New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	867908 =	63 (0.980)	5 (0.080)	5/246	NT	8.5%	intergenic (+6/+171)	PP_0750/mqo‑I	hypothetical protein/malate:quinone oxidoreductase
	?	NC_002947	868022 =	46 (0.740)					intergenic (+120/+57)	PP_0750/mqo‑I	hypothetical protein/malate:quinone oxidoreductase

TCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGC‑ATGCCCGCGAAG‑‑‑‑‑AGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTT‑GCGTTTCAGACCGGCTTAAGCGTAGT‑GCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTGATCTTGTGGTACAGCGCAGCAT  >  NC_002947/867880‑868167                                                                                                                                                     |                                                                                                                                                    tcatcGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTATTCGCGGGCGCGCCCCCAACCACAGGAGTCGCGCCCCACCTGCGGGGCATACCGAACCGGTGGGAGCCGGC‑ATGCCCCCCAAG‑‑‑‑‑AGGGCGGTACCGGCTGATCAAg                                                                                                                                               >  6:123564/1‑149 (MQ=255)     cGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGC‑ATGCCCGCGAAG‑‑‑‑‑AGGGCGGTACAGGCTGATCAAGCGcc                                                                                                                                           <  5:340683/149‑1 (MQ=255)       aTAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGC‑ATGCCCGCGAAG‑‑‑‑‑AGGGCGGTACAGGCTGATCAAGCGCCAg                                                                                                                                         <  5:123564/149‑1 (MQ=255)                 tGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGC‑ATGCCCGCGAAG‑‑‑‑‑AGGGCGGTACAGGCTGATCAAGCGCCAGGCACaaaaaa                                                                                                                               <  5:381782/149‑1 (MQ=255)                     tGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGC‑ATGCCCGCGAAG‑‑‑‑‑AGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGcc                                                                                                                           >  8:296453/1‑149 (MQ=255)                       aTCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGC‑ATGCCCGCGAAG‑‑‑‑‑AGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGcc                                                                                                                           <  5:117786/147‑1 (MQ=255)                            tAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGC‑ATGCCCGCGAAG‑‑‑‑‑AGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAggg                                                                                                                    <  8:45687/149‑1 (MQ=255)                               CCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCCCCTGCGGGCCTTACCGCACCGGTGGGAGCGGGG‑ATGCCCGCGAAG‑‑‑‑‑AGGGGGGGACCGGCTGGTCAAGCGCCAGGCACAAAAAACGCCCCgagggggg                                                                                                                 <  1:325912‑M1/149‑3 (MQ=255)                                  gTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGC‑ATGCCCGCGAAG‑‑‑‑‑AGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAg                                                                                                                      <  1:250532/141‑1 (MQ=255)                                    gCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGGCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGC‑ATGCCCGCGAAG‑‑‑‑‑AGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCTCGGGGCGttttt                                                                                                            <  7:27638/149‑1 (MQ=255)                                      cgcccTCTCCCCGGGCGCGCCCGCTCCCCCGGGCGGCGCGCCGCACCTGGGGGCATTACCGCACCTGGGGGAGCGGGC‑ATGCCCGCGAAG‑‑‑‑‑AGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTT‑Gc                                                                                                         <  1:405168/146‑1 (MQ=255)                                      cGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGC‑ATGCCCGCGAAG‑‑‑‑‑AGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGtttttcg                                                                                                          >  2:244175/1‑147 (MQ=255)                                             ttCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGC‑ATGCCCGCGAAG‑‑‑‑‑AGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTT‑GCGttt                                                                                                     >  5:190795/1‑146 (MQ=255)                                               cgcgGGCGCGCCCGCTCCCACTGGAGTCGCGCCGCACCTGGGGGCATTACCGAACCTGTGGGAGGGGGA‑ATGCCCGCGAAG‑‑‑‑‑AGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTT‑GCGTTTCa                                                                                                   <  1:193548/146‑1 (MQ=255)                                                      gcgcCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGC‑ATGCCCGCGAAG‑‑‑‑‑AGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTT‑GCGTTTCAGACCGGCtt                                                                                          >  4:268295/1‑148 (MQ=255)                                                       cgcCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGC‑ATGCCCGCGAAG‑‑‑‑‑AGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTT‑GCGTTTCAGACCGGCTTaa                                                                                        <  7:20303/149‑1 (MQ=255)                                                        gcCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCGATGCCCGCGAAGCCTCCAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTT‑GCGTTTCAGACCgg                                                                                             <  1:332821/149‑1 (MQ=255)                                                        gcCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGC‑ATGCCCGCGAAG‑‑‑‑‑AGGGCGGTACAGGCTGATCAAGCGCCAgg                                                                                                                                        >  8:216072/1‑101 (MQ=255)                                                        gcCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGC‑ATGCCCGCGAAG‑‑‑‑‑AGGGCGGTACAGGCTGATCAAGCGCCAgg                                                                                                                                        <  7:216072/101‑1 (MQ=255)                                                         cccGCCCCCACTGGCGCCGCGCCGCACCTGCGGGCATTACCCACCGGGTGGGCGGGGGC‑AGGCCCGCGAAG‑‑‑‑‑AGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTT‑GCGTTTCAGACCGGCTTAAGc                                                                                      <  3:5771/149‑1 (MQ=255)                                                          ccGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGC‑ATGCCCGCGAAG‑‑‑‑‑AGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTT‑GCGTTTc                                                                                                    >  5:73387/1‑134 (MQ=255)                                                          ccGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGC‑ATGCCCGCGAAG‑‑‑‑‑AGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTT‑GCGTTTc                                                                                                    <  6:73387/134‑1 (MQ=255)                                                          ccGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGC‑ATGCCCGCGAAG‑‑‑‑‑AGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTT‑GCGTTTCAGACCGGCTTAAGCg                                                                                     <  6:143923/149‑1 (MQ=255)                                                              tCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGC‑ATGCCCGCGAAG‑‑‑‑‑AGGGCGGGACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTT‑GCGTTTCAGACCGGCTTAAGCGTAGt                                                                                 >  5:297401/1‑149 (MQ=255)                                                              gcccgctcccacaggttcggtaatgcccgcaggtgcggcgcgactcctgtgggagcgggcgcgcccgcgaagaggccggcactggctGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTT‑GCGTTTCAGACCGGCTTAAg                                                                                       >  7:138259‑M2/88‑149 (MQ=255)                                                                 cacaGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGC‑ATGCCCGCGAAG‑‑‑‑‑AGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTT‑GCGTTTCAGACCGGCTTAAGCgagcggc                                                                               >  1:351163/1‑142 (MQ=255)                                                                   caGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGC‑ATGCCCGCGAAG‑‑‑‑‑AGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTCGCGTTTCAGACCGGCTTAAGCGTAGT‑GCtt                                                                            <  1:244175/149‑1 (MQ=255)                                                                   caGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGC‑ATGCCCGCGAAG‑‑‑‑‑AGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTT‑GCGTTTCAGACCGGCTTAAGCGTAGT‑GCTTg                                                                           <  3:358148/149‑1 (MQ=255)                                                                    tcccacaggttcggtaatgcccgcaggtgcggcgcgactcctgtgggagcgggcgcgcccgcgaagaggccggcactggctGATCAAGCGCCAGGCACAAAAAACGCCCCGAGTGGCGTTTTT‑GCGTTTCAGCCAGGCTTAAGCGTAGt                                                                                 >  4:218899‑M2/82‑149 (MQ=255)                                                                    aGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGC‑ATGCCCGCGAAG‑‑‑‑‑AGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTT‑GCGTTTCAGACCGGCTTAAGCGTAGT‑GCTTgg                                                                          <  6:190795/149‑1 (MQ=255)                                                                      ccacaggttcggtaatgcccgcaggtgcggcgcgactcctgtgggagcgggcgcgcccgcgaagagggcggtacaggctGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTT‑GCGTTTCAGACCGGCTTAAGCGTAGT‑Gc                                                                              >  2:183623‑M2/80‑149 (MQ=255)                                                                        acaggttcggtaatgcccgcaggtgcggcgcgactcctgtgggagcgggcatgcccgcgaagagggcggtacaggctGATCAAGCGcc                                                                                                                                           >  3:91170‑M2/78‑88 (MQ=255)                                                                        acaggttcggtaatgcccgcaggtgcggcgcgactcctgtgggagcgggcatgcccgcgaagagggcggtacaggctGATCAAGCGcc                                                                                                                                           <  4:91170‑M2/11‑1 (MQ=255)                                                                           gcgcCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGC‑ATGCCCGCGAAG‑‑‑‑‑AGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTT‑GCGTTTCAGACCGGCTTAAGCGTAGT‑GCTTGGccgccg                                                                    <  7:296453/148‑1 (MQ=255)                                                                                 cACCTGCGGGCATTACCGAACCTGTGGGAGCGGGC‑ATGCCCGCGAAG‑‑‑‑‑AGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTT‑GCGTTTCAGACCGGCTTAAGCGTAGT‑GCTTGGCCGCCGGgctgct                                                             >  2:101306/1‑149 (MQ=255)                                                                                     tGCGGGCATTACCGAACCTGTGGGAGCGGGC‑ATGCCCGCGAAG‑‑‑‑‑AGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTT‑GCGTTTCAGACCGGCTTAAGCGTAGT‑GCTTGGCCGCCGGGCTGctctct                                                         >  5:403771/1‑149 (MQ=255)                                                                                               aCCGAACCTGTGGGAGCGGGC‑ATGCCCGCGAAG‑‑‑‑‑AGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTT‑GCGTTTCAGACCGGCTTAAGCGTAGT‑GCTTGGCCGCCGGGCTGCTCTCTGCCAGGTc                                                 >  1:368008/1‑147 (MQ=255)                                                                                                ccGAACCTGTGGGAGCGGGC‑ATGCCCGCGAAG‑‑‑‑‑AGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTT‑GCGTTTCAGACCGGCTTAAGCGTAGT‑GCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAg                                              >  4:388354/1‑149 (MQ=255)                                                                                                 cGAACCTGTGGGAGCGGGC‑ATGCCCGCGAAG‑‑‑‑‑AGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTT‑GCGTTTCAGACCGGCTTAAGCGTAGT‑GCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAg                                              <  2:368008/148‑1 (MQ=255)                                                                                                  gAACCTGTGGGAGCGGGC‑ATGCCCGCGAAG‑‑‑‑‑AGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTT‑GCGTTTCAGACCGGCTTAAGCGTAGT‑GCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAggg                                            <  4:7400/149‑1 (MQ=255)                                                                                                   ctccTGTGGGAGCGGGC‑GCGCCCGCGAAG‑‑‑‑‑AGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTT‑GCGTTTCAGACCGGCTTAAGCGTAGT‑GCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGc                                           <  1:183623/147‑1 (MQ=255)                                                                                                        gtgGGAGCGCGC‑ATGCCCGAGAAG‑‑‑‑‑AGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTT‑GCGTTTCAGACCGGCTTAAGCGTTGT‑GCTTGGCCGCCGTGCTGCTCGCTGGCAGGTACAGGGCcgcgg                                      >  4:239659/1‑148 (MQ=255)                                                                                                          gggAGCGGGC‑ATGCCCGCGAAG‑‑‑‑‑AGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTT‑GCGTTTCAGACCGGCTTAAGCGTAGT‑GCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGcgtcg                                    <  3:227228/149‑1 (MQ=255)                                                                                                               cGGGC‑ATGCCCGCGAAG‑‑‑‑‑AGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTT‑GCGTTTCAGACCGGCTTAAGCGTAGT‑GCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATc                               <  6:403771/149‑1 (MQ=255)                                                                                                                   c‑ATGCCCGCGAAG‑‑‑‑‑AGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTT‑GCGTTTCAGACCGGCTTAAGCGTAGTCACTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGc                            <  1:101306/149‑1 (MQ=255)                                                                                                                       gCCCGCGAAG‑‑‑‑‑AGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTT‑GCGTTTCAGACCGGCTTAAGCGTAGT‑GCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACt                         >  3:121302/1‑148 (MQ=255)                                                                                                                         ccGCGAAG‑‑‑‑‑AGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTT‑GCGTTTCAGACCGGCTTAAGCGTAGT‑GCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTGAt                      <  4:121302/149‑1 (MQ=255)                                                                                                                             gAAG‑‑‑‑‑AGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTT‑GCGTTTCAGACCGGCTTAAGCGTAGT‑GCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTGATCTtg                  <  3:388354/149‑1 (MQ=255)                                                                                                                             gAAG‑‑‑‑‑AGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTT‑GCGTTTCAGACCGGCTTAAGCGTAGT‑GCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTGATCTtg                  <  5:23951/149‑1 (MQ=255)                                                                                                                                         gCGGTACAGGCTGATCAAGCGCCAGGCACATAAAACGCCCCGAGGGGCGTTTTT‑GCGTTTCAGACCGGCTTAAGCGTAGT‑GCTTGGCCGCCGGGCTGCTCTCTGCCAGGTc                                                 >  1:32935/1‑111 (MQ=255)                                                                                                                                         gCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTT‑GCGTTTCAGACCGGCTTAAGCGTAGT‑GCTTGGCCGCCGGGCTGCTCTCTGCCAGGTc                                                 <  2:32935/111‑1 (MQ=255)                                                                                                                                         gCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTT‑GCGTTTCAGACCGGCTTAAGCGTAGT‑GCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTGATCTTGTGGTACa           <  3:268295/149‑1 (MQ=255)                                                                                                                                             tACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTT‑GCGTTTCAGACCGGCTTAAGCGTAGT‑GCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTGATCTTGTGGTACAgcgc       <  2:325912/149‑1 (MQ=255)                                                                                                                                               cAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTT‑GCGTTTCAGACCGGCTTAAGCGTAGT‑GCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTGATCTTGTGGTACAGCgca      <  5:88603/148‑1 (MQ=255)                                                                                                                                                 ggctGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTT‑GCGTTTCAGACCGGCTTAAGCGTAGT‑GCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTGATCTTGTGGTACAGCgcagca   >  3:117192‑M2/5‑149 (MQ=255)                                                                                                                                                  gctGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTT‑GCGTTTCAGACCGGCTTAAGCGTAGT‑GCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTGATCTTGTGGTACAGCGCAGCAt  <  4:117192‑M2/146‑1 (MQ=255)                                                                                                                                                  gctGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTT‑GCGTTTCAGACCGGCTTAAGCGTAGT‑GCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTGATCTTGTGGTACAGCGCAGCAt  >  4:248636‑M2/4‑149 (MQ=255)                                                                                                                                                  gctGATCAAGCGCCAGGCACAAAAAACGCCCCGACGGGCGTTTTT‑GCGTTTCAGACCGGCTTAAGCGTAGT‑GCTAGGCCGCCGCGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTGATCTTGTGGTACAGCGCAGCAt  >  5:409322‑M2/4‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                    TCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGC‑ATGCCCGCGAAG‑‑‑‑‑AGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTT‑GCGTTTCAGACCGGCTTAAGCGTAGT‑GCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTGATCTTGTGGTACAGCGCAGCAT  >  NC_002947/867880‑868167

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.