| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 85,081 | T→G | 11.9% | intergenic (+59/+71) | aroE → / ← PP_0075 | shikimate 5‑dehydrogenase/choline sulfate transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 85,081 | 0 | T | G | 11.9% | 148.4 / 5.7 | 65 | intergenic (+59/+71) | aroE/PP_0075 | shikimate 5‑dehydrogenase/choline sulfate transporter |
| Reads supporting (aligned to +/- strand): ref base T (29/27); new base G (2/6); total (31/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.59e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCAGCTGAAGCCTTCTTTATCTGGCGTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑C‑GTCGTACGCCGATCCTCTGTGGGAGCGGCCTT‑GCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGCCTG > NC_002947/84933‑85224 | gcagCTGAAGCCTTCTTTATCTGGCGTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑c‑gt < 3:129905/149‑1 (MQ=255) cTGAAGCCTTCTTTATCTGGCGTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑C‑GTCGTa < 2:129857/149‑1 (MQ=255) gCCTTCTTTATCTGGCGTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑C‑GTCGTACGcc > 7:118724/1‑148 (MQ=255) ttcttTATCTGGCGTGGCGTGAGGACGGATACGGCGACGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑C‑GTCGTACGCCGATc > 5:88103/1‑149 (MQ=255) tcttTATCTGGCGTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCCTTCCCACAAAGTA‑C‑GTCGTACGCCGATcc > 3:275465/1‑149 (MQ=255) cttTATCTGTCCTGGCGTGAGGACGGATACGGCGCAGGTGTTGGCTTAACTGCGCCGGAAACTCGCTCTGTGATTAGCTGGACGGGGCCGCTTGGCTGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑C‑GTCGTACGCCGATc < 1:347342/147‑1 (MQ=37) ttATCTGGCGTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑C‑GTAGTACGCCGATCcact > 5:40492/1‑149 (MQ=255) tATCTGGCGTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑C‑GTCGTACGCCGATCctct < 8:118724/148‑1 (MQ=255) aTCTGGCGTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATAGCGACGCAAGGCCGTTCCCACAAAGTA‑C‑GTCGTACGCCGATCCTCtgt > 7:224894/1‑149 (MQ=255) tCTGGCGTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑C‑GTCGTACGCCGATCCTCtgt < 3:109705/148‑1 (MQ=255) tCTGGCGTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑C‑GTCGTACGCCGATCCTCtgt < 6:84710/148‑1 (MQ=255) cTGGCGTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTGCCACAAAGTA‑C‑GTCGTACGCCGCTCCACTGTgg > 1:180265/1‑149 (MQ=255) tggcgtggcgTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑C‑GTAGTACGCCGATACACTGTgg > 4:285166/1‑148 (MQ=255) cgtggcgtgAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑C‑GTCGTACGCCGATCCTCTGTGGGAGc < 7:159158/149‑1 (MQ=255) tggcgtgAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGCTCCCACAGAGGATC‑GGCGTACGACG‑TACTTTGTGGGAACgg < 6:331809/149‑1 (MQ=21) tggcgtgAGGCCGGATACGGCGCAGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCGTGGCGGCCCTATCGCGACGCAAGGCCGCTCCCACAGAGGATC‑GGCGTACGACG‑TACTTTGTGGGAACgg < 8:282473/149‑1 (MQ=21) ggcgtgAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑C‑GTCGTACGCCGATCCTCTGTGGGAGCGGc > 1:330804/1‑149 (MQ=255) ggcgtgAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTAGCGCGACGCAAGGCCGTTCCCACAAAGTA‑C‑GTCGTACGCCGATCCTCTGTGGGAGCGGc < 5:264148/149‑1 (MQ=255) gcgtgAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCATTCCGACAAAGTA‑C‑GTCGAACGCCGATCCTCGGTGGGAGCgg > 4:336079/1‑147 (MQ=255) gtgAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑C‑GTCGTACGCCGATCCTCtgt < 2:129907/137‑1 (MQ=255) gtgAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑C‑GTCGTACGCCGATCCTCtgt > 1:129907/1‑137 (MQ=255) gtgAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑C‑GTCGTACGCCGATCCTCTGTGGGAGc < 2:55197/143‑1 (MQ=255) gtgAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑C‑GTCGTACGCCGATCCTCTGTGGGAGc > 1:55197/1‑143 (MQ=255) gtgAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑C‑GTCGTACGCCGATCCTCTGTGGGAGCGGCCtt < 7:285670/149‑1 (MQ=255) gtgAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑C‑GTCGTACGCCGATCCTCTGTGGGAGCGGCCtt < 8:224894/149‑1 (MQ=255) gtgAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑C‑GGCGTACGCCGATCCTCTGTGGGAGCGGCCtt < 3:259710/149‑1 (MQ=255) gAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑C‑GTCGTACGCCCATCCTCTGTGCGAGCGGCCTA‑Gc > 7:85084/1‑149 (MQ=255) ggCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑c‑gtcg > 6:389440/1‑117 (MQ=255) ggCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑c‑gtcg < 5:389440/117‑1 (MQ=255) ggCGCCGGTGTTGGGTGAACTGCGCGGGCAACTGGGTGGGGGCTGAGCTGGCGGGGGCGGCTTGGGGGCCCTTTCGCGACGCAAGGCCGTTCCCACAAAGTA‑C‑GTGGTACGCCGATCCTCTGTGGGTGCGGCCTT‑GCGTCGCGATggg < 4:275465/148‑1 (MQ=37) ggCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCCTTAACACAAAATA‑A‑CGAGTACGCCGCAACACTGTGGGACCGGCCAT‑GCGTCGCGATTGGCTGCAAACCCGAc > 6:245530/1‑149 (MQ=255) gCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑C‑GTCGTACGCCGATCCTCTGTGGGAGCGGCCTT‑GCGTCGCGATGGGCTGCAAAGCAGAcc > 2:23535/1‑149 (MQ=255) cTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑C‑GTCGTACGCCGATCCTCTGTGGGAGc < 3:44414/115‑1 (MQ=255) cTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑C‑GTCGTACGCCGATCCTCTGTGGGAGc > 4:44414/1‑115 (MQ=255) ttaccTGGGCGGGAAACTCGCGGGGGGCTGCGGGGGCGGGGGCCGGTGGGGGGCCCTATCGCGACCAATGGCCGTTCCCAC‑AACTA‑CGGTCGTACGCCTTCCCTGTGTGGGCGGGGCGTT‑GGGTCGCGATGGGCTGCAAAGCAGACCCa < 2:180265/145‑1 (MQ=255) aaCTGCGCCGGCAACTCGCTGGGGGCCGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑C‑GTCGTACGCCGATCCTCTGTGGGAGCGGCCTT‑GCGTCGCGATGGGCTGCAAAg < 4:64161/139‑1 (MQ=255) aaCTGCGCCGGCAACTCGCTCGGGGCCGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑C‑GTCGTACGCCGATCCTCTGTGGGAGCGGCCTT‑GCGTCGCGATGGGCTGCAAAGCAgctggg > 3:64161/1‑142 (MQ=255) cgcCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑C‑GTCGTACGCCGATCCTCTGTGGGAGCGGCCTT‑GCGTCGCGATGGGCTGCAAAGCAGACCCAGAATc < 1:23535/147‑1 (MQ=255) cGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑C‑GTCTTACGCCGATCCTCTGTGGGAGCGGCCTT‑GCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAAc < 1:51444/149‑1 (MQ=255) aaCTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑C‑GTCGTACGCCTATCCTCTGTGGGAGCGGCCTT‑GCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCa < 3:285166/149‑1 (MQ=255) aaCTCGCGCGGGGCTGCGCGGGCCGGGGCCGCTTGGCGGCCCTAGCGCGACCCAAGGCCGTTCCCACAAAGTA‑C‑GGCGTACGCCTATCCTCTGTGGGAGCGGCCTT‑GCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCa < 1:155058/149‑1 (MQ=38) cgctggGGGCTGAGCTGGCCGGGGCGGCTTGGCGGCCATATCGGGACGCAAGGCCGTTCCCAAAAAGTA‑C‑GTCTTACGGCGATCCTGTGTGGGAGGGGCCTT‑GCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTc < 8:85084/148‑1 (MQ=38) gtcgGGGCTGCGGGGCCGGGGGCCGTTTGGGGGCCCTAGCGCGACCCATGGCCGTCCCCACAAAGTA‑C‑GGCGTCCGCCTATCCTCTGGGGGCGGGGCCTT‑GGGCCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTc < 6:40492/148‑1 (MQ=255) ctcgGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑C‑GTCGTACGCCGATCCTCTGTGGGAGCGGCCTT‑GCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTc < 3:281082/149‑1 (MQ=255) gggCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACTCAAGGCCGTTCCCACAAAGTA‑C‑GTCGTACGCCGATCCTCTGTGGTAGGGGCGTT‑GCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAAc < 6:88103/149‑1 (MQ=255) tGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑C‑GTCGTACGCCGATCCTCTGTGGGAGCGGCCTT‑GCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGa > 5:194854/1‑149 (MQ=255) gggctggctgGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑C‑GTCGTACGCCGATCCTCTGTGGGAGCGGCCTT‑GCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGAt > 6:301308/3‑149 (MQ=255) cTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑C‑GTCGTACGCCGATCCTCTGTGGGAGCGGCCTT‑GCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCgg > 1:76918/1‑149 (MQ=255) gcgggggCCGCTTGGCGGCCCTAGCGCCCCGCAAGGCCGTTCCCACAACTTA‑C‑GTCGTACGCCGATCCTCTGTGGCAGCGGCCTT‑GCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGca < 2:330804/146‑1 (MQ=38) cTTGGCGGCCCTATCGCGACGCAAGGCCATTCCCACAAAGTA‑C‑GTCGTACGCCGATCCTCTGTGGGAGCGGCCTT‑GCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCAcc < 3:336079/149‑1 (MQ=255) gcCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑C‑GTCGTACGCCGATCCTCTGTGGGAGCGGCCTT‑GCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCa < 2:76918/149‑1 (MQ=255) ccTATCGCGACGCAAGGCCGTTACCACAAAGTA‑C‑GTCGTACCCCGATACTCTGTGGGAGCGGCCTT‑GCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTGCTCAAACCCGATAGGGCACAACTCCAccccgtaccgc > 8:5431/1‑142 (MQ=38) aTCGCGGCGCAAGGCCGTTCCCACAAAGTA‑C‑GTCGTACGCCGATCCTCTGTGGGAGCGGCCTT‑GCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAAc > 1:224634/1‑131 (MQ=255) aTCGCGACGCAAGGCCGTTCCCACAAAGTA‑C‑GGCGTACGCCTATCCTCTGTGGGAGCGGCCTT‑GCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAAc < 2:224634/131‑1 (MQ=255) aTCGCGACGCAAGGCCGCTCCCACAGAGGATC‑GGCGTACGACG‑TACTTTGTGGGAGCGGCCTT‑GCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTc > 8:29258/1‑149 (MQ=21) tCGCGACGCAAGGCCGTTCCCACAAAGTA‑C‑GTCGTACGCCGATCCTCTGTGGGAGCGGCCTT‑GCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTc < 7:281902/148‑1 (MQ=255) tCGCGACGCAAGGCCGTTCCCACAAAGTA‑C‑GTCGTACGCCGATCCTCTGTGGGAGCGGCCTT‑GCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCt > 1:310656/1‑149 (MQ=255) gcgACGCAAGGCCGTTCCCACAAAGTA‑C‑GTCGTACGCCGATCCTCTGTGGGAGCGGCCTT‑GCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCggg > 8:121003/1‑122 (MQ=255) gcgACGCAAGGCCGTTCCCACAAAGTA‑C‑GTCGTACGCCGATCCTCTGTGGGAGCGGCCTT‑GCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTg < 6:194854/148‑1 (MQ=255) gcgACGCAAGGCCGTTCCCACAAAGTA‑C‑GCCGTACGCCGATCCTCTGTGGCAGCGGCCTT‑GCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTg < 5:245530/148‑1 (MQ=255) cAAGGCCGTTCCCACAAAGTA‑C‑GTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGGCGTCGCGATGGGCTGCAAAGCAGCCCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCCCCCCTTCCAGCTTCTGCAActc > 1:112470/1‑149 (MQ=255) aaGGCCGTTCACACAAAGTA‑C‑GTCGTACGCCGATCCTCTGTGGGAGCGGCCTT‑GCGTCGCGATGGGCTGCAAAGCAGACCCACAATCCCAACCTCATTCCTCAAACCGGATCGCGCACAACTCCACCCCTTCAAGCTTCTGCAActcct > 7:230042/1‑149 (MQ=255) gTTCCCACAAAGTA‑C‑GTCGTACGCCGATCCTCTGTGGGAGCGGCCTT‑GCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCa > 3:289569/1‑149 (MQ=255) ccACAAAGTA‑C‑GTCGTACGCCGATCCTCTGTGGGAGCGGCCTT‑GCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCg > 6:282553/1‑103 (MQ=255) cacaAAGTA‑C‑GTCGTACGCCGATCCTCTGTGGGAGCGGCCTT‑GCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGc > 3:407778/1‑149 (MQ=255) cacaAAGTA‑C‑GTCGTACGCCGATCCTCTGTGGGAGCGGCCTT‑GCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGc > 2:78209/1‑149 (MQ=255) cacaAAGTA‑C‑GTCGTACGCCGAGCCTCTGTGGGAGCGGCCTT‑GCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTGCACCCCTTCCAGCTTCTGCAACTCCTCGCTCACCTGc > 7:260958/1‑149 (MQ=255) gTA‑C‑GTCGTACGCCTTTCCTGTGTTGGAGCGGCCTT‑GCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGCCTg < 1:220480/149‑1 (MQ=255) tcgtACGCCGATCCTCTGTGGGAGCGGCCTT‑GCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGc > 1:305632/1‑120 (MQ=255) tcgtACGCCGATCCTCTGTGGGAGCGGCCTT‑GCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGc < 2:305632/120‑1 (MQ=255) | GCAGCTGAAGCCTTCTTTATCTGGCGTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑C‑GTCGTACGCCGATCCTCTGTGGGAGCGGCCTT‑GCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGCCTG > NC_002947/84933‑85224 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |