Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 4,407,892 G→C 6.8% A131G (GCC→GGC)  PP_3890 ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029474,407,8920GC 6.8% 188.4 / 4.9 59A131G (GCC→GGC) PP_3890hypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (28/27);  new base C (2/2);  total (30/29)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.42e-01

GGCCGGGGTGACGCGGGTCACGCAGGTCGCGCACCGACTTGTCGGTCGCCTGACGCCGCACCTCGGCCTCGCTCAACTTCACTTCGCGGGTCGCGCTCATGCGGCCACCGTGGCGGGCAGGAGGAGGTAGGCACGGATGGCCTCGACGGCGTCGATGCTGCCCCGGCACACGATGGCCAGGTAATTCTCGTTCGTCAGCTGCTGCAGGTAGGCGTCCTGGCTGGGCGAGACCGGCGCGTCGAACGGCGGCTTGGCCTTGAACTCGATGTACAGGCCGAAGTACCCACCCCGCGC  >  NC_002947/4407744‑4408037
                                                                                                                                                    |                                                                                                                                                 
ggCCGGGGTGACGCGGGTCACGCAGGTCGCGCACCGACTTGTCGGTCGCCTGACGCCGCACCTCGGCCTCGCTCAACTTCACTTCGCGGGTCGCGGTCATGCGGCCACCGTGGCGGGCAGGAGGAGGTAGGCACGGATGGCCTCGACgg                                                                                                                                                   >  5:421995/1‑149 (MQ=255)
 gCCGGGGTGACGCGGGTCACGCAGGTCGCGCACCGACTTGTCGGTCGCCTGACGCCGCACCTCGGCCTCGCTCAACTTCACTTCGCGGGTCGCGCTCATGCGGCCACCGTGGCGGGCAGGAGGAGGTAGGCACGGATGGCCTCGACGGc                                                                                                                                                  <  8:51310/149‑1 (MQ=255)
   cGGGGTGACGCGGGTCACGCAGGTCGCGCACCGACTTGTCGGTCGCCTGACGCCGCACCTCGGCCTCGCTCAACTTCACTTCGCGGGTCGCGCTCATGCGGCCACCGTGGCGGGCAGGAGGAGGTAGGCACGGATGGCCTCGACGGCGt                                                                                                                                                <  4:65924/149‑1 (MQ=255)
          aCGCGGGTCACGCAGGTCGCGCACCGACTTGTCGGTCGCCTGACGCCGCACCTCGGCCTCGCTCAACTTCACTTCGCGGGTCGCGCTCATGCGGCCACCGTGGCGGGCAGGAGGAGGTAGGCACGGATGGCCTCGACGGCGTCGAtgct                                                                                                                                         <  6:421995/149‑1 (MQ=255)
              gggTCACGCAGGTCGCGCACCGACTTGTCGGTCGCCTGACGCCGCACCTCGGCCTCGCTCAACTTCACTTCGCGGGTCGCGCTCATGCGGCCACCGTGGCGGGCAGGAGGAGGTAGGCACGGATGGCCTCGACGGCGTCGATGCTGccc                                                                                                                                     <  3:108369/149‑1 (MQ=255)
                   aCGCAGGTCGCGCACCGACTTGTCGGTCGCCTGACGCCGCACCTCGGCCTCGCTCAACTTCACTTCGCGGGTCGCGCTCATGCGGCCACCGTGGCGGGCAGGAGGAGGTAGGCACGGATGGCCTCGACGGCGTCGATGCTGCCCCGGc                                                                                                                                 <  3:299029/148‑1 (MQ=255)
                    cGCAGGTCGCGCACCGACTTGTCGGTCGCCTGACGCCGCACCTCGGCCTCGCTCAACTTCACTTCGCGGGTCGCGCTCATGCGGCCACCGTGGCGGGCAGGAGGAGGTAGGCACGGATGGCCTCGACGGCGTCGATGCTGCCCCGGcac                                                                                                                               <  1:167258/149‑1 (MQ=255)
                     gCAGGTCGCGCACCGACTTGTCGGTCGCCTGACGCCGCACCTCGGCCTCGCTCAACTTCACTTCGCGGGTCGCGCTCATGCGGCCACCGTGGCGGGCAGGAGGAGGTAGGCACGGATGGCCTCGACGGCGTCGAt                                                                                                                                            <  1:164325/135‑1 (MQ=255)
                     gCAGGTCGCGCACCGACTTGTCGGTCGCCTGACGCCGCACCTCGGCCTCGCTCAACTTCACTTCGCGGGTCGCGCTCATGCGGCCACCGTGGCGGGCAGGAGGAGGTAGGCACGGATGGCCTCGACGGCGTCGATGCTGCCCCGGcaca                                                                                                                              >  5:288805/1‑149 (MQ=255)
                         gTCGCGCACCGACTTGTCGGTCGCCTGACGCCGCACCTCGGCCTCGCTCAACTTCACTTCGCGGGTCGCGCTCATGCGGCCACCGTGGCGGGCAGGAGGAGGTAGGCACGGATGGCCTCGACGGCGTCGATGCTGCCCCGGCACACGAt                                                                                                                          <  6:1841/149‑1 (MQ=255)
                           cgcgCACCGACTTGTCGGTCGCCTGACGCCGCACCTCGGCCTCGCTCAACTTCACTTCGCGGGTCGCGCTCATGCGGCCACCGTGGCGGGCAGGAGGAGGTAGGCACGGATGGCCTCGACGGCGTCGATGCTGCCCCGGCACACGATgg                                                                                                                        >  3:247063/1‑149 (MQ=255)
                           cgcgCACCGACTTGTCGGTCGCCGGACGCCGCACCTCGGCCTCGCTCAACTTCACTTCGCGGGTCGCGCTCATGCGGCCACCGTGGCGGGCAGGAGGAGGTAGGCACGGATGGCCTCGACGGCGTCGATGCTGCCCCGGCACACGATgg                                                                                                                        <  8:166782/149‑1 (MQ=255)
                            gcgcACCGACTTGTCGGTCGCCTGACGCCGCACCTCGGCCTCGCTCAACTTCACTTCGCGGGTCGCGCTCATGCGGCCACCGTGGCGGGCAGGAGGAGGTAGGCACGGATGGCCTCGACGGCGTCGATGCTGCCCCGGCACACGATGGc                                                                                                                       >  8:16226/1‑149 (MQ=255)
                            gcgcACCGACTTGTCGGTCGCCTGACGCCGCACCTCGGCCTCGCTCAACTTCACTTCGCGGGTCGCGCTCATGCGGCCACCGTGGCGGGCAGGAGGAGGTAGGCACGGATGGCCTCGACGGCGTCGATGCTGCCCCGGCACACGATGGc                                                                                                                       <  6:335034/149‑1 (MQ=255)
                            gcgcACCGACTTGTCGGTCGCCTGACGCCGCACCTCGGCCTCGCTCAACTTCACTTCGCGGGTCGCGCTCATGCCGCCACCGTGGCGGGCAGGAGGAGGTAGGCACGGATGGCCTCGACCGCGTCGATGCTGCCCCGGCACACGATGGc                                                                                                                       >  6:42515/1‑149 (MQ=255)
                              gcACCGACTTGTCGGTCGCCTGACGCCGCACCTCGGCCTCGCTCAACTTCACTTCGCGGGTCGCGCTCATGCGGCCACCGTGGCGGGCAGGAGGAGGTAGGCACGGATGGCCTCGACGGCGTCGATGCTGCCCCGGCACACGATGGCCa                                                                                                                     <  8:4812/149‑1 (MQ=255)
                                   gACTTGTCGGTCGCCTGACGCCGCACCTCGGCCTCGCTCAACTTCACTTCGCGGGTCGCGCTCATGCGGCCACCGTGGCGGGCAGGAGGAGGTAGGCACGGATGGCCTCGACGGCGTCGATGCTGCCCCGGCACACGATGGCCAGGTaa                                                                                                                <  2:293228/149‑1 (MQ=255)
                                      ttGTCGGTCGCCTGACGCCGCACCTCGGCCTCGCTCAACTTCACTTCGCGGGTCGCGCTCATGCGGCCACCGTGGCGGGCAGGAGGAGGTAGGCACGGATGGCCTCGACGGCGTCGATGCTGCCCCGGCACACGATGGCCAGGTAATtc                                                                                                             >  3:254896/1‑149 (MQ=255)
                                           ggtcgCCTGACGCCGCACCTCGGCCTCGCTCAACTTCACTTCGCGGGTCGCGCTCATGCGGCCACCGTGGCGGGCAGGAGGAGGTAGGCACGGATGGCCTCGACGGCGTCGATGCTGCCCCGGCACACGATGGCCAGGTAATTCtcgtt                                                                                                        <  4:254896/149‑1 (MQ=255)
                                               gCCTGACGCCGCACCTCGGCCTCGCTCAACTTCACTTCGCGGGTCGCGCTCATGCGGCCACCGTGGCGGGCAGGAGGAGGTAGGCACGGATGGCCTCGACGGCGTCGATGCTGCCCCGGCACACGATGGCCAGGTAATTCtcgttcgt                                                                                                     >  3:98432/1‑148 (MQ=255)
                                                ccTGACGCCGCACCTCGGCCTCGCTCAACTTCACTTCGCGGGTCGCGCTCATGCGGCCACCGTGGCGGGCAGGAGGAGGTAGGCACGGATGGCCTCGACGGCGTCGATGCTGCCCCGGCACACGATGGCCAGGTAATTCTCGTTCGTCa                                                                                                   <  2:43467/149‑1 (MQ=255)
                                                  tGACGCCGCACCTCGGCCTCGCTCAACTTCACTTCGCGGGTCGCGCTCATGCGGCCACCGTGGCGGGCAGGAGGAGGTAGGCACGGATGGCCTCGACGGCGTCGATGCTGCCCCGGCACACGATGGCCAGGGAATTCTCGTTCGTCAgc                                                                                                 >  4:28037/1‑149 (MQ=255)
                                                      gccgcACCTCGGCCTCGCTCAACTTCACTTCGCGGGTCGCGCTCATTCGCCCACCGTGGCGGGCAGGAGGAGGTAGGCACGGATGGCCTCGACGGCGTCGATGCTGCCCCGGCACACGATGGCCAGGTAATTCAAGTACGTCAgctgct                                                                                             >  3:208039/1‑149 (MQ=255)
                                                      gccgcACCTCGGCCTCGCTCAACTTCACTTCGCGGGTCGCGCTCATGCGGCCACCGTGGCGGGCAGGAGGAGGTAGGCACGGATGGCCTCGACGGCGTCGATGCTGCCCCGGCACACGATGGCCAGGTAATTCTCGTTCGTCAgctgct                                                                                             >  3:408474/1‑149 (MQ=255)
                                                       ccgcACCTCGGCCTCGCTCAACTTCACTTCGCGGGTCGCGCTCATGCGGCCACCGGGGCGGGCAGGAGGAGGTAGGCACGGATGGCCTCGACGGCGTCGATGCGGCCCCGGCACACGATGGCCAGGTAATTCTCGTTCGTCAGctgctg                                                                                            <  8:323262/149‑1 (MQ=255)
                                                                ggCCTCGCTCAACTTCACTTCGCGGGTCGCGCTCATGCGGCCACCGTGGCGGGCAGGAGGAGGTAGGCACGGATGGCCTCGACGGCGTCGATGCTGCCCCGGCACACGATGGCCAGGTAATTCTCGTTCGTCAGCTGCTGCAGGTAg                                                                                     <  7:16226/147‑1 (MQ=255)
                                                                ggCCTCGCTCAACTTCACTTCGCGGGTCGCGCTCATGCGGCCACCGTGGCGGGCAGGAGGAGGTAGGCACGGATGGCCTCGACGGCGTCGATGCTGCCCCGGCACACGATGGCCAGGTAATTCTCGTTCGTCAGCTGCTGCAGGTAg                                                                                     <  4:98432/147‑1 (MQ=255)
                                                                  ccTCGCTCTACTTCACTTCGCGGGTCGCGCTCATGCGGCCACCGTGGCGGGCAGGAGGAGTTAGGCACGGATGGCCTCGACGGCGTCGATGCTGCCCCGGCACACGATGGCCAGGTAATTCTCGTTCGTCAGCTGCTGCAGGTAGGctt                                                                                 <  4:208039/149‑3 (MQ=255)
                                                                      gCTCAACTTCACTTCGCGGGTCGCGCTCATGCGGCCACCGTGGCGGGCAGGAGGAGGTAGGCACGGATGGCCTCGACGGCGTCGATGCTGCCCCGGCACACGATGGCCAGGTAATTCTCGTTCGTCAGCTGCTGCAGGTAGGCGTCctg                                                                             >  6:332287/1‑149 (MQ=255)
                                                                          aaCTTCACTTCGCGGGTCGCGCTCATGCGGCCACCGTGGCGGGCAGGAGGAGGTAGGCACGGATGGCCTCGACGGCGTCGATGCTGCCCCGGCACACGATGGCCAGGTAATTCTCGTTCGTCAGCTGCTGCAGGTAGGCGTCctggctg                                                                         <  4:247063/149‑1 (MQ=255)
                                                                          aaCTTCACTTCGCGGGTCGCGCTCATGCGGCCACCGTGGCGGGCAGGAGGAGGTAGGCACGGATGGCCTCGACGGCGTCGATGCTGCCCCGGCACACGATGGCCAGGTAATTCTCGTTCGTCAGCTGCTGCAGGTAGGCGTCctggc                                                                           <  5:332287/147‑1 (MQ=255)
                                                                               cacttcGCGGGTCGCGCTCATGCGGCCACCGTGGCGGGCAGGAGGAGGTAGGCACGGATGGCCTCGACGGCGTCGATGCTGCCCCGGCACACGATGGCCAGGTAATTCTCGTTCGTCAGCTGCTGCAGGTAGGCGTCCTGGCTGGGc                                                                      <  4:408474/147‑1 (MQ=255)
                                                                                 ctgcgcgGGTCGCGCGCATGCGGCCACCGTGGCGGGCAGGAGGAGGTAGGCACGGATGGCCTCGACGGCGTCGATGCTGCCCCGGCACACGATGGCCAGGTAATTCTCGTTCGTCAGCTGCTGCAGGTAGGCGTCCTGGCTGGGCgaga                                                                  <  6:288805/146‑1 (MQ=255)
                                                                                   tcGCGGGTCGCGCTCATGCGGCCACCGTGGCGGGCAGGAGGAGGTAGGCACGGATGGCCTCGACGGCGTCGATGCTGCCCCGGCACACGATGGCCAGGTAATTCTCGTTCGTCAGCTGCTGCAGGTAGGCGTCCTGGCTGGGCGAGAcc                                                                >  6:262509/1‑149 (MQ=255)
                                                                                       gggTCGCGCTCATGCGGCCACCGTGGCGGGCAGGAGGAGGTAGGCACGGATGGCCTCGACGGCGTCGATGCTGCCCCGGCACACGATGGCCAGGTAATTCTCGTTCGTCAGCTGCTGCAGGTAGGCGTCCTGGCTGGGCGAGACCGgcg                                                            >  6:189795/1‑149 (MQ=255)
                                                                                              gcTCATGCGGCCACCGTGGCGGGCAGGAGGAGGTAGGCACGGATGGCCTCGACGGCGTCGATGCTGCCCCGGCACACGATGGCCAGGTAATTCTCGTTCGTCAGCTGCTGCAGGTAGGCGTCCTGGCTGGGCGAGACCGGCGCGTCGaa                                                     >  3:359992/1‑149 (MQ=255)
                                                                                                tCATGCGGCCACCGTGGCGGGCAGGAGGAGGTAGGCACGGATGGCCTCGACGGCGTCGATGCTGCCCCGGCACACGATGGCCAGGTAATTCTCGTTCGTCAGCTGCTGCAGGTAGGCGTCCTGGCTGGGCGAGACCGGCGCGTCGAAcg                                                   >  8:232388/1‑149 (MQ=255)
                                                                                                  aTGCGGCCACCGTGGCGGGCAGGAGGAGGTAGGCACGGATGGCCTCGACGGCGTCGATGCTGCCCCGGCACACGATGGCCAGGTAATTCTCGTTCGTCAGCTGCTGCAGGTAGGCGTCCTGGCTGGGCGAGACCGGCGCGTCGAAcggc                                                 >  3:339699/1‑149 (MQ=255)
                                                                                                  aTGCGGCCACCGTGGCGGGCAGGAGGAGGTAGGCACGGATGGCCTCGACGGCGTCGATGCTGCCCCGGCACACGATGGCCAGGTAATTCTCGTTCGTCAGCTGCTGCAGGTAGGCGTCCTGGCTGGGCGAGACCGGCGCGTCGAAcggc                                                 >  4:37922/1‑149 (MQ=255)
                                                                                                      ggCCACCGTGGCGGGCAGGAGGAGGTAGGCACGGATGGCCTCGACGGCGTCGATGCTGCCCCGGCACACGATGGCCAGGTAATTCTCGTTCGTCAGCTGCTGCAGGTAGGCGTCCTGGCTGGGCGAGACCGGCGCGTCGAACGGCGGCt                                             >  2:356546/1‑149 (MQ=255)
                                                                                                        ccACCGTGGCGGGCAGGAGGAGGTAGGCACGGATGGCCTCGACGGCGTCGATGCTGCCCCGGCACACGATGGCCAGGTAATTCTCGTTCGTCAGCTGCTGCAGGTAGGCGTCCTGGCTGGGCGAGACCGGCGCGTCGAACGGCGGCTTg                                           <  5:42515/149‑1 (MQ=255)
                                                                                                         cACCGTGGCGGGCAGGAGGAGGTAGGCACGGATGGCCTCGACGGCGTCGATGCTGCCCCGGCACACGATGGCCAGGTAATTCTCGTTCGTCAGCTGCTGCAGGTAGGCGTCCTGGCTGGGCGAGACCGGCGCGTCGAACGGCGGCTTgg                                          >  2:24736/1‑149 (MQ=255)
                                                                                                                gCGGGCAGGAGGAGGTAGGCACGGATGGCCTCGACGGCGTCGATGCTGCCCCGGCACACGATGGCCAGGTAATTCTCGTTCGTCAGCTGCTGCAGGTAGGCGTCCTGGCTGGGCGAGACCGGCGCGTCGAACGGCGGCTTGGCCTTGa                                    >  4:284112/1‑148 (MQ=255)
                                                                                                                        gaggaggTAGGCACGGATGGCCTCGACGGCGTCGATGCTGCCCCGGCACACGATGGCCAGGTAATTCTCGTTCGTCAGCTGCTGCAGGTAGGCGTCCTGGCTGGGCGAGACCGGCGCGTCGAACGGCGGCTTGGCCTTGAACTCGa                              >  4:385600/1‑146 (MQ=255)
                                                                                                                        gaggaggTAGGCACGGATGGCCTCGACGGCGTCGATGCTGCCCCGGCACACGATGGCCAGGTAATTCTCGTTCGTCAGCTGCTGCAGGTAGGCGTCCTGGCTGGGCGAGACCGGCGCGTCGAACGGCGGCTTGGCCTTGAACTCGa                              <  3:385600/146‑1 (MQ=255)
                                                                                                                        gaggaggTAGGCACGGATGGCCTCGACGGCGTCGATGCTGCCCCGGCACACGATGGCCAGGTAATTCTCGTTCGTCAGCTGCTGCAGGTAGGCGTCCTGGCTGGGCGAGACCGGCGCGTCGAACGGCGGCTTGGCCTTGAACTCGATg                            >  1:50729/1‑148 (MQ=255)
                                                                                                                        gaggaggTAGGCACGGATGGCCTCGACGGCGTCGATGCTACCCCGGCACACGATGGCCAGGTAATTCTCGTTCGTCAGCTGCTGCAGGTAg                                                                                     <  6:265114/91‑1 (MQ=255)
                                                                                                                        gaggaggTAGGCACGGATGGCCTCGACGGCGTCGATGCTACCCCGGCACACGATGGCCAGGTAATTCTCGTTCGTCAGCTGCTGCAGGTAg                                                                                     >  5:265114/1‑91 (MQ=255)
                                                                                                                              gTAGGCACGGATGGCCTCGACGGCGTCGATGCTGCCCCGGCACACGATGGCCAGGTAATTCTCGTTCGTCAGCTGCTGCAGGTAGGCGTCCTGGCTGGGCGAGACCGGCGCGTCGAAcggcg                                                >  8:178102/1‑122 (MQ=255)
                                                                                                                                      ggATGGCCTCGACGGCGTCGATGCTGCCCCGGCACACGATGGCCAGGTAATTCTCGTTCGTCAgctg                                                                                               >  4:389409/1‑67 (MQ=255)
                                                                                                                                      ggATGGCCTCGACGGCGTCGATGCTGCCCCGGCACACGATGGCCAGGTAATTCTCGTTCGTCAgctg                                                                                               <  3:389409/67‑1 (MQ=255)
                                                                                                                                      ggATGGCCTCGACGGCGTCGATGCTGCCCCGGCACACGATGGCCAGGTAATTCTCGTTCGTCAGCTGCTGCAGGTAGGCGTCCTGGCTGGGCGAGACCGGCGCGTCGAAcggc                                                 >  7:206086/1‑113 (MQ=255)
                                                                                                                                      ggATGGCCTCGACGGCGTCGATGCTGCCCCGGCACACGATGGCCAGGTAATTCTCGTTCGTCAGCTGCTGCAGGTAGGCGTCCTGGCTGGGCGAGACCGGCGCGTCGAAcggc                                                 <  8:206086/113‑1 (MQ=255)
                                                                                                                                           gcatCGACGCCGTCGAGGCTGCCCCGGCACACGATGGCCAGGTAATTCTCGTTCGTCAGCTGCTGCAGGTAGGCGTCctggctg                                                                         <  4:183978/81‑1 (MQ=255)
                                                                                                                                           gcatCGACGCCGTCGAGGCTGCCCCGGCACACGATGGCCAGGTAATTCTCGTTCGTCAGCTGCTGCAGGTAGGCGTCctggctg                                                                         <  4:177560/81‑1 (MQ=255)
                                                                                                                                           gcatCGACGCCGTCGAGGCTGCCCCGGCACACGATGGCCAGGTAATTCTCGTTCGTCAGCTGCTGCAGGTAGGCGTCctggctg                                                                         >  3:183978/4‑84 (MQ=255)
                                                                                                                                           gcatCGACGCCGTCGAGGCTGCCCCGGCACACGATGGCCAGGTAATTCTCGTTCGTCAGCTGCTGCAGGTAGGCGTCctggctg                                                                         >  3:177560/4‑84 (MQ=255)
                                                                                                                                              tCGACGGCGTCGATGCTGCCCCGGCACACGATGGCCAGGTAATTCTCGTTCGTCAGCTGCTGCAGGTAGGCGTCCTGGCTGGGCGAGACCGGCGCGTCGAACGGCGGCTTGGCCTTGAACTCGATGTACAGGCCGAAGTACCCACCCcg     >  4:327361/1‑149 (MQ=255)
                                                                                                                                                gACTGCGTCGATGATGCCCCTGCACACGATGGCCAGGTAATTCTCGTTCGTCAGCTGCTGCAGGTAGGCGTCCTGGCTGGGCTAGACCTGCGCGTAGAACGGCGGCTTGTCCTTGAACTCGATGTACATGCCGAAGTACCCACCAcgcg   >  4:298827/1‑149 (MQ=255)
                                                                                                                                                  cGGCGTCGATGCTGCCCCGGCACACGATGGCCAGGTAATTCTCGTTCGTCAGCTGCTGCAGGTAGGCGTCCTGGCTGGGCGAGACCGGCGCGTCGAACGGCGGCTTGGCCTTGAACTCCATGTACAGGCCGAAGTACCCCCCCCgcgc  >  7:387405/1‑148 (MQ=255)
                                                                                                                                                   ggCGTCGATGCTGCCCCGGCACACGATGGCCAGGTAATTCTCGTTCGTCAGCTGCTGCAGGTAGGCGTCCTGGCTGGGCGAGACCGGCGCGTCGAACGGCGGCTTGGc                                         <  4:87541/108‑1 (MQ=255)
                                                                                                                                                   ggCGTCGATGCTGCCCCGGCACACGATGGCCAGGTAATTCTCGTTCGTCAGCTGCTGCAGGTAGGCGTCCTGGCTGGGCGAGACCGGCGCGTCGAACGGCGGCTTGGc                                         >  3:87541/1‑108 (MQ=255)
                                                                                                                                                    |                                                                                                                                                 
GGCCGGGGTGACGCGGGTCACGCAGGTCGCGCACCGACTTGTCGGTCGCCTGACGCCGCACCTCGGCCTCGCTCAACTTCACTTCGCGGGTCGCGCTCATGCGGCCACCGTGGCGGGCAGGAGGAGGTAGGCACGGATGGCCTCGACGGCGTCGATGCTGCCCCGGCACACGATGGCCAGGTAATTCTCGTTCGTCAGCTGCTGCAGGTAGGCGTCCTGGCTGGGCGAGACCGGCGCGTCGAACGGCGGCTTGGCCTTGAACTCGATGTACAGGCCGAAGTACCCACCCCGCGC  >  NC_002947/4407744‑4408037

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑