| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,697,324 | T→A | 5.6% | intergenic (+45/+17) | PP_4156 → / ← kdpE | LysR family transcriptional regulator/two‑component system DNA‑binding response regulator KdpE |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,697,324 | 0 | T | A | 5.6% | 214.9 / 2.6 | 71 | intergenic (+45/+17) | PP_4156/kdpE | LysR family transcriptional regulator/two‑component system DNA‑binding response regulator KdpE |
| Reads supporting (aligned to +/- strand): ref base T (32/35); new base A (2/2); total (34/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.53e-01 | |||||||||||
GGGTAGACATCATCTGGATCAAGTCGCGCCCGTTGGGCCTGGGCGCGCGACGCTACCTGGAAGTCATGCGCCAGCTGTTCGAGAAGGAGCCCCCCAGGGCCTGATATCCCTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCTTTGGGCTGTGTGCGGGTTATGCTGTCGGCGCCACCAACCTGTAGCCAACCCCCGCCTCG‑GTAATGATGAACCGCGGCGCCGTGGGGTCATCGCCCAGCTTCTGTCGCAGATGCCCGACCACGATGCGCAGGTAGTGGGTATCCTCCG > NC_002947/4697176‑4697471 | gggTAGACATCATCTGGATCAAGTCGCGCCCGTTGGGCCTGGGCGCGCGACGCTACCTGGAAGTCATGCGCCAGCTGTTCGAGAAGGAGCCCCCCAGGGCCTGATATCCCTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCt > 3:302056/1‑149 (MQ=255) gACATCATCTGGATCAAGTCGCGCCCGTTGGGCCTGGGCGCGCGACGCTACCTGGAAGTCATGCGCCAGCTGTTCGAGAAGGAGCCCCCCAGGGCCTGATATCCCTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCTTTggg < 1:303983/149‑1 (MQ=255) atcatcATGATCAAGTCGCGCCCGTTGGGCCTGGGCGCGCGACGCTACCTGGAAGTCATGCGACAGATGTTCGAGAAGGAGCCCCCCACGGACTGATATCCCTAGCACGCGTCCAGGCCCAGCAGGAGTTCGCCCAGCCCTTTGCGCtg > 6:409181/1‑149 (MQ=255) tcatcTGGATCAAGTCGCGCCCGTTGGGCCTGGGCGCGCGACGCTACCTGGAAGTCATGCGCCAGCTGTTCGAGAAGGAGCCCCCCAGGGCCTGATATCCCTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCTTTg < 8:277343/143‑1 (MQ=255) tcatcTGGATCAAGTCGCGCCCGTTGGGCCTGGGCGCGCGACGCTACCTGGAAGTCATGCGCCAGCTGTTCGAGAAGGAGCCCCCCAGGGCCTGATATCCCTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCTTTg > 7:277343/1‑143 (MQ=255) atcTGGATCAAGTCGCGCCCGTTGGGCCTGGGCGCGCGACGCTACCTGGAAGTCATGCGCCAGCTGTTCGAGAAGGAGCCCCCCAGGGCCTGATATCCCTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCTTTGGGCtgtgt < 2:139868/149‑1 (MQ=255) gATCAAGTCGCGCCCGTTGGGCCTGGGCGCGCGACGCTACCTGGAAGTCATGCGCCAGCTGTTCGAGAAGGAGCCCCCCAGGGCCTGATATCCCTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCttt < 8:254945/135‑1 (MQ=255) gATCAAGTCGCGCCCGTTGGGCCTGGGCGCGCGACGCTACCTGGAAGTCATGCGCCAGCTGTTCGAGAAGGAGCCCCCCAGGGCCTGATATCCCTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCttt > 7:254945/1‑135 (MQ=255) gATCAAGTCGCGCCCGTTGGGCCTGGGCGCGCGACGCTACCTGGAAGTCATGCGCCAGCTGTTCGAGAAGGAGCCCCCCAGGGCCTGATATCCCTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCTTTGGGCTGTGTGCggg < 3:390255/149‑1 (MQ=255) gATCAAGTCGCGCCCGTTGGGCCTGGGCGCGCGACGCTACCTGGAAGTCATGCGCCAGCTGTTCGAGAAGGAGCCCCCCAGGGCCTGATATCCCTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCTTTGGGCTGTGTGCggg < 7:361837/149‑1 (MQ=255) gATCAAGTCGCGCCCGTTGGGCCTGGGCGCGCGACGCTACCTGGAAGTCATGCGCCAGCTGTTCGAGAAGGAGCCCCCCAGGGCCTGATATCCCTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCTTTGGGCTGTGTGCggg > 7:237151/1‑149 (MQ=255) aTCAAGTCGCGCCCGTTGGGCCTGGGCGCGCGACGCTACCTGGAAGTCATGCGCCAGCTGTTCGAGAAGGAGCCCCCCAGGGCCTGATATCCCTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCTTTGGGCTGTGTGCGGGt > 7:30081/1‑149 (MQ=255) tCAAGTCGCGCCCGTTGGGCCTGGGCGCGCGACGCTACCTGGAAGTCATGCGCCAGCTGTTCGAGAAGGAGCCCCCCAGGGCCTGATATCCCTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCACAGCCCAAAGGGCtgg > 5:418808/1‑139 (MQ=255) tCAAGTCGCGCCCGTTGGGCCTGGGCGCGCGACGCTACCTGGAAGTCATGCGCCAGCTGTTCGAGAAGGAGCCCCCCAGGGCCTGATATCCCTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCACAGCCCAAAGGGCtgg < 6:418808/140‑2 (MQ=255) aaGTCGCGCCCGTTGGGCCTGGGCGCGCGACGCTACCTGGAAGTCATGCGCCAGCTGTTCGAGAAGGAGCCCCCCAGGGCCTGATATCCCTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCTTTGGGCTGTGTGCGGGTTa < 6:226014/148‑1 (MQ=255) tCGCGCCCGTTGGGCCTGGGCGCGCGACGCTACCTGGAAGTCATGCGCCAGCTGTTCGAGAAGGAGCCCCCCAGGGCCTGATATCCCTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCTTTGGGCTGTGTGCGGGTTATGCt < 5:37577/149‑1 (MQ=255) tCGCGCCCGTTGGGCCTGGGCGCGCGACGCTACCTGGAAGTCATGCGCCAGCTGTTCGAGAAGGAGCCCCCCAGGGCCTGATATCCCTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCAAAGGGCtggg > 3:263265/1‑134 (MQ=255) tCGCGCCCGTTGGGCCTGGGCGCGCGACGCTACCTGGAAGTCATGCGCCAGCTGTTCGAGAAGGAGCCCCCCAGGGCCTGATATCCCTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCAAAGGGCtggg < 4:263265/136‑3 (MQ=255) gcCCGTTGGGCCTGGGCGCGCGACGCTACCTGGAAGTCATGCGCCAGCTGTTCGAGAAGGAGCCCCCCAGGGCCTGATATCCCTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCTTTGGGCTGTGTGCGGGTTATGCTGTCg < 5:179381/149‑1 (MQ=255) cccGTTGGGCCTGGGCGCGCGACGCTACCTGGAAGTCATGCGCCAGCTGTTCGAGAAGGAGCCCCCCAGGGCCTGATATCCCTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCTTTGGGCTGTGTGCGGGTTATGCTGTCgg < 4:302056/149‑1 (MQ=255) gggCCTGGGCGCGCGACGCTACCTGGAAGTCATGCGCCAGCTGTTCGAGAAGGAGCCCCCCAGGGCCTGATATCCCTAGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCTTTGGGCTGTGTGCGGGTTATGCTGTCGGCGccac > 1:129889/1‑149 (MQ=255) ccTGGGCGCGCGACGCTACCTGGAAGTCATGCGCCAGCTGTTCGAGAAGGAGCCCCCCAGGGCCTGATATCCCTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCTTTGGGCTGTGTGCGGGTTATGCTGTCGGCGCCACCaa > 8:385279/1‑149 (MQ=255) ccTGGGCGCGCGACGCTACCTGGAAGTCATGCGCCAGCTGTTCGAGAAGGAGCCCCCCAGGGCCTGATATCCCTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCTTTGGGCTGTGTGCGGGTTATGCTGTCGGCGCCACCaa > 8:340695/1‑149 (MQ=255) cTGGGCGCGCGACGCTACCTGGAAGTCATGCGCCAGCTGTTCGAGAAGGAGCCCCCCAGGGCCTGATATCCCTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCTTTGGGCTGTGTGCGGGTTATGCTGTCGGCGCCACCAAc < 5:409181/149‑1 (MQ=255) tGGGCGCGCGACGCTACCTGGAAGTCATGCGCCAGCTGTTCGAGAAGGAGCCCCCCAGGGCCTGATATCCCTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCTTTGGGCTGTGTGCGGGTTATGCTGTCGGCGCCACCAAcc > 4:339635/1‑149 (MQ=255) gcgcgACGCTACCTGGAAGTCATGCGCCAGCTGTTCGAGAAGGAGCCCCCCAGGGCCTGATATCCCTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCTTTGGGCTGTGTGCGGGTTATGCTGTCGGCGCCACCAACCTGTAg < 5:330911/149‑1 (MQ=255) gcgcgACGCTACCTGGAAGTCATGCGCCAGCTGTTCGAGAAGGAGCCCCCCAGGGCCTGATATCCCTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCTTTGGGCTGTGTGCGGGTTATGCTGTCGGCGCCACCAACCTGTAg < 4:164176/149‑1 (MQ=255) cgcgACGCTACCTGGAAGTCATGCGCCAGCTGTTCGAGAAGGAGCCCCCCAGGGCCTGATATCCCTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCTTTGGGCTGTGTGCGGGTTATGCTGTCGGCGCCACCAACCTGTAGc < 8:30081/149‑1 (MQ=255) ccTGGAAGTCATGCGCCAGCTGTTCGAGAAGGAGCCCCCCAGGGCCTGATATCCCTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCTTTGGGCTGTGTGCGGGTTATGCTGTCGGCGCCACCAACCTGTAGCCAACCCCCGc > 1:199981/1‑149 (MQ=255) tGGAAGTCATGCGCCAGCTGTTCGAGAAGGAGCCCCCCAGGGCCTGATATCCCTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCTTTGGGCTGTGTGCGGGTTATGCTGTCGGCGCCACCAACCt < 2:364949/132‑1 (MQ=255) tGGAAGTCATGCGCCAGCTGTTCGAGAAGGAGCCCCCCAGGGCCTGATATCCCTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCTTTGGGCTGTGTGCGGGTTATGCTGTCGGCGCCACCAACCt > 1:364949/1‑132 (MQ=255) aGTCATGCGCCAGCTGTTCGAGAAGGAGCCCCCCAGGGCCTGATATCCCTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCTTTGGGCTGTGTGCGGGTTATGCTGTCGGCGCCACCAACCTGTAGCCAACCCCCGCCTCG‑Gt < 7:340695/149‑1 (MQ=255) gTCATGCGCCAGCTGTTCGAGAAGGAGCCCCCCAGGGCCTGATATCCCTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCTTTGGGCTGTGTGCGGGTTATGCTGTCGGCGCCACCAACCTGTAGCCAACCCCCGCCTCG‑GTa < 6:261402/149‑1 (MQ=255) aTGCGCCAGCTGTTCGAGAAGGAGCCCCCCAGGGCCTGATATCCCTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCTTTGGGCTGTGTGCGGGTTATGCTGTCGGCGCCACCAACCTGTAGCCAACCCCCGCCTCG‑GTAat > 5:133626/1‑148 (MQ=255) ccAGCTGTTCGAGAAGGAGCCCCCCAGGGCCTGATATCCCTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCTTTGGGCTGTGTGCGGGTTATGCTGTCGgcgc > 8:378633/1‑110 (MQ=255) ccAGCTGTTCGAGAAGGAGCCCCCCAGGGCCTGATATCCCTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCTTTGGGCTGTGTGCGGGTTATGCTGTCGgcgc < 7:378633/110‑1 (MQ=255) ccAGCTGTTCGAGAAGGAGCCCCCCAGGGCCTGATATCCCTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCTTTGGGCTGTGTGCGGGTTATGCTGTCGGCGCCACCAACCTGTAGCCAACCCCCGCCTCG‑GTAATGATGaa < 8:237151/149‑1 (MQ=255) ttCGAGAAGGAGCCCCCCAGGGCCTGATATCCCTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCTTTGGGCTGTGTGCGGGTTATGCTGTCGGCGCCACCAACCTGTAGCCAAccccc > 7:309529/1‑125 (MQ=255) ttCGAGAAGGAGCCCCCCAGGGCCTGATATCCCTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCTTTGGGCTGTGTGCGGGTTATGCTGTCGGCGCCACCAACCTGTAGCCAAccccc < 8:309529/125‑1 (MQ=255) gagaAGGAGCCCCCCAGGGCCTGATATCCCTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCTTTGGGCTGTGTGCGGGTTATGCTGTCGGCGCCACCAACCTGTAGCCa < 3:327827/116‑1 (MQ=255) gagaAGGAGCCCCCCAGGGCCTGATATCCCTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCTTTGGGCTGTGTGCGGGTTATGCTGTCGGCGCCACCAACCTGTAGCCa > 4:327827/1‑116 (MQ=255) ggAGCCCCCCAGGGCCTGATATCCCTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCTTTGGGCTGTGTGCGGGTTATGCTGTCGGCGCCACCAACCTGTAGCCAACCCCCGCCTCG‑GTAATGATGAACCGCGGCGCCGTggg < 7:385279/149‑1 (MQ=255) gAGCCCCCCAGGGCCTGATATCCCTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCTTTGGGCTGTGTGCGGGTTACGCTGTCGGCGCCACCAACCTGTAGCCAACCCCCGCCTCG‑GTAATGATGAACCGCGGCGCCGTgggg > 2:351411/1‑149 (MQ=255) aGCCCCCCAGGGCCTGATATCCCTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCTTTGGGCTGTGTGCGGGTTATGCTGTCGGCGCCACCAACCTGTAGCCAACCCCCGCCTCG‑GTAATGATGAACCGCGGCGCCGTggg < 5:25616/147‑1 (MQ=255) aGCCCCCCAGGGCCTGATATCCCTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCTTTGGGCTGTGTGCGGGTTATGCTGTCGGCGCCACCAACCTGTAGCCAACCCCCGCCTCG‑GTAATGATGAACCGCGGCGCCGTggg > 6:25616/1‑147 (MQ=255) ccccccAGGGCCTGATATCCCTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCTTTGGGCTGTGTGCGGGTTATGCTGTCGGCGCCACCAACCTGTAGCCAACCCCCGCCTCG‑GTAATGATGAACCGCGGCGCCGTGGGGTCa > 4:373405/1‑149 (MQ=255) ccccccAGGGCCTGATATCCCTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCTTTGGGCTGTGTGCGGGTTATGCTGTCGGCGCCACCAACCTGTAGCCAACCCCCGCCTCG‑GTAATGATGAACCGCGGCGCCGTGGGGTCa > 7:268202/1‑149 (MQ=255) gCCTGATATCCCTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCTTTGGGCTGTGTGCGGGTTATGCTGTCGGCGCCACCAACCTGTAGCCAACCCCCGCCTCG‑GTAATGATGAACCGCGGCGCCGTGGGGTCATCGCCCAGc > 6:345429/1‑149 (MQ=255) cTGATATCCCTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCTTTGGGCTGTGTGCGGGTTATGCTGTCGGCGCCACCAACCTGTAGCCAACCCCCGCCTCg‑g > 6:235873/1‑109 (MQ=255) cTGATATCCCTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCTTTGGGCTGTGTGCGGGTTATGCTGTCGGCGCCACCAACCTGTAGCCAACCCCCGCCTCg‑g < 5:235873/109‑1 (MQ=255) tGATATCCCTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCTTTGGGCTGTGTGCGGGTTATGCTGTCGGCGCCACCAACCTGTAGCCAACCCCCGCCTCG‑GTAATGATGAACCGCGGCGCCGTGGGGTCATCGCCCa > 4:156670/1‑144 (MQ=255) tGATATCCCTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCTTTGGGCTGTGTGCGGGTTATGCTGTCGGCGCCACCAACCTGTAGCCAACCCCCGCCTCG‑GTAATGATGAACCGCGGCGCCGTGGGGTCATCGCCCa < 3:156670/144‑1 (MQ=255) atatCCCTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCTTTGGGCTGTGTGCGGGTTATGCTGTCGGCGCCACCAACCTGTAGCCAACCCCCGCCTCG‑GTAATGATGAACCGCGGCGCCGTGGGGTCATCGCCCAGCTTCt < 2:199981/148‑1 (MQ=255) atatCCCTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCTTTGGGCTGTGTGCGGGTTATGCTGTCGGCGCCACCAACCTGTAGCCAACCCCCGCCTCG‑GTAATGATGAACCGCGGCGCCGTGGGGTCATCGCCCAGCTTCTg > 5:220711/1‑149 (MQ=255) tatCCCTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCTTTGGGCTGTGTGCGGGTTATGCTGTCGGCGCCACCAACCTGTAGCCAACCCCCGCCTCG‑GTAATGATGAACCGCGGCGCCGTGGGGTCATCGCCCAGCTTCTGt < 3:373405/149‑1 (MQ=255) cccTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCTTTGGGCTGTGTGCGGGTTATGCTGTCGGCGCCACCAACCTGTAGCCAACCCCCGCCTCG‑GTAATGATGAACCGCGGCGCCGTGGGGTCATc < 5:54684/133‑1 (MQ=255) cccTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCTTTGGGCTGTGTGCGGGTTATGCTGTCGGCGCCACCAACCTGTAGCCAACCCCCGCCTCG‑GTAATGATGAACCGCGGCGCCGTGGGGTCATc > 6:54684/1‑133 (MQ=255) ccTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCTTTGGGCTGTGTGCGGGTTATGCTGTCGGCGCCACCAACCTGTAGCCAACCCCCGCCTCG‑GTAATGATGAACCGCGGCGCCGTGGGGTCATCGCCCAGCTTCTGTCGCa < 3:339635/149‑1 (MQ=255) ttGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCTTTGGGCTGTGTGCGGGTTATGCTGTCGGCGCCACCAACCTGTAGCCAACCCCCGCCTCG‑GTAATGATGAACCGCGGCGCCGTGGGGTCATCGCCCAGCTTCTGTCg > 7:99317/1‑145 (MQ=255) aCGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCTTTGGGCTGTGTGCGGGTTATGCTGTCGGCGCCACCAACCTGTAGCCAACCCCCGCCTCG‑GTAATGATGAACCGCGGCGCCGTgggg > 8:174556/1‑121 (MQ=255) aCGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCTTTGGGCTGTGTGCGGGTTATGCTGTCGGCGCCACCAACCTGTAGCCAACCCCCGCCTCG‑GTAATGATGAACCGCGGCGCCGTgggg < 7:174556/121‑1 (MQ=255) cgcgTGCAGGCCCTTCAGGCGTTCGCGCAGGCCTTTGGGCTGTGTGCGGGTTATGCTGTCGGCGCCACCAAGCTGTAGCCAACCCCCGCCTCG‑GTAATGATGAACCGCGGCGCCGTGGGGTCATCGCCCAGCTTCTGTCGCAGATGccc < 8:268202/149‑1 (MQ=255) gTCCAGGCCCTGCAGGCGTTCGCCCAGCCCTTTGGGCTGTGTGCGGGTTATGCTGTCGGCGCCACCAACCTGTAGCCAACCCCCGCCTCG‑GTAATGATGAACCGCGGCGCCGTGGGGTCATCGCCCAGCTTCTGTCGCAGATGCCCGAc < 6:220711/149‑1 (MQ=255) gCCCTGCAGGCGTTCGCCCAGCCCTTTGGGCTGTGTGCGGGTTACGCTGTCGGCGCCACCAACCTGTAGCCAACCCCCGCCTCG‑GTAATGATGAACCGCGGCGCCGTGGGGTCATCGCCCAGCTTCTGTCGCAGATGCCCGACCACGAt < 1:351411/149‑1 (MQ=255) gTTCGCCCAGCCCTTTGGGCTGTGTGCGGGTTATGCTGTCGGCGCCACCAACCTGTAGCCAACCCCCGCCTCG‑GTAATGATGAACCGCGGCGCCGTGGGGTCATCGCCCAGCTTCTGTCGCAGATGCCCGACCACGATGCGCAGGTAGt < 8:99317/149‑1 (MQ=255) gCCCAGCCCTTTGGGCTGTGTGCGGGTTATGCTGTCGGCGCCACCAACCTGTAGCCAACCCCCGCCTCG‑GTAATGATGAACCGCGGCGCCGTGGGGTCATCGCCCAGCTTCTGTCGCAGATGCCCGACCACGATGCGCAGGTAGTggg > 5:123068/1‑148 (MQ=255) ccAGCCCTTTGGGCTGTGTGCGGGTTATGCTGTCGGCGCCACCAACCTGTAGCCAACCCCCGCCTCG‑GTAATGATGAACCGCGGCGCCGTGGGGTCATCGCCCAGCTTCTGTCGCAGATGCCCg < 6:187683/124‑1 (MQ=255) ccAGCCCTTTGGGCTGTGTGCGGGTTATGCTGTCGGCGCCACCAACCTGTAGCCAACCCCCGCCTCG‑GTAATGATGAACCGCGGCGCCGTGGGGTCATCGCCCAGCTTCTGTCGCAGATGCCCg > 5:187683/1‑124 (MQ=255) ccAGCCCTTTGGGCTGTGTGCGGGTTATGCTGTCGGCGCCACCAACCTGTAGCCAACCCCCGCCTCG‑GTAATGATGAACCGCGGCGCCGTGGGGTCATCGCCCAGCTTCTGTCGCAGATGCCCGACCACGATGCGCAGGTAGTGGGTa > 4:166942/1‑148 (MQ=255) cAGCCCTTTGGGCTGTGTGCGGGTTATGCTGTCGGCGCCACCAACCTGTAGCCAACCCCCGCCTCG‑GTAATGATGAACCGCGGCGCCGTGGGGTCATCGCCCAGCTTCTGTCGCAGATGCCCGACCACGATGCGCAGGTAGTGGGTAtc > 7:144316/1‑149 (MQ=255) cccTTTGGGCTGTGTGCGGGTTATGCTGTCGGCGCCACCAACCTGTAGCCAACCCCCGCCTCG‑GTAATGATGAACCGCGGCGCCGTGGGGTCATCGCCCAGCTTCTGTCGCAGATGCCCGACCACGATGCGCa > 6:63814/1‑133 (MQ=255) cccTTTGGGCTGTGTGCGGGTTATGCTGTCGGCGCCACCAACCTGTAGCCAACCCCCGCCTCG‑GTAATGATGAACCGCGGCGCCGTGGGGTCATCGCCCAGCTTCTGTCGCAGATGCCCGACCACGATGCGCa < 5:63814/133‑1 (MQ=255) ccTTTGGGCTGTGTGCGGGTTATGCTGTCGGCGCCACCAACCTGTAGCCAACCCCCGCCTCGAGTAATGATGAACCGCGGCGCCGTGGGGTCATCGCCCAGCTTCTGTCGCAGATGCCCGACCACGATGCGCAGGTAGTGGGTAtcctc > 1:328441/1‑149 (MQ=255) cTTTGGGCTGTGTGCGGGTTATGCTGTCGGCGCCACCAACCTGTAGCCAACCCCCGCCTCG‑GTAATGATGAACCGCGGCGCCGTGGGGTCATCGCCCAGCTTCTGTCGCAGATGCCCGACCACGATGCGCAGGTAGTGGGTATCCTCCg > 1:185778/1‑149 (MQ=255) | GGGTAGACATCATCTGGATCAAGTCGCGCCCGTTGGGCCTGGGCGCGCGACGCTACCTGGAAGTCATGCGCCAGCTGTTCGAGAAGGAGCCCCCCAGGGCCTGATATCCCTTGCACGCGTCCAGGCCCTGCAGGCGTTCGCCCAGCCCTTTGGGCTGTGTGCGGGTTATGCTGTCGGCGCCACCAACCTGTAGCCAACCCCCGCCTCG‑GTAATGATGAACCGCGGCGCCGTGGGGTCATCGCCCAGCTTCTGTCGCAGATGCCCGACCACGATGCGCAGGTAGTGGGTATCCTCCG > NC_002947/4697176‑4697471 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |