGCACCGTGCCGGAAATGATCGAGGCGGACCt > 7:371765/1‑149 (MQ=255) cGAGCGCATCAACCACGAGATGGAGGAAGAGACGC‑AGCACGCCGATGCCCTGATGCGTCGTATCCTCATGCTCGAAGGCACCCCTGACATGCGTGCGGATGACCTGGAGGTTGGTAGCACCGTGCCGGAAATGATCGAGGCGGACCTc < 5:119921/148‑1 (MQ=255) gcATCAACCACGAGATGGAGGAAGAGACGC‑AGCACGCCGATGCCCTGATGCGTCGTATCCTCATGCTCGAAGGCACCCCTGACATGCGTGCGGATGACCTGGAGGTTGGTAGCACCGTGCCGGAAATGATCGAGGCGGACCTCAAGCTc < 4:369617/149‑1 (MQ=255) ccAAGAGATGGAGGAAGAGACGC‑AGCACGCCGATGCCCTGATGCGTCGTATCCTCCTGCTCGAAGGCACCCCTGACATGCGTGCGGATGACCTGGAGGTTGGTAGCACCGTGCCGGAAATGATAGACTCGGACCTCAAGCTCGAATAc > 5:423688/1‑148 (MQ=255) cACGAGATGGAGGAAGAGACGC‑AGCACGCCGATGACCTGATGCGTCCTATCCTCATGCTCGAAGGCACCCCTGACATGCGTGCGGATGACCTGGAGGTTGGTAGAACCGTGCCGGAAATGATCGAGGCGGACCTCAAGCTCGAATAc > 3:272650/1‑147 (MQ=255) aCGAGATGGAGGAAGAGACGC‑AGCACGCCGATGCCCTGATGCGTCGTATCCTCATGCTCGAAGGCACCCCTGACATGCGTGCGGATGACCTGGAGGTTGGTAGCACCGTGCCGGAAATGATCGAGGCGGACCTCAAGCTCGAATACAAg < 2:90224/149‑1 (MQ=255) gagaTGGAGGAAGAGACGC‑AGCACGCCGATGCCCTGATGCGTCGTATCCTCATTCTCGAAGGCACCCCTGACATGCGTGCGGATGACCTGGAGGTTGGTAGCACCGTGCCGGAAATGATCGAGGCGGACCTCAAGCTCGAATACAAggt < 8:202703/149‑1 (MQ=255) gaTGGAGGAAGAGACGC‑AGCACGCCGATGCCCTGATGCGTCGTATCCTCATGCTCGAAGGCACCCCTGACATGCGTGCGGATGACCTGGAGGTTGGTAGCACCGTGCCGGAAATGATCGAGGCGGACCTCAAGCTCGAATACaa > 3:136302/1‑144 (MQ=255) gaTGGAGGAAGAGACGC‑AGCACGCCGATGCCCTGATGCGTCGTATCCTCATGCTCGAAGGCACCCCTGACATGCGTGCGGATGACCTGGAGGTTGGTAGCACCGTGCCGGAAATGATCGAGGCGGACCTCAAGCTCGAATACaa < 4:136302/144‑1 (MQ=255) gaTGGAGGAAGAGACGC‑AGCACGCCGATGCCCTGATGCGTCGTATCCTCATGCTCGAAGGCACCCCTGACATGCGTGCGGATGACCTGGAGGTTGGTAGCACCGTGCCGGAAATGATCGAGGCGGACCTCAAGCTCGAATACAAggtgc < 8:371765/149‑1 (MQ=255) aTGGAGGAAGAGACGC‑AGCACGCCGATGCCCTGATGCGTCGTATCCTCATGCTCGAAGGCACCCCTGACATGCGTGCGGATGACCTGGAGGTTGGTAGCACCGTGCCGGAAATGATCGAGGCGGACCTCAAGCTCGAATACAAggtgcg > 2:376240/1‑149 (MQ=255) gaggaAGAGACGC‑AGCACGCCGATGCCCTGATGCGTCGTATCCTCATGCTCGAAGGCACCCCTGACATGCGTGCGGATGACCTGGAGGTTGGTAGCACCGTGCCGGAAATGATCGAGGCGGACCTCAAGCTCGAATACAAggtgcgcgg > 7:37321/1‑149 (MQ=255) gaggatacgacgcatcagggcatcggcgtgctgcgtcGTATCCTCATGCTCGAAGGCACCCCTGACATGCGTGCGGATGACCTGGAGGTTGGTAGCACCGTGCCGGAAATGATCGAGGCGGACCTCAAGCTCGAATACAAggtgcgcgg > 4:148970‑M2/38‑149 (MQ=255) aggaAGAGACGC‑AGCACGCCGATGCCCTGATGCGTCGTATCCTCATGCTCGAAGGCACCCCTGACATGCGTGCGGATGACCTGGAGGTTGGTAGCACCGTGCCGGAAATGATCGAGGCGGACCTCAAGCTCGAATACAAggtgcgcggt < 4:106143/149‑1 (MQ=255) ggaAGAGACGC‑AGCACGCCGATGCCCTGATGCGTCGTATCCTCATGCTCGAAGGCACCCCTGACATGCGTGCGGATGACCTGGAGGTTGGTAGCACCGTGCCGGAAATGATCGAGGCGGACCTCAAGCTCGAATACAAggtgcgcggtg > 2:373111/1‑149 (MQ=255) gaAGAGACGC‑AGCACGCCGATGCCCTGATGCGTCGTATCCTCATGCTCGAAGGCACCCCTGACATGCGTGCGGATGACCTGGAGGTTGGTAGCACCGTGCCGGAAATGATCGAGGCGGACCTCAAGCTCGAATACAAggtgcgcggtgc < 2:4682/149‑1 (MQ=255) gaAGAGACGC‑AGCACGCCGATGCCCTGATGCGTCGTATCCTCATGCTCGAAGGCACCCCTGACATGCGTGCGGATGACCTGGAGGTTGGTAGCACCGTGCAGGAAATGATCGAGGCGGACCTCAAGCTCGAATACAAggtgcgcggtgc > 5:209755/1‑149 (MQ=255) agagACGC‑AGCACGCCGATGCCCTGATGCGTCGTATCCTCATGCTCGAAGGCACCCCTGACATGCGTGCGGATGACCTGGAGGTTGGTAGCACCGTGCCGGAAATGATCGAGGCGGACCTCAAGCTCGAATACAAggtgcgcggtgcgc > 4:261794/1‑149 (MQ=255) tacgacgcatcagggcatcggcgtgctgcgtcGTATCCTCATGCTCGAAGGCACCCCTGACATGCGTGCGGATGACCTGGAGGTTGGTAGCACCGTGCCGGAAATGATCGAGGCGGACCTCAAg < 1:5965‑M2/92‑1 (MQ=255) tacgacgcatcagggcatcggcgtgctgcgtcGTATCCTCATGCTCGAAGGCACCCCTGACATGCGTGCGGATGACCTGGAGGTTGGTAGCACCGTGCCGGAAATGATCGAGGCGGACCTCAAg > 2:5965‑M2/33‑124 (MQ=255) GACGC‑AGCACGCCGATGCCCTGATGCGTCGTATCCTCATGCTCGAAGGCACCCCTGACATGCGTGCGGATGACCTGGAGGTTGGTAGCACCGTGCCGGAAATGATCGAGGCGGACCTCAAGCTCGAATACAAGGTGCGCGGTGCGCttt < 1:114467‑M1/149‑1 (MQ=255) GC‑AGCACGCCGATGCCCTGATGCGTCGTATCCTCATGCTCGAAGGCACCCCTGACATGCGTGCGGATGACCTGGAGGTTGGTAGCACCGTGCCGGAAATGATCGAGGCGGACCTCAAGCTCGAATACAAGGTGCGCGGTGCGCTTTGc < 8:383075‑M1/148‑1 (MQ=255) gcaCGCCGATGCCCTGATGCGTCGTATCCTCATGCTCGAAGGCACACCTGACATGCGTGCGGATGACCTGGAGGTTGGTAGCACCGTGACGGAAATGATCGAGGCGGACCTCAAGCTCGAATACAAGGTGCGCGGTGCGCTTTGCAAAg > 2:124109/1‑149 (MQ=255) aCGCCGATGCCCTGATGCGTCGTATCCTCATGCTCGAAGGCACCCCTGACATGCGTGCGGATGACCTGGAGGTTGGTAGCACCGTGCCGGAAATGATCGAGGCGGACCTCAAGCTCGAATACAAGGTGCGCGGTGCGCTTTGCAAAgg > 3:29653/1‑148 (MQ=255) gCCGATGCCCTGATGCGTCGTATGCTCATTCTCGAAGGCACCCGTGACATGCGTGCGGATGACCTGGAGGTTGGTAGCACCTTGCCGGAAATGATCGAGGCGGACCTCAAGCTCGAATACAAGGTGCGCGGTGCGCTTTGCAAAGGc < 6:423688/147‑1 (MQ=255) cGATGCCCTGATGCGTCGTATCCTCATGCTCGAAGGCACCCCTGACATGCGTGCGGATGACCTGGAGGTTGGTAGCACCGTGCCGGAAATGATCGAGGCGGACCTCAAGCTCGAATACAAGGTGCGCGGTGCGCTTTGCAAAGGCATc > 4:145846/1‑148 (MQ=255) ccTGATGCGTCGTATCCTCATGCTCGAAGGCACCCCTGACATGCGTGCGGATGACCTGGAGGTTGGTAGCACCGTGCCGGAAATGATCGAGGCGGACCTCAAGCTCGAATACAAGGTGCGCGGTGCGCTTTGCAAAGGCATCGAGCtgt < 6:209755/149‑1 (MQ=255) cgtcGTATCCTCATGCTCGAAGGCACCCCTGACATGCGTGCGGATGACCTGGAGGTTGGTAGCACCGTGCCGGAAATGATCGAGGCGGACCTCAAGCTCGAATACAAGGTGCGCGGTGCGCTTTGCAAAGGCATCGAGCTGTGCGAAc < 4:29653‑M2/144‑1 (MQ=255) tcGTATCCTCATGCTCGAAGGCACCCCTGACATGCGTGCGGATGACCTGGAGGTTGGTAGCACCGTGCCGGAAATGATCGAGGCGGACCTCAAGCTCGAATACAAGGTGCGCGGTGCGCTTTGCAAAGGCATCGAGCTGTGCGAACTGc < 8:37321‑M2/147‑1 (MQ=255) | TGCTGAAGGGCGAACTGGCGGCACGCGACCAGTACTTCATTCATTCGCGCATGTACGAAGACTGGGGCCTGTCCAAGCTCTACGAGCGCATCAACCACGAGATGGAGGAAGAGACGC‑AGCACGCCGATGCCCTGATGCGTCGTATCCTCATGCTCGAAGGCACCCCTGACATGCGTGCGGATGACCTGGAGGTTGGTAGCACCGTGCCGGAAATGATCGAGGCGGACCTCAAGCTCGAATACAAGGTGCGCGGTGCGCTTTGCAAAGGCATCGAGCTGTGCGAACTGC > NC_002947/566164‑566451 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |