Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 4,497,853 T→C 6.0% K33E (AAG→GAG)  PP_5651 ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029474,497,8530TC 6.0% 198.5 / 2.4 67K33E (AAG→GAG) PP_5651hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (33/30);  new base C (2/2);  total (35/32)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.27e-01

CCACGCCAGGAAGACTTAAGTAGTTCAACGAACGCTTCTGCTTCGCCAACTCCAAGTTGTTAATAATACCTTTGATCAGCACTCCCCACTGCTGATCTCGAATCCACTGCTTCCGGGGTTTGTGCCATGGAGCAAAGTCGACCTTCAGCATAGGAGCAGTGTGAACGGTAACTTTAGGTGCGGCACCCTTTAGGAAGGTGGAATCCGAGGCAAACGGGTCATTCTCGTCTTTGACGTCCATATCGTTCACTTTCGAATCTCCAGAACCATCACTTCCAGAATGGCTGAAAT  >  NC_002947/4497709‑4497999
                                                                                                                                                |                                                                                                                                                   
ccACGCCAGGAAGACTTAAGTAGTTCAACGAACGCTTCTGCTTCGCCAACTCCAAGTTGTTAATAATACCTTTGATCAGCACTCCCCACTGCTGATCTCGAATCCACTGCTTCCGGGGTTTGTGCCATGGAGCAAAGTCGACCTTCAg                                                                                                                                                  >  1:209261/1‑148 (MQ=255)
  aCGCCAGGAAGACTTAAGTAGTTCAACGAACGCTTATGCTTCGCCAACTCCAAGTTGTTAATAATACCTTTGATCAGCACTCCCCACTGCTGATCTCGAATCCACTGCTTCCGGGGTTTGTGCCATGGAGCAAAGTCGACCTTCAGCAt                                                                                                                                               <  8:221168/149‑1 (MQ=255)
        ggAAGACTTAAGTAGTTCAACGAACGCTTCTGCTTCGCCAACTCCAAGTTGTTAATAATACCTTTGATCAGCACTCCCCACTGCTGATCTCGAATCCACTGCTTCCGGGGTTTGTGCCATGGAGCAAAGTCGACCTTCAGCATAgg                                                                                                                                            <  4:186484/146‑1 (MQ=255)
        ggAAGACTTAAGTAGTTCAACGAACGCTTCTGCTTCGCCAACTCCAAGTTGTTAATAATACCTTTGATCAGCACTCCCCACTGCTGATCTCGAATCCACTGCTTCCGGGGTTTGTGCCATGGAGCAAAGTCGACCTTCAGCATAgg                                                                                                                                            >  3:186484/1‑146 (MQ=255)
           aGACTTAAGTAGTTCAACGAACGCTTCTGCTTCGCCAACTCCAAGTTGTTAATAATACCTTTGATCAGCACTCCCCACTGCTGATCTCGAATCCACTGCTTCCGGGGTTTGTGCCATGGAGCAAAGTCGACCTTCAGCATAGGAGCAgt                                                                                                                                      <  8:377547/149‑1 (MQ=255)
               ttAAGTAGTTCAACGAACGCTTCTGCTTCGCCAACTCCAAGTTGTTAATAATACCTTTGATCAGCACTCCCCACTGCTGATCTCGAATCCACTGCTTCCGGGGTTTGTGCCATGGAGCAAAGTCGACCTTCAGCTTTGGAGCAGtgtg                                                                                                                                   >  1:345819/1‑148 (MQ=255)
               ttAAGTAGTTCAACGAACGCTTCTGCTTCGCCAACTCCAAGTTGTTAATAATACCTTTGATCAGCACTCCCCACTGCTGATCTCGAATCCACTGCTTCCGGGGTTTGTGCCATGGAGCAAAGTCGACCTTCAGCATAGGAGCAGtgtg                                                                                                                                   >  7:204962/1‑148 (MQ=255)
                 aaGTAGTTCAACGAACGCTTCTGCTTCGCCAACTCCAAGTTGTTAATAATACCTTTGATCAGCACTCCCCACTGCTGATCTCGAATCCACTGCTTCCGGGGTTTGTGCCATGGAGCAAAGTCGACCTTCAGCATAGGAGCAGTGTGaa                                                                                                                                 <  2:345819/148‑1 (MQ=255)
                      gtTCAACGAACGCTTCTGCTTCGCCAACTCCAAGTTGTTAATAATACCTTTGATCAGCACTCCCCACTGCTGATCTCGAATCCACTGCTTCCGGGGTTTGTGCCATGGAGCAAAGTCGACCTTCAGCATAGGAGCAGTGTGAACGGTa                                                                                                                            <  8:233808/148‑1 (MQ=255)
                       ttCAACGAACGCTTCTGCTTCGCCAACTCCAAGTTGTTAATAATACCTTTGATCAGCACTCCCCACTGCTGATCTCGAATCCACTGCTTCCGGGGTTTGTGCCATGGAGCAAAGTCGACCTCCAGCATAGGAGCAGTGTGAACGGTAAc                                                                                                                          >  1:198121/1‑149 (MQ=255)
                             gaacgCTTCTGCTTCGCCAACTCCAAGTTGTTAATAATACCTTTGATCAGCACTCCCCACTGCTGATCTCGAATCCACTGCTTCCGGGGTTTGTGCCATGGAGCAAAGTCGACCTTc                                                                                                                                                    >  6:92383/1‑117 (MQ=255)
                             gaacgCTTCTGATTCGCCAACACCAAGTTGTTAATAAAACCTTTGAAAAGCACTCCCCACTGCTCATCTCGAATCCACTGCTTCCGCGGTTTGTGCCATGGATCAAAGACGACATTCAGCAAAGGAGCACTGACAACGGAAAATTTAgg                                                                                                                   >  4:98954/1‑149 (MQ=255)
                              aacgCTTCTGCTTCGCCAACTCCAAGTTGTTAATAATACCTTTGATCAGCACTCCCCACTGCTGATCTCGAATCCACTGCTTCCGGGGTTTGTGCCATGGAGCAAAGTCGACCTCCAGCATAGGAGCAGTGTGAACGGTAACTTTAGGt                                                                                                                  <  2:198121/149‑1 (MQ=255)
                                            gCCAACTCCAAGTTGTTAATAATACCTTTGATCAGCACTCCCCACTGCTGATCTCGAATCCACTGCTTCCGGGGTTTGTGCCATGGAGCAAAGTCGACCTTCAGCATAGGAGCAGTGTGAACGGTAACTTTAGGTGCGGCACCCTTTa                                                                                                     <  3:98954/148‑1 (MQ=255)
                                                    cAAGTTGTTAATAATACCTTTGATCAGCACTCCCCACTGCTGATCTCGAATCCACTGCTTCCGGGGTTTGTGCCATGGAGCAAAGTCGACCTTCAGCATAGGAGc                                                                                                                                         >  2:328724/1‑105 (MQ=255)
                                                    cAAGTTGTTAATAATACCTTTGATCAGCACTCCCCACTGCTGATCTCGAATCCACTGCTTCCGGGGTTTGTGCCATGGAGCAAAGTCGACCTTCAGCATAGGAGc                                                                                                                                         <  1:328724/105‑1 (MQ=255)
                                                    cAAGTTGTTAATAATACCTTTGATCAGCACTCCCCACTGCTGATCTCGAATCCACTGCTTCCGGGGTTTGTGCCATGGAGCAAAGTCGACCTTCAGCATAGGAGCAGTGTGAACGGTAACTTTAGGTGCGGCACCCTTTAGGAAGGTg                                                                                             <  8:336253/148‑1 (MQ=255)
                                                        ttgttAATAATACCTTTGATCAGCACTCCCCACTGCTGATCCCGAATCCACTGCTTCCGGGGTTTGTGCCATGGAGCAAAGTCGACCTTCAGCATAGGAGCAGTGTGAACGGTAACTTTAGGTGCGGCACCCTTTAGGAAGGTGGAATc                                                                                        >  4:376293/1‑149 (MQ=255)
                                                          gttAATAATACCTTTGATCAGCACTCCCCACTGCTGATCTCGAATCCACTGCTTCCGGGGTTTGTGCCATGGAGCAAAGTCGACCTTCAGCATAGGa                                                                                                                                           >  4:185044/1‑97 (MQ=255)
                                                          gttAATAATACCTTTGATCAGCACTCCCCACTGCTGATCTCGAATCCACTGCTTCCGGGGTTTGTGCCATGGAGCAAAGTCGACCTTCAGCATAGGa                                                                                                                                           <  3:185044/97‑1 (MQ=255)
                                                           ttAATAATACCTTTGATCAGCACTCCCCACTGCTGATCTCGAATCCACTGCTTCCGGGGTTTGTGCCATGGAGCAAAGTCGACCTTCAGCATAGGAGCAGTGTGAACGGTAACTTTAGGTGCGGCACCCTTTAGGAAGGTGGAATCCGa                                                                                     <  2:209261/149‑1 (MQ=255)
                                                             aataatACCTTTGATCAGCACTCCCCACTGCTGATCTCGAATCCACTGCTTCCGGGGTTTGTGCCATGGAGCAAAGTCGACCTTCAGCATAGGAGCAGTGTGAACGGTAACTTTAGGTGCGGCACCCTTTAGGAAGGTGGAATCCGAgg                                                                                   >  1:329862/1‑149 (MQ=255)
                                                             aataatACCTTTGATCAGCACTCCCCACTGCTGATCTCGAATCCACTGCTTCCGGGGTTTGTGCCATGGAGCAAAGTCGACCTTCAGCATAGGAGCAGTGTGAACGGTAACTTTAGGTGCGGCACCCTTTAGGAAGGTGGAATCCGAg                                                                                    <  8:204962/148‑1 (MQ=255)
                                                              ataataCCTTTGATCAGCACTCCCCACTGCTGATCTCGAATCCACTGCTTCCGGGGTTTGTGCCATGGAGCAAAGTCGACCTTCAGCATAGGAGCAGTGTGAACGGTAACTTTAGGTGCGGCACCCTTTAGGAAGGTGGAATCCGAgg                                                                                   >  6:12267/1‑148 (MQ=255)
                                                              ataataCCTTTGATCAGCACTCCCCACTGCTGATCCCGAATCCACTGCTTCCGGGGTTTGTGCCATGGAGCAAAGTCGACCTTCAGCATAGGAGCAGTGTGAACGGTAACTTTAGGTGCGGCACCCTTTAGGAAGGTGGAATCCGAgg                                                                                   <  3:376293/148‑1 (MQ=255)
                                                                     cTTTGATCAGCACTCCCCACTGCTGATCTCGAATCCACTGCTTCCGGGGTTTGTGCCATGGAGCAAAGTCGACCTTCAGCATAGGAGCAGTGTGAACGGTAACTTTAGGTGCGGCACCCtt                                                                                                       <  6:146714/121‑1 (MQ=255)
                                                                     cTTTGATCAGCACTCCCCACTGCTGATCTCGAATCCACTGCTTCCGGGGTTTGTGCCATGGAGCAAAGTCGACCTTCAGCATAGGAGCAGTGTGAACGGTAACTTTAGGTGCGGCACCCtt                                                                                                       >  5:146714/1‑121 (MQ=255)
                                                                      tttGATCAGCACTCCCCACTGCTGATCTCGAATCCACTGCTTCCGGGGTTTGTGCCATGGAGCAAAGTCGACCTTCAGCATAGGAGCAGTGTGAACGGTAACTTTAGGTGCGGCTCGCTTTAGGATGGGGGCTTCGGAGGAAAACGGGt                                                                          >  6:290438/1‑149 (MQ=255)
                                                                               cACTCCCCACTGCTGATCTCGAATCCACTGCTTCCGGGGTTTGTGCCATGGAGCAAAGTCGACCTTCAGCATAGGAGCAGTGTGAACGGTAACTTTAGGTGCGGCACCCTTTAGGAAGGTGGAATCCGAGGCAAACGGGTCATTCTCGt                                                                 <  6:409183/149‑1 (MQ=255)
                                                                                 cTCCCCACTGCTGATCTCGAATCCACTGCTTCCGGGGTTTGTGCCATGGAGCAAAGTCGACCTTCAGCATAGGAGCAGTGTGAACGGTAACTTTAGGTGCGGCACCCTTTAGGAAGGTg                                                                                             >  6:400702/1‑119 (MQ=255)
                                                                                 cTCCCCACTGCTGATCTCGAATCCACTGCTTCCGGGGTTTGTGCCATGGAGCAAAGTCGACCTTCAGCATAGGAGCAGTGTGAACGGTAACTTTAGGTGCGGCACCCTTTAGGAAGGTg                                                                                             <  5:400702/119‑1 (MQ=255)
                                                                                    cccACTGCTGATCTCGAATCCACTGCTTCCGGGGTTTGTGCCATGGAGCAAAGTCGACCTTCAGCATAGGAGCAGTGTGAACGGTAACTTTAGGTGCGGCACCCttt                                                                                                      <  6:311600/107‑1 (MQ=255)
                                                                                    cccACTGCTGATCTCGAATCCACTGCTTCCGGGGTTTGTGCCATGGAGCAAAGTCGACCTTCAGCATAGGAGCAGTGTGAACGGTAACTTTAGGTGCGGCACCCttt                                                                                                      >  5:311600/1‑107 (MQ=255)
                                                                                    cccACTGCTGATCTCGAATCCACTGCTTCCGGGGTTTGTGCCATGGAGCAAAGTCGACCTTCAGCATAGGAGCAGTGTGAACGGTAACTTTAGGTGCGGCACCCTTTAGGAAGGTGGAATCCGAGGCAAACGGGTCATtctc                                                                   >  2:253544/1‑142 (MQ=255)
                                                                                    cccACTGCTGATCTCGAATCCACTGCTTCCGGGGTTTGTGCCATGGAGCAAAGTCGACCTTCAGCATAGGAGCAGTGTGAACGGTAACTTTAGGTGCGGCACCCTTTAGGAAGGTGGAATCCGAGGCAAACGGGTCATtctc                                                                   <  1:253544/142‑1 (MQ=255)
                                                                                            tgATCTCGAATCCACTGCTTCCGGGGTTTGTGCCATGGAGCAAAGTCGACCTTCAGCATAGGAGCAGTATGAACGGTAACTTTAGGTGCGGCACCCTTTAGGAAGGTGGAATCCGAGGCAAACGGGTCATTCTCGTCTTTGACGTCCa                                                     >  2:189442/1‑148 (MQ=255)
                                                                                                   gAATCCACTGCTTCCGGGGTTTGTGCCATGGAGCAAAGTCGACCTTCAGCATAGGAGCAGTGTGAACGGTAACTTTAGGTGCGGCACCCTTTa                                                                                                     >  4:57078/1‑93 (MQ=255)
                                                                                                   gAATCCACTGCTTCCGGGGTTTGTGCCATGGAGCAAAGTCGACCTTCAGCATAGGAGCAGTGTGAACGGTAACTTTAGGTGCGGCACCCTTTa                                                                                                     <  3:57078/93‑1 (MQ=255)
                                                                                                   gAATCCACTGCTTCCGGGGTTTGTGCCATGGAGCAAAGTCGACCTTCAGCATAGGAGCAGTGTGAACGGTAACTTTAGGTGCGGCACCCTTTAGGAAGGTGGAATCCGAGGCAAACGGGTCATTCTCGTCTTTGACGTCCATATCGtt                                              >  4:62307/1‑148 (MQ=255)
                                                                                                   gAATCCACTGCTTCCGGGGTTTGTGCCATGGAGCAAAGTCGACCTTCAGCATAGGAGCAGTGTGAACGGTAACTTTAGGTGCGGCACCCTTTAGGAAGGTGGAATCCGAGGCAAACGGGTCATTCTCGTCTTTGACGTCCATATCGtt                                              >  5:179642/1‑148 (MQ=255)
                                                                                                   gAATCCACTGCTTCCGGGGTTTGTGCCATGGAGCAAAGTCGACCTCCAGCATAGGAGCAGTGTGAACGGTAACTTTAGGTGCGGCACCCTTTAGGAAGGTGGAATCCGAGGCAAACGGGTCATTCTCGTCTTTGACGTCCATATCGtt                                              <  8:126487/148‑1 (MQ=255)
                                                                                                   gAATCCACTGCTTCCGGGGTTTGTGCCATGGAGCAAAGTCGACCTCCAGCATAGGAGCAGTGTGAACGGTAACTTTAGGTGCGGCACCCTTTAGGAAGGTGGAATCCGAGGCAAACGGGTCATTCTCGTCTTTGACGTCCATATCGtt                                              >  7:126487/1‑148 (MQ=255)
                                                                                                    aaTCCACTGCTTCCGGGGTGTGTGCCATGCAGCAAAGTCGCCCTTCAGCATAGGAGCAGTGTGAACGGTAACTTTAGGTGCGGCACCCTTTAGGAAGGTGGAATCCGAGGCAAACGGGTCATTCTCGTCTTTGACGTCCATATCGTTCa                                            <  7:312955/149‑1 (MQ=255)
                                                                                                           tGCTTCCGGGGTTTGTGCCATGGAGCAAAGTCGACCTTCAGCATAGGAGCAGTGTGAACGGTAACTTTAGGTGCGGCACCCTTTAGGAAGGTGGAATCCGAGGCAAACGGGTCATTCTCGTCTTTGACGTCCATATCGTTCACTTTCg                                      >  5:122380/1‑148 (MQ=255)
                                                                                                              ttCCGGGGTTTGTGCCATGGAGCAAAGTCGACCTTCAGCATAGGAGCAGTGTGAACGGTAACTTTAGGTGCGGCACCCTTTAGGAAGGTGGAATCCGa                                                                                     <  5:337103/98‑1 (MQ=255)
                                                                                                              ttCCGGGGTTTGTGCCATGGAGCAAAGTCGACCTTCAGCATAGGAGCAGTGTGAACGGTAACTTTAGGTGCGGCACCCTTTAGGAAGGTGGAATCCGa                                                                                     >  6:337103/1‑98 (MQ=255)
                                                                                                                 ctgggTTTGTGCCATGGAGCAAAGTCGACCTTCAGCATAGGAGCAGTGTGAACGGTAACTTTAGGTGCGGCACCCTTTAGGAAGGTGGAATCCGAGGCAAACGGGTCATTCTCGTCTTTGACGTCCATATCGTTCACTTTCGAATCTcc                               <  6:179642/147‑1 (MQ=255)
                                                                                                                     gTTTGTGCCATGGAGGAAAGTCGACCTTCAGCATTGGAGCAGTGTGAACTGTAACTTTAGGTGCGGCACCCTTTAGGTAGGTg                                                                                             <  7:3131/83‑1 (MQ=255)
                                                                                                                     gTTTGTGCCATGGAGCAAAGTCGACCTTCAGCATACGAGCAGTGTGAACGGTAACTTTAGGTGCGGCACCCTTTAGGAAGGTg                                                                                             >  8:3131/1‑83 (MQ=255)
                                                                                                                         gtgCCATGGAGCAAAGTCGACCTTCATCATAGGAGCAGTGTGAACGGTAACTTTAGGTGCGGCACCCTTTAGGAAGGTGGAATCCGAGGCAAACGGGTCATTCTCGTCTTTGACGTCCATATCGTTCACTTTc                                       <  8:215162/133‑1 (MQ=255)
                                                                                                                         gtgCCATGGAGCAAAGTCGACCTTCAGCATAGGAGCAGTGTGAACGGTAACTTTAGGTGCGGCACCCTTTAGGAAGGTGGAATCCGAGGCAAACGGGTCATTCTCGTCTTTGACGTCCATATCGTTCACTTTc                                       >  7:221107/1‑133 (MQ=255)
                                                                                                                         gtgCCATGGAGCAAAGTCGACCTTCAGCATAGGAGCAGTGTGAACGGTAACTTTAGGTGCGGCACCCTTTAGGAAGGTGGAATCCGAGGCAAACGGGTCATTCTCGTCTTTGACGTCCATATCGTTCACTTTc                                       <  8:221107/133‑1 (MQ=255)
                                                                                                                          tgCCATGGAGCAAAGTCGACCTTCAGCATAGGAGCAGTGTGAACGGTAACTTTAGGTGCGGCACCCTTTAGGAAGGTGGAATCCGAGGCAAACGGGTCATTCTCGTCTTTGACGTCCATATCGTTCACTTTCGAATCTCCAGAACCAt                       <  2:329862/148‑1 (MQ=255)
                                                                                                                           gCCATGGAGCAAAGTCGACCTTCAGCATAGGAGCAGTGTGAACGGTAACTTTAGGTGCGGCACCCTTTAGGAAGGTGGAATCCGAg                                                                                    >  3:259667/1‑86 (MQ=255)
                                                                                                                           gCCATGGAGCAAAGTCGACCTTCAGCATAGGAGCAGTGTGAACGGTAACTTTAGGTGCGGCACCCTTTAGGAAGGTGGAATCCGAg                                                                                    <  4:259667/86‑1 (MQ=255)
                                                                                                                            ccATGGAGCAAAGTCGACCTTCAGCATAGGAGCAGTGTGAACGGTAACTTTAGGTGCGGCACCCTTTAGGAAGGTGGAATCCGAGGCAAACGGGTCATTCTCGTCTTTGACGTCCATATCGTTCACTTTCGAATCTCCAGAACCATCAc                    >  3:169477/1‑149 (MQ=255)
                                                                                                                              aTGGAGCAAAGTCGACCTTCAGCATAGGAGCAGTGTGAACGGTAACTTTAGGTGCGGCACCCTTTAGGAAGGTGGAATCCGAGGCAAACGGGTCATTCTCGTCTTTGACGTCCATATCGTTCACTTTCGAATCTCCAGAACCATCACtt                  >  4:113333/1‑149 (MQ=255)
                                                                                                                              aTGGAGCAAAGTCGACCTTCAGCATAGGAGCAGTGTGAACGGTAACTTTAGGTGCGGCACCCTTTAGGAAGGTGGAATCCGAGGCAAACGGGTCATTCTCGTCTTTGACGTCCATATCGTTCACTTTCGAATCTCCAGAACCATCACtt                  >  1:270983/1‑149 (MQ=255)
                                                                                                                                 gAGCAAAGTCGACCTTCAGCATAGGAGCAGTGTGAACGGTAACTTTAGGTGCGGCACCCTTTAGGAAGGTGGAATCCGAGGCAAACGGGTCATTCTCGTCTTTGACGTCCATATCGTTCACTTTCGAATCTCCAGAACCATCACTTCCa               <  3:113333/149‑1 (MQ=255)
                                                                                                                                  aGCAAAGTCGACCTTCAGCATAGGAGCAGTGTGAACGGTAACTTTAGGTGCGGCACCCTTTAGGAAGGTGGAATCCGAGGCAAACGGGTCATTCTCGTCTTTGACGTCCATATCGTTCACTTTCGAATCTCCAGAACCATCACTTc                 >  3:250266/1‑146 (MQ=255)
                                                                                                                                       aGTCGACCTTCAGCATAGGAGCAGTGTGAACGGTAACTTTAGGTGCGGCACCCTTTAGGAAGGTGGAATCCGAGGCAAACGGGTCATTCTCGTCTTTGACGTCCATATCGTTCACTTTCGAATCTCCAGAAcc                         <  1:64342/133‑1 (MQ=255)
                                                                                                                                       aGTCGACCTTCAGCATAGGAGCAGTGTGAACGGTAACTTTAGGTGCGGCACCCTTTAGGAAGGTGGAATCCGAGGCAAACGGGTCATTCTCGTCTTTGACGTCCATATCGTTCACTTTCGAATCTCCAGAAcc                         >  2:64342/1‑133 (MQ=255)
                                                                                                                                         tCGACCTTCAGCATAGGAGCAGTGTGAACGGTAACTTTAGGTGCGGCACCCTTTAGGAAGGTGGAATCCGAGGCAAACGGGTCATTCTCGTCTTTGACGTCCATATCGTTc                                             >  6:93411/1‑111 (MQ=255)
                                                                                                                                         tCGACCTTCAGCATAGGAGCAGTGTGAACGGTAACTTTAGGTGCGGCACCCTTTAGGAAGGTGGAATCCGAGGCAAACGGGTCATTCTCGTCTTTGACGTCCATATCGTTc                                             <  5:93411/111‑1 (MQ=255)
                                                                                                                                         tCGACCTTCAGCATAGGAGCAGTGTGAACGGTAACTTTAGGTGCGGCACCCTTTAGGAAGGTGGAATCCGAGGCAAACGGGTCATTCTCGTCTTTGACGTCCATATCGTTCACTTTCGAAtctc                                <  4:250828/124‑1 (MQ=255)
                                                                                                                                         tCGACCTTCAGCATAGGAGCAGTGTGAACGGTAACTTTAGGTGCGGCACCCTTTAGGAAGGTGGAATCCGAGGCAAACGGGTCATTCTCGTCTTTGACGTCCATATCGTTCACTTTCGAAtctc                                >  3:250828/1‑124 (MQ=255)
                                                                                                                                            aCCTTCAGCATAGGAGCAGTGTGAACGGTAACTTTTAGGTGCGGCACCCTTTAGGAAGGTGGAATCCGAGGCAATCGGGTCATTCTCGTCTTTGACGTCCATATCGTTCACTTTCGAATCTCCAGAACCATCACTTCCAGAATGGCTg      >  1:48053/1‑148 (MQ=255)
                                                                                                                                               ttCAGCATAGGAGCAGTGTGAACGGTAACTTTAGGTGCGGCACCCTTTAGGAAGGTGGAATCCGAGGCAAACGGGTCATTCTCGTCTTTGACGTCCATATCGTTCACTTTCGAATCTCCAGAACCATCACTTCCAGAATGGCTGAAAt  >  2:348253/1‑148 (MQ=255)
                                                                                                                                                |                                                                                                                                                   
CCACGCCAGGAAGACTTAAGTAGTTCAACGAACGCTTCTGCTTCGCCAACTCCAAGTTGTTAATAATACCTTTGATCAGCACTCCCCACTGCTGATCTCGAATCCACTGCTTCCGGGGTTTGTGCCATGGAGCAAAGTCGACCTTCAGCATAGGAGCAGTGTGAACGGTAACTTTAGGTGCGGCACCCTTTAGGAAGGTGGAATCCGAGGCAAACGGGTCATTCTCGTCTTTGACGTCCATATCGTTCACTTTCGAATCTCCAGAACCATCACTTCCAGAATGGCTGAAAT  >  NC_002947/4497709‑4497999

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: