| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,344,305 | A→G | 7.4% | intergenic (+36/‑120) | PP_3817 → / → PP_3818 | polyamine ABC transporter ATP‑binding protein/phosphate‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,344,305 | 0 | A | G | 7.4% | 191.0 / 4.8 | 68 | intergenic (+36/‑120) | PP_3817/PP_3818 | polyamine ABC transporter ATP‑binding protein/phosphate‑binding protein |
| Reads supporting (aligned to +/- strand): ref base A (35/27); new base G (3/2); total (38/30) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.58e-01 | |||||||||||
ATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGG‑‑‑GCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTTGCTGCT > NC_002947/4344159‑4344450 | aTGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGG‑‑‑GCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCAcc < 5:2465/149‑1 (MQ=255) gCCGATGCAGCCGAGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGATAAAAGATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCAc > 1:136644/1‑149 (MQ=255) gCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGG‑‑‑GCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGc < 3:333145/149‑1 (MQ=255) gggCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGG‑‑‑GCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGcaca < 3:290799/149‑1 (MQ=255) ggCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGG‑‑‑GCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGcac < 4:382345/147‑1 (MQ=255) ggCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGG‑‑‑GCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGcac > 3:382345/1‑147 (MQ=255) cGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGG‑‑‑GCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGa < 1:220610/149‑1 (MQ=255) cGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGG‑‑‑GCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCAc > 8:178829/1‑125 (MQ=255) cGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGG‑‑‑GCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCAc < 7:178829/125‑1 (MQ=255) cGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGG‑‑‑GCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGgcg > 2:275440/1‑144 (MQ=255) cGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGG‑‑‑GCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGgcg < 1:275440/144‑1 (MQ=255) gTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGG‑‑‑GCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCa > 3:63760/1‑148 (MQ=255) gCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGG‑‑‑GCGCATTAAAAAAGTCTTGTACGTTGAGAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTa > 1:126506/1‑149 (MQ=255) gCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGG‑‑‑GCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGTGTGCCGCGCGGGCGGTGCTCGATCTgg < 4:300332/126‑1 (MQ=25) gCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGG‑‑‑GCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGTGTGCCGCGCGGGCGGTGCTCGATCTgg > 3:300332/1‑126 (MQ=25) aGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGG‑‑‑GCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCa > 4:147445/1‑126 (MQ=255) aGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGG‑‑‑GCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCa < 3:147445/126‑1 (MQ=255) aGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGG‑‑‑GCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTa > 8:202385/1‑149 (MQ=255) gCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGG‑‑‑GCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGcc > 3:374105/1‑149 (MQ=255) ttGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGG‑‑‑GCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑ATCCAGATAGAGCACCCCCCGCGCGGCCCACGATATGGCAGGCGCTGCACTATTTGa > 1:412031/1‑137 (MQ=255) gCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGG‑‑‑GCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCgg > 5:415603/1‑104 (MQ=255) gCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGG‑‑‑GCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCgg < 6:415603/104‑1 (MQ=255) tttATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGG‑‑‑GCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTcac < 7:202385/149‑1 (MQ=255) tataCCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGG‑‑‑GCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTcaca < 4:374105/148‑1 (MQ=255) ccGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGG‑‑‑GCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTatc < 3:147506/149‑1 (MQ=255) attggCCGAGAGCGACCTGAGCAGGTCGGCCGGG‑‑‑GCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGTAGGCGCTGCACTATTggt < 3:257334/119‑2 (MQ=255) aTGGGCCGAGAGCGACCTGAGCAGGTCGGCCGGG‑‑‑GCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGCCACACGATCTGGTAGACGCTGCACTATTGGa > 4:257334/1‑122 (MQ=255) ggCCGATAGCGACCTGAGCAAGTCGGCCGGG‑‑‑GCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGgcgc < 7:57650/107‑1 (MQ=255) agCGACCTGAGCAAGTCGGCCGGG‑‑‑GCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTc > 6:124847/1‑149 (MQ=255) ccTGAGCAAGTCGGCCGGG‑‑‑TCGCATA‑‑ACCGCTCTTTTACGTTC‑CAGCGCC‑TGCCAGATCGCCCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACACCCCGTCACATTATCATCACGCCACTGTCGTa < 4:63760/147‑1 (MQ=255) ccTGAGCAAGTCGGCCGGG‑‑‑GCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTaa > 4:293629/1‑148 (MQ=255) ccTGAGCAAGTCGGCCGGG‑‑‑GCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCAAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTaa > 7:356677/1‑148 (MQ=255) gAGCAAGTCGGCCGGG‑‑‑GCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCCATGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACAtt > 1:90157/1‑125 (MQ=255) gAGCAAGTCGGCCGGG‑‑‑GCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACAtt < 2:90157/124‑1 (MQ=255) cAAGTCGGCCGGG‑‑‑GCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑AGCCAGATCGACCACCGCCCGCGCGGCACACGAACTGGCAGGCGCAGCACTATTGGAGGCGTACGCCCCGTGACATTATCATCACGCCACAGTCGTAAACTTCCg > 3:75313/1‑149 (MQ=255) gTCGGCCGGG‑‑‑GCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGAAGGAGCACCCCCCGCGCGGCACACGCTCTGGCAGGCGCTGCACAATTGGCGGCGTACGCCCCGGCACATTTTCATCACCCCACAGTCCTAAACTTCCGGc > 1:359128/1‑148 (MQ=255) gCCGGG‑‑‑GCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAAct > 7:113289/1‑149 (MQ=255) cGGG‑‑‑GCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAActct < 2:126506/149‑1 (MQ=255) gcATT‑‑ACCGCTCTTGTACGTTG‑CAGCGCC‑AGCCAGATCGACCACCCCCCGCGCGGCACACGCACTTGCAGGCGCTGCATTAATGGCGGCGTACCCCCCGTCACATTATACTCCAGCCACAGTCGTAATCTGCCGGCCAACTCAATGccc > 6:235833/1‑148 (MQ=255) gcATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCAAGATCGAGCACGGCCCGCGGGGCAAACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCca < 2:359128/149‑1 (MQ=255) aTT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCca > 1:235091/1‑147 (MQ=255) aTT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCca > 2:94740/1‑147 (MQ=255) aaCGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGt > 3:64808/1‑149 (MQ=255) cGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGccc < 1:68792/90‑1 (MQ=255) cGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGccc > 2:68792/1‑90 (MQ=255) gCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGcc < 5:420425/125‑1 (MQ=255) gCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGcc > 6:420425/1‑125 (MQ=255) gCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACAAGATCTGGCAGGCGCTGCACTATTGGAGGCCTACGCCCCGTCACATTATCATCACCCCACTGTAGTAATCTGACGGCCAACTCTATTCCACAGGTCAc > 6:234977/1‑149 (MQ=255) tctTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTc > 7:37417/1‑145 (MQ=255) tctTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTc < 8:37417/145‑1 (MQ=255) gTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGc < 5:124847/148‑1 (MQ=255) gTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCt > 7:199024/1‑149 (MQ=255) g‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTcc < 8:113289/148‑1 (MQ=255) g‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCg > 5:414101/1‑149 (MQ=255) cAGCGCC‑GGCACGATCGCCCCCGGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCg < 6:234552/148‑1 (MQ=255) aGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGcc > 7:68969/1‑149 (MQ=255) aGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGGCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGcc > 7:168731/1‑149 (MQ=255) c‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCtt < 6:414101/149‑1 (MQ=255) tGCCAGATCGTGTGCCGCGCGGGCGGTGCTCGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTg > 5:138762/1‑149 (MQ=37) tGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTcaca < 7:134687/75‑1 (MQ=255) tGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTcaca > 8:134687/1‑75 (MQ=255) ccAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTc > 8:3212/1‑149 (MQ=255) cAGATCGTGTGCCGCGCGGGCGGTGCTCGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTa > 4:396210/1‑112 (MQ=25) cAGATCGTGTGCCGCGCGGGCGGTGCTCGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTa < 3:396210/112‑1 (MQ=25) aGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCtt < 8:68969/149‑1 (MQ=255) aTCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATg < 7:23628/111‑1 (MQ=255) aTCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATg > 8:23628/1‑111 (MQ=255) aGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTTgctgct > 4:144478/1‑149 (MQ=255) | ATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGG‑‑‑GCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTTGCTGCT > NC_002947/4344159‑4344450 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |