| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,344,310 | C→G | 7.8% | intergenic (+41/‑115) | PP_3817 → / → PP_3818 | polyamine ABC transporter ATP‑binding protein/phosphate‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,344,310 | 0 | C | G | 7.8% | 205.5 / 7.4 | 64 | intergenic (+41/‑115) | PP_3817/PP_3818 | polyamine ABC transporter ATP‑binding protein/phosphate‑binding protein |
| Reads supporting (aligned to +/- strand): ref base C (33/26); new base G (3/2); total (36/28) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.59e-01 | |||||||||||
GCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTTGCTGCTCACCCTGC > NC_002947/4344170‑4344458 | gCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGc < 3:333145/149‑1 (MQ=255) gggCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGcaca < 3:290799/149‑1 (MQ=255) ggCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGcac > 3:382345/1‑147 (MQ=255) ggCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGcac < 4:382345/147‑1 (MQ=255) cGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGa < 1:220610/149‑1 (MQ=255) cGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGgcg < 1:275440/144‑1 (MQ=255) cGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGgcg > 2:275440/1‑144 (MQ=255) gTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCa > 3:63760/1‑148 (MQ=255) gCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAAAAAAGTCTTGTACGTTGAGAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTa > 1:126506/1‑149 (MQ=255) gCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGTGTGCCGCGCGGGCGGTGCTCGATCTgg < 4:300332/126‑1 (MQ=25) gCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGTGTGCCGCGCGGGCGGTGCTCGATCTgg > 3:300332/1‑126 (MQ=25) aGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCa > 4:147445/1‑126 (MQ=255) aGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCa < 3:147445/126‑1 (MQ=255) aGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTa > 8:202385/1‑149 (MQ=255) gCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGcc > 3:374105/1‑149 (MQ=255) ttGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑ATCCAGATAGAGCACCCCCCGCGCGGCCCACGATATGGCAGGCGCTGCACTATTTGa > 1:412031/1‑137 (MQ=255) gCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCgg > 5:415603/1‑104 (MQ=255) gCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCgg < 6:415603/104‑1 (MQ=255) tttATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTcac < 7:202385/149‑1 (MQ=255) tataCCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTcaca < 4:374105/148‑1 (MQ=255) ccGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTatc < 3:147506/149‑1 (MQ=255) attggCCGAGAGCGACCTGAGCAGGTCGGCCGGGGCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGTAGGCGCTGCACTATTggt < 3:257334/119‑2 (MQ=255) aTGGGCCGAGAGCGACCTGAGCAGGTCGGCCGGGGCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGCCACACGATCTGGTAGACGCTGCACTATTGGa > 4:257334/1‑122 (MQ=255) ggCCGATAGCGACCTGAGCAAGTCGGCCGGGGCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGgcgc < 7:57650/107‑1 (MQ=255) agCGACCTGAGCAAGTCGGCCGGGGCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTc > 6:124847/1‑149 (MQ=255) ccTGAGCAAGTCGGCCGGGTCGCATA‑‑ACCGCTCTTTTACGTTC‑CAGCGCC‑TGCCAGATCGCCCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACACCCCGTCACATTATCATCACGCCACTGTCGTa < 4:63760/147‑1 (MQ=255) ccTGAGCAAGTCGGCCGGGGCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTaa > 4:293629/1‑148 (MQ=255) ccTGAGCAAGTCGGCCGGGGCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCAAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTaa > 7:356677/1‑148 (MQ=255) gAGCAAGTCGGCCGGGGCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCCATGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACAtt > 1:90157/1‑125 (MQ=255) gAGCAAGTCGGCCGGGGCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACAtt < 2:90157/124‑1 (MQ=255) cAAGTCGGCCGGGGCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑AGCCAGATCGACCACCGCCCGCGCGGCACACGAACTGGCAGGCGCAGCACTATTGGAGGCGTACGCCCCGTGACATTATCATCACGCCACAGTCGTAAACTTCCg > 3:75313/1‑149 (MQ=255) gTCGGCCGGGGCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGAAGGAGCACCCCCCGCGCGGCACACGCTCTGGCAGGCGCTGCACAATTGGCGGCGTACGCCCCGGCACATTTTCATCACCCCACAGTCCTAAACTTCCGGc > 1:359128/1‑148 (MQ=255) gCCGGGGCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAAct > 7:113289/1‑149 (MQ=255) cGGGGCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAActct < 2:126506/149‑1 (MQ=255) gcATT‑‑ACCGCTCTTGTACGTTG‑CAGCGCC‑AGCCAGATCGACCACCCCCCGCGCGGCACACGCACTTGCAGGCGCTGCATTAATGGCGGCGTACCCCCCGTCACATTATACTCCAGCCACAGTCGTAATCTGCCGGCCAACTCAATGccc > 6:235833/1‑148 (MQ=255) gcATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCAAGATCGAGCACGGCCCGCGGGGCAAACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCca < 2:359128/149‑1 (MQ=255) aTT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCca > 1:235091/1‑147 (MQ=255) aTT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCca > 2:94740/1‑147 (MQ=255) aaCGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGt > 3:64808/1‑149 (MQ=255) cGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGccc < 1:68792/90‑1 (MQ=255) cGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGccc > 2:68792/1‑90 (MQ=255) gCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGcc > 6:420425/1‑125 (MQ=255) gCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGcc < 5:420425/125‑1 (MQ=255) gCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACAAGATCTGGCAGGCGCTGCACTATTGGAGGCCTACGCCCCGTCACATTATCATCACCCCACTGTAGTAATCTGACGGCCAACTCTATTCCACAGGTCAc > 6:234977/1‑149 (MQ=255) tctTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTc < 8:37417/145‑1 (MQ=255) tctTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTc > 7:37417/1‑145 (MQ=255) gTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGc < 5:124847/148‑1 (MQ=255) gTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCt > 7:199024/1‑149 (MQ=255) g‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTcc < 8:113289/148‑1 (MQ=255) g‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCg > 5:414101/1‑149 (MQ=255) cAGCGCC‑GGCACGATCGCCCCCGGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCg < 6:234552/148‑1 (MQ=255) aGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGcc > 7:68969/1‑149 (MQ=255) aGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGGCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGcc > 7:168731/1‑149 (MQ=255) c‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCtt < 6:414101/149‑1 (MQ=255) tGCCAGATCGTGTGCCGCGCGGGCGGTGCTCGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTg > 5:138762/1‑149 (MQ=37) tGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTcaca < 7:134687/75‑1 (MQ=255) tGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTcaca > 8:134687/1‑75 (MQ=255) ccAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTc > 8:3212/1‑149 (MQ=255) cAGATCGTGTGCCGCGCGGGCGGTGCTCGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTa > 4:396210/1‑112 (MQ=25) cAGATCGTGTGCCGCGCGGGCGGTGCTCGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTa < 3:396210/112‑1 (MQ=25) aGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCtt < 8:68969/149‑1 (MQ=255) aTCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATg < 7:23628/111‑1 (MQ=255) aTCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATg > 8:23628/1‑111 (MQ=255) cgtgtgccgcgcggGCGGTGCTCGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTtgctg > 1:167545/7‑149 (MQ=38) gtgtgccgcgcggGCGGTGCTCGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTcc > 4:245982/6‑131 (MQ=38) gtgtgccgcgcggGCGGTGCTCGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTcc < 3:245982/126‑1 (MQ=38) aGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTTgctgct > 4:144478/1‑149 (MQ=255) cgcccgcGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAActct > 4:185901/1‑99 (MQ=255) cgcccgcGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAActct < 3:185901/99‑1 (MQ=255) cgcccgcGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTTGCTGCTCAccc > 8:127382/1‑149 (MQ=255) gcccccGCGGCACACGATATGTCTGGCGCTTCAATATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTTGCTGCTCACCCt < 5:235833/149‑1 (MQ=255) ccgcGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTTGCTGCTCACCCTGc < 2:136644/149‑1 (MQ=255) | GCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATT‑‑AACGCTCTTGTACGTTG‑CAGCGCC‑TGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTTGCTGCTCACCCTGC > NC_002947/4344170‑4344458 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |