New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1799873	46 (0.720)	7 (0.130)	7/208	NT	13.0%	intergenic (+43/‑144)	rnhB/dnaEA	ribonuclease HII/DNA polymerase III subunit alpha
	?	NC_002947	= 1799915	56 (1.070)					intergenic (+85/‑102)	rnhB/dnaEA	ribonuclease HII/DNA polymerase III subunit alpha

CTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTCCGAATTCTCGC  >  NC_002947/1799770‑1800062                                                                                                                                                  |                                                                                                                                                    cTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgag                                                                                                                                                  <  8:110085‑M2/149‑4 (MQ=255)      ccccGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgggc                                                                                                                                             >  8:179977‑M2/1‑141 (MQ=255)        ccGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgggcgt                                                                                                                                           >  7:362836‑M2/1‑139 (MQ=255)               gggcggCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgggcgtgcccgcg                                                                                                                                    >  1:53625‑M2/1‑132 (MQ=255)                 gcggcTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgggcgtgcccgcgaa                                                                                                                                  >  4:135064‑M2/1‑130 (MQ=255)                     cTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgggcgtgcccgcgaagggc                                                                                                                              <  5:73078‑M2/149‑24 (MQ=255)                         ggAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgggcgggcgtgcccgcgaagaaaaac                                                                                                                           <  1:349856‑M2/148‑27 (MQ=255)                                         gTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGTGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCcaaaa                                                                                                           >  8:47047/1‑148 (MQ=255)                                          tCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCGCGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGTCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCaaaaa                                                                                                           >  7:204734/1‑147 (MQ=255)                                          tCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCaaaaaaa                                                                                                         >  7:98136/1‑149 (MQ=255)                                          tCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCaaaaa                                                                                                           >  3:346571/1‑147 (MQ=255)                                             ccGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGcc                                                                                                      <  8:69077/149‑1 (MQ=255)                                              cGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgggcgtgtccgcgaa                                                                                                                                  <  4:373371‑M2/120‑20 (MQ=255)                                              cGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgggcgtgtccgcgaa                                                                                                                                  >  3:373371‑M2/1‑101 (MQ=255)                                                aTTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCt                                                                                                   <  7:244793/149‑1 (MQ=255)                                                    ccTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGc                                                                                                       <  2:33368/141‑1 (MQ=255)                                                    ccTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGt                                                                                                >  5:377321/1‑148 (MQ=255)                                                    ccTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGt                                                                                                >  4:235376/1‑148 (MQ=255)                                                    ccTGATCTGACCTATTGGGGCCGCTTCGCGCCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGc                                                                                                       >  1:33368/1‑141 (MQ=255)                                                        aTCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCCCGCCCGCTCTCACAGGATTCATCGGTCTGACCGGCGGGGCCGGACCTGTGGGAGCGGGCGATCCCGCGAAGGGCTGCAAAGCAACCCCAAAAAAAGCCCCTAGTTAggg                                                                                           >  8:321470/1‑148 (MQ=38)                                                             aCCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACaa                                                                                      >  7:296790/1‑149 (MQ=255)                                                                   tGGGGCCGGTGCGGGCCCGTTCGGGGGCCCGCCGGCTCTCACCGTTTTCTTCGTTCTGCGCGGGGGGGCCGTACCTGTGGGGGCGGGGGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCg                                                                                 <  2:349856/148‑1 (MQ=25)                                                                     gggCCGCTTGGCGGCCGTTCGCGGGAACGCCCGATCTCAAAGTATTCATCGGTTTTAGCGGGGGGGCGGTACCTGTGGGTGCGGGGGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGccc                                                                              <  4:346571/149‑1 (MQ=37)                                                                     gggCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgggcgtgcccgcgaagggctgcaaagcagccccaataggtcagatcagggaatcggtgacgccttcg                                                                              <  4:355117‑M2/149‑72 (MQ=255)                                                                     gggCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCATAACGGTGGGAGCGGGCGTGCCCGCGGAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCGAGTTAGGCGACACTCCCGccc                                                                              >  2:221992/1‑149 (MQ=38)                                                                       gCCGCTTCGCGGCCCTTTGCGGGCTCGCCCGGTCTCACAGTTTTCAGCGGTGTGTGCGGGGGGGCCGTACCTGTGGGAGCGTGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCGtt                                                                            <  8:98136/149‑1 (MQ=37)                                                                        ccGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTg                                                                           >  3:246542/1‑149 (MQ=255)                                                                         cGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGt                                                                          <  3:235376/149‑1 (MQ=255)                                                                          gCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTc                                                                         <  8:296790/149‑1 (MQ=255)                                                                          gCTGCGCGGCGGTTGGGGGGCGCGCCGGATCTCTCAGGATTCTTCGGTTTGAGGGGGGGGGTCTTACGTGTGGGAGGGGGGGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTc                                                                         <  8:204734/149‑1 (MQ=25)                                                                            ttCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGc                                                                                                       <  3:360131/117‑1 (MQ=255)                                                                            ttCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGc                                                                                                       >  4:360131/1‑117 (MQ=255)                                                                                         gcgGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGTGGCGGGGCCGTACGTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTa                                                           <  7:47047/148‑1 (MQ=255)                                                                                         gcgGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTAc                                                          <  3:342677/149‑1 (MQ=255)                                                                                               aCGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCACAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATc                                                    >  1:4044/1‑149 (MQ=255)                                                                                               aCGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTa                                                                                              <  7:207671/107‑1 (MQ=255)                                                                                               aCGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTa                                                                                              >  8:207671/1‑107 (MQ=255)                                                                                                 gCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACa                                                                                       >  2:186077/1‑112 (MQ=255)                                                                                                 gCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACa                                                                                       <  1:186077/112‑1 (MQ=255)                                                                                                   ccGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTc                                                 >  5:230247/1‑148 (MQ=255)                                                                                                     gCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgggcgtgcccgcgaagggccgcgaagcggccccaataggtcagatcagggaatcggtgacgccttcgcgcgcttcccaagccgcccgcaccggggcg                                                <  8:151757‑M2/147‑102 (MQ=255)                                                                                                         tcACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCg                                          >  2:406982/1‑149 (MQ=255)                                                                                                         tcACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCg                                          >  8:277207/1‑149 (MQ=255)                                                                                                          cacaGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgggcgtgcccgcgaagggccgcgaagcggccccaataggtcagatcagggaatcg                                                                                          <  5:206761‑M2/100‑60 (MQ=255)                                                                                                          cacaGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgggcgtgcccgcgaagggccgcgaagcggccccaataggtcagatcagggaatcg                                                                                          >  6:206761‑M2/1‑41 (MQ=255)                                                                                                           acaGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGTGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGt                                        >  2:269893/1‑149 (MQ=255)                                                                                                           acaGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGcc                                                                               <  5:64685/110‑1 (MQ=255)                                                                                                           acaGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGcc                                                                               >  6:64685/1‑110 (MQ=255)                                                                                                           acaGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCa                                                                 <  3:148868/124‑1 (MQ=255)                                                                                                           acaGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCa                                                                 >  4:148868/1‑124 (MQ=255)                                                                                                           acaGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGt                                        >  6:31390/1‑149 (MQ=255)                                                                                                             aGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGAt                                                     >  4:7558/1‑134 (MQ=255)                                                                                                             aGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGAt                                                     <  3:7558/134‑1 (MQ=255)                                                                                                                    aTCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGt                               >  3:51440/1‑149 (MQ=255)                                                                                                                       ggTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCTCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTc                                                 <  5:7988/128‑1 (MQ=255)                                                                                                                       ggTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAg                                                                   <  2:379333/110‑1 (MQ=255)                                                                                                                       ggTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAg                                                                   >  1:379333/1‑110 (MQ=255)                                                                                                                       ggTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTc                                                 >  6:7988/1‑128 (MQ=255)                                                                                                                          cTGCGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCt                         <  7:389191/149‑1 (MQ=255)                                                                                                                             aGCGGCGGGGCCGTACCTGTGGgagcgggcgtgcccgcgaagggccgcgaagcggccccaataggtcagatcagggaatcggtgacgccttcgcgcgcttcccaagccgcccgcaccggggcgaaggaacgccgatgaatgggcgtag                       >  7:151757‑M2/1‑22 (MQ=255)                                                                                                                             aGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCaaaaaaa                                                                                                         <  6:381761/66‑1 (MQ=255)                                                                                                                             aGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCaaaaaaa                                                                                                         >  5:381761/1‑66 (MQ=255)                                                                                                                              gcggcgGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTgcgc                     <  7:110085/149‑1 (MQ=255)                                                                                                                                 gcggGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTc                  >  2:41454/1‑149 (MQ=255)                                                                                                                                   ggggCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTcc                                                <  3:176529/117‑1 (MQ=255)                                                                                                                                   ggggCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTcc                                                >  4:176529/1‑117 (MQ=255)                                                                                                                                      gCCGTACCTGTGGgagcgggcgtgcccgcgaagggctgcgaagcggccccaataggtcagatcagggaatcggtgacgccttcgcgcgcttcccaagccgcccgcaccggggcgaaggaacgccgatgaatgggcgtaggcccaagacg             <  1:381810‑M2/149‑137 (MQ=255)                                                                                                                                      gCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTc             <  1:14525/149‑1 (MQ=255)                                                                                                                                       ccGTACCTGTGGgagcgggcgtgcccgcgaagggctgcaaagcagccccaataggtcagatcagggaatcggtgacgccttcgcgcgcttcccaagccgcccgcaccggggcgaaggaacgccgatgaatgggcgtaggcccaagacgt            >  3:355117‑M2/1‑12 (MQ=255)                                                                                                                                         gTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGcc                                                                               <  2:197109/80‑1 (MQ=255)                                                                                                                                         gTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGcc                                                                               >  1:197109/1‑80 (MQ=255)                                                                                                                                             cTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTCCGAATtc      <  1:269893/149‑1 (MQ=255)                                                                                                                                                tgGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTCCGAATtctc    <  4:246542/148‑1 (MQ=255)                                                                                                                                                tgGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTCCGAATTCTCg   <  6:377321/149‑1 (MQ=255)                                                                                                                                                 gggAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTgcgc                     >  3:202556/1‑130 (MQ=255)                                                                                                                                                 gggAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTgcgc                     <  4:202556/130‑1 (MQ=255)                                                                                                                                                  ggAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTCCGAATTCTCGc  <  1:41454/148‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                    CTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTCCGAATTCTCGC  >  NC_002947/1799770‑1800062

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.