| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,701,515 | C→G | 5.9% | A649P (GCG→CCG) | kdpB ← | K+ transporting ATPase subunit KdpB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,701,515 | 0 | C | G | 5.9% | 275.8 / 5.9 | 85 | A649P (GCG→CCG) | kdpB | K+ transporting ATPase subunit KdpB |
| Reads supporting (aligned to +/- strand): ref base C (37/43); new base G (3/2); total (40/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.63e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.21e-01 | |||||||||||
AATGCCGGGCGTAGATAAGCAGTCATGGCGGCCTCCTCAGACCAGGTTCAGGGCGTTGAGCAGCAGGTCGATCAGCTTGATCCCGGCAAACGGCACCACAATGCCACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCGGGATCAGCACGATAATGATCAGCGCGTTGAACACGATCGCCGACAGGATCGCGCTCTGCGGGCTGGCCAGTTGCATCAGGTTGAGCACACCCAGTTGCGGGTAGAT > NC_002947/4701369‑4701662 | aaTGCCGGGCGTAGATAAGCAGTCATGGCGGCCTCCTCAGACCAGGTTCAGGGCGTTGAGCAGCAGGTCGATCAGCTTGATCCCGGCAAACGGCACCACAATGCCACCCAGCTCGTAGATCAGCAGGTTGCGCCGCAACAGGTGcgcc < 1:61035/148‑1 (MQ=255) gATAAGCAGTCATGGCGGCCTCCTCAGACCAGGTTCAGGGCGTTGAGCAGCAGGTCGATCAGCTTGATCCCGGCAAACGGCACCACAATGCCACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTg < 6:145204/149‑1 (MQ=255) aTAAGCAGTCATGGCGGCCTCCTCAGACCAGGTTCAGGGCGTTGAGCAGCAGGTCGATCAGCTTGATCCCGGCAAACGGCACCACAATGCCACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGc < 2:348149/149‑1 (MQ=255) aTAAGCAGTCATGGCGGCCTCCTCAGACCAGGTTCAGGGCGTTGAGCAGCAGGTCGATCAGCTTGATCCCGGCAAACGGCACCACAATGCCACCCAGCCCGTAGATAAGCAGGTTGCGCCGAAACAGGTGCGCC‑GCACTGGCCGCCTg > 7:75051/1‑148 (MQ=255) tAAGCAGTCATGGCGGCCTCCTCAGACCAGGTTCAGGGCGTTGAGCAGCAGGTCGATCAGCTTGATCCCGGCAAACGGCACCACAATGCCACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGc < 4:397309/148‑1 (MQ=255) aaGCAGTCATGGCGGCCTCCTCAGACCAGGTTCAGGGCGTTGAGCAGCAGGTCGATCAGCTTGATCCCGGCAAACGGCACCACAATGCCACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCAc > 8:288777/1‑149 (MQ=255) aaGCAGTCATGGCGGCCTCCTCAGACCAGGTTCAGGGCGTTGAGCAGCAGGTCGATCAGCTTGATCCCGGCAAACGGCACCACAATGCCACCCAGCCCGGAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCAc > 6:414344/1‑149 (MQ=255) gCAGTCATGGCGGCCTCCTCAGACCAGGTTCAGGGCGTTGAGCAGCTGGTCGATCAGCTTGATCCCGGCAAACGGCACCACAATGCCACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCAcgc < 4:214694/149‑1 (MQ=255) gTCATGGCGGCCTCCTCAGACCAGGTTCAGGGCGTTGAGCAGCAGGTCGATCAGCTTGATCCCGGCAAACGGCACCACAATGCCACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCa > 4:167252/1‑149 (MQ=255) aTGGCGGCCTCCTCAGACCAGGTTCAGGGCGTTGAGCAGCAGGTCGATCAGCTTGATCCCGGCAAACGGCACCACAATGCCACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCAcc < 2:211397/148‑1 (MQ=255) gcggcCTCCTCAGACCAGGTTCAGGGCGTTGAGCAGCAGGTCGATCAGCTTGATCCCGGCAAACGGCACCACAATGCCACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCAc > 6:69113/1‑149 (MQ=255) gcggcCTCCTCAGACCAGGTTCAGGGCGTTGAGCAGCAGGTCGATCAGCTTGATCCCGGCAAACGGCACCACAATGCCACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCAc < 5:69113/149‑1 (MQ=255) ctcAGACCAGGTTCAGGGCGTTGAGCAGTAGGTCGATCAGCTTGATCCCGGCAAACGGCACCACAATGCCACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAgcgc > 2:184020/1‑148 (MQ=255) ctcAGACCAGGTTCAGGGCGTTGAGCAGCAGGTCGATCAGCTTGATCCCGGCAAACGGCACCACAATGCCACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAgcgc > 6:91118/1‑148 (MQ=255) ctcAGACCAGGTTCAGGGCGTTGAGCAGCAGGTCGATCAGCTTGATCCCGGCAAACGGCACCACAATGCCACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAgcgc > 2:376751/1‑148 (MQ=255) aGACCAGGTTCAGGGCGTTGAGCAGCAGGTCGATCAGCTTGATCCCGGCAAACGGCACCACAATGCCACCCAGCCCGCAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGc < 5:414344/149‑1 (MQ=255) gACCAGGTTCAGGGCGTTGAGCAGCAGGTCGATCAGCTTGATCCCGGCAAACGGCACCACAATGCCACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCg > 2:268612/1‑149 (MQ=255) gACCAGGTTCAGGGCGTTGAGCAGCAGGTCGATCAGCTTGATCCCGGCAAACGGCACCACAATGCCACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCg < 5:91118/149‑1 (MQ=255) aCCAGGTTCAGGGCGTTGAGCAGCAGGTCGATCAGCGTGATCCCGGCAAACGGCACCACAATGCCACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCgg < 7:298752/149‑1 (MQ=255) ccAGGTTCAGGGCGTTGAGCAGCAGGTCGATCAGCTTGATCCCGGCAAACGGCACCACAATGCCACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCggg < 1:376751/149‑1 (MQ=255) ccAGGTTCAGGGCGTTGAGCAGCAGGTCGATCAGCTTGATCCCGGCAAACGGCACCACAATGCCACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCggg < 3:207974/149‑1 (MQ=255) aGGTTCAGGGCGTTGAGCAGCAGGTCGATCAGCTTGATCCCGGCAAACGGCACCACAATGCCACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCGGGAt > 3:211901/1‑149 (MQ=255) ggTTCAGGGCGTTGAGCAGCAGGTCGATCAGCTTGATCCCGGCAAACGGCACCACAATGCCACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCGGGATc < 4:211901/149‑1 (MQ=255) gTTCAGGGCGTTGAGCAGCAGGTCGATCAGCTTGATCCCGGCAAACGGCACCACAATGCCACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCAcccc > 6:374377/1‑129 (MQ=255) gTTCAGGGCGTTGAGCAGCAGGTCGATCAGCTTGATCCCGGCAAACGGCACCACAATGCCACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCAcccc < 5:374377/129‑1 (MQ=255) gTTCAGGGCGTTGAGCAGCAGGTCGATCAGCTTGATCCCGGCAAACGGCACCACAATGCCACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCGGGATCa < 7:276308/149‑1 (MQ=255) ttCAGGGCGTTGAGCAGCAGGTCGATCAGCTTGATCCCGGCAAACGGCACCACAATGCCACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCGGGATCAg > 7:11092/1‑149 (MQ=255) aGGGCGTTGAGCAGCAGGTCGATCAGCTTGATCCCGGCAAACGGCACCACAATGCCACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCGGGATCAGCa < 5:376875/148‑1 (MQ=255) gCGTTGAGCAGCAGGTCGATCAGCTTGATCCCGGCAAACGGCACCACAATGCCACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTg < 1:204916/102‑1 (MQ=255) gCGTTGAGCAGCAGGTCGATCAGCTTGATCCCGGCAAACGGCACCACAATGCCACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTg > 2:204916/1‑102 (MQ=255) gTTGAGCAGCAGGTCGATCAGCTTGATCCCGGCAAACGGCACCACAATGCCACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAg > 2:363780/1‑126 (MQ=255) gTTGAGCAGCAGGTCGATCAGCTTGATCCCGGCAAACGGCACCACAATGCCACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAg < 1:363780/126‑1 (MQ=255) gAGCAGCAGGTCGATCAGCTTGATCCCGGCAAACGGCACCACAATGCCACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCGGGATCAGCACGATAATGa > 2:171554/1‑149 (MQ=255) agcagGTCGATCAGCTTGATCCCGGCAAACGGCACCACAATGCCACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCGGGATCAGCACGATAATGATCAg > 5:181122/1‑149 (MQ=255) gcagGTCGATCAGCTTGATCCCGGCAAACGGCACCACAATGCCACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGgcc > 1:196609/1‑95 (MQ=255) gcagGTCGATCAGCTTGATCCCGGCAAACGGCACCACAATGCCACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGgcc < 2:196609/95‑1 (MQ=255) gcagGTCGATCAGCTTGATCCCGGCAAACGGCACCACAATGCCACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCGGGATCAGCACGATAATGATCAgc < 6:181122/149‑1 (MQ=255) cagGTCGATCAGCTTGATCCCGGCAAACGGCACCACAATGCCACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCggg < 3:167930/127‑1 (MQ=255) cagGTCGATCAGCTTGATCCCGGCAAACGGCACAACAATGCAACCCAGCCAGTAGATCAGCAGGTTGCGCAGCAACAGGTGCGCC‑GCAATGGCCGCCTGAACGCGCACCCAACGCAGCGCCAGCggg > 4:167930/1‑127 (MQ=255) gTCGATCAGCTTGATCCCGGCAAACGGCACCACAATGCCACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCGGGATCAGCACGATAATGATCAGCGCGt > 3:397938/1‑149 (MQ=255) gTCGATCAGCTTGATCCCGGCAAACGGCACCACAATGCCACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCGGGATCAGCACGATAATGATCAGCGCGt > 2:121060/1‑149 (MQ=255) gATCAGCTTGATCCCGGCAAACGGCACCACAATGCCACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCGGGATCAGCACGATAATGATCAGCGCGTTGa < 8:11092/149‑1 (MQ=255) aTCAGCTTGATCCCGGCAAACGGCACCACAATGCCACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCGGGATCAGCACGATAATGAt < 1:57762/137‑1 (MQ=255) aTCAGCTTGATCCCGGCAAACGGCACCACAATGCCACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCGGGATCAGCACGATAATGAt > 2:57762/1‑137 (MQ=255) gCTTGATCCCGGCAAACGGCACCACAATGCCACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCGGGATCAGCACGATAATGATCAGCGCGTTGAacac > 5:127431/1‑148 (MQ=255) gATCCCTGCAAACGGCACCACAATGCCACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGAAGCGCCAGCGGGATCAGCACGATAATGATCAGCGCGTTGAACACGATc < 2:6849/148‑1 (MQ=255) ccGGCAAACGGCACCACAATGCCACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCGGGATCAGCACGATAATGATCAGCGCGTTGAACACGATCGCCGa > 3:64654/1‑149 (MQ=255) ccGGCAAACGGCACCACAATGCCACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCGGGATCAGCACGATAATGATCAGCGCGTTGAACACGATCGCCGa > 7:374900/1‑149 (MQ=255) cGGCAAACGGCACCACAATGCCACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCGGGATCAGCACGATAATGATCAGCGCGTTGAACACGATCGCCGa > 5:188448/1‑148 (MQ=255) cGGCAAACGGCACCACAATGCCACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCGGGATCAGCACGATAATGATCAGCGCGTTGAACACGATCGCCGAc < 6:188448/149‑1 (MQ=255) cGGCAAACGGCACCACAATGCCACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCGGGATCAGCACGATAATGATCAGCGCGTTGAACACGATCGCCGAc < 1:121060/149‑1 (MQ=255) cGGCAAACGGCACCACAATGCCACACAGCACGTAGATCATCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCTCCAGCGGGATCAGCACGATAATCATCACCGCGATGAACACGATCGCCGa > 4:119906/1‑148 (MQ=255) ggCAAACGGCACCACAATGCCACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCGGGATCAGCACGATAATGATCAGCGCGTTGAACACGATCGCCGACa < 1:184020/149‑1 (MQ=255) gCAAACGGCACCACAATGCCACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCGGGATCAGCACGATAATGATCAGCGCGTTGAACACGATCGCCGACAg < 4:64654/149‑1 (MQ=255) aaaCGGCACCACAATGCCACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCGGGATCAGCACGATAATGATCAGCGCGTTGAACACGATCGCCGACAGGa < 2:26822/149‑1 (MQ=255) aCGGCACCACAATGCCACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCACACCCCACGCAGCGCCAGCGGGATCAGCACGATAATGAACAGCGCGATGAACACGATCGCCGACAGGATc > 5:156935/1‑149 (MQ=255) cGGCACCACAATGCCACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCGGGATCAGCACGATAATGATCAGCGCGTTGAACACGATCGCCGACAGGATcg < 2:222533/149‑1 (MQ=255) ggCACCACAATGCCACCCAGCCCGTAGATCAGCAGGTTGCGCCGCACCAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCGGGATCAGCACGATAATGATCAGCGCGTTGAACACGATCGCCGACAGGATcgc > 3:54883/1‑149 (MQ=255) gcaagacaATGCCACCCAGCCCGTAGATGAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCACACCCCACGCAGCGCCAGCGGGATCAGCACGATAATGATCAGCGCGTTGAACACGATCGCCGACAGGATcgcg < 6:156935/144‑1 (MQ=255) accacAATGCCACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCGGGATCAGCACGATAATGATCAGCGCGTTGAACACGATCGCCGACAGGATCGCGct > 7:216255/1‑149 (MQ=255) cacaATGCCACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCGGGATCAGCACGATAATGATCAGCGCGTTGAACACGATCGCCGACAGGATCGCGctct > 6:383799/1‑149 (MQ=255) aaTGCCACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCGGGATCAGCACGATAATGATCAGCGCGTTGAACACGATCGCCGACAGGATCGCGCTCTGCg > 6:305870/1‑149 (MQ=255) cACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCCGGCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCGGGATCAGCACGATAATGATCAGCGCGTTGAACACGATCGCCGACAg > 1:291114/1‑131 (MQ=255) cACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCGGGATCAGCACGATAATGATCAGCGCGTTGAACACGATCGCCGACAg < 2:291114/130‑1 (MQ=255) cACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCGGGATCAGCACGATAATGATCAGCGCGTTGAACACGATCGCCGACAGGATCGCGCTCTGCGGGCTg > 8:42447/1‑149 (MQ=255) cACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCGGGATCAGCACGATAATGATCAGCGCGTTGAACACGATCGCCGACAGGATCGCGCTCTGCGGGCTg < 8:374900/149‑1 (MQ=255) cACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCGGGATCAGCACGATAATGATCAGCGCGTTGAACACGATCGCCGACAGGATCGCGCTCTGCGGGCTg < 4:397938/149‑1 (MQ=255) ccgaGCCCGTAGATCAGCTGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCTCGCGCACCCCACGCAGGGCCAGCGGGATCAGCACGATAATGATCAGCGCGTTGAACACGATCGCCGTCAGGATCGCGCTCTGCGGGCTGGc < 4:54883/146‑1 (MQ=255) gCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCGGGATCAGCACGATAATGATCAGCGCGTTGAACACGATCGCCGACAGGATcgcg > 7:274219/1‑131 (MQ=255) gCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCGGGATCAGCACGATAATGATCAGCGCGTTGAACACGATCGCCGACAGGATcgcg < 8:274219/131‑1 (MQ=255) cccGTAGATCAGCATGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCGGTATCAGCACGATAATGATCAGCGCGTTGAACACGATCTCCGACAGGATCGCGCTCTGCGGGCTGGCAAGtt < 6:271023/149‑1 (MQ=255) cccGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCGGGATCAGCACGATAATGATCAGCGCGTTGAACACGATCGCCGACAGGATCGCGCTCTGCGGGCTGGCCAGtt < 6:127431/149‑1 (MQ=255) cGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCGGGATCAGCACGATAATGATCAGCGCGTTGAACACGATCGCCGACAGGATCGCGCTCTGCGGGCTGGCCAGTTGc < 8:216255/149‑1 (MQ=255) gTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCGGGATCAGCACGATAATGATCAGCGCGTTGAACACGATCGCCGACAGGATCGCGCTCTGCGGGCTgg < 5:253750/140‑1 (MQ=255) gTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCGGGATCAGCACGATAATGATCAGCGCGTTGAACACGATCGCCGACAGGATCGCGCTCTGCGGGCTgg > 6:253750/1‑140 (MQ=255) gATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCGGGATCAGCACGATAATGATCAGCGCGTTGAACACGATCGCCGACAGGATCGCGCTCTGCGGGCTGGCCAGTTGCATCa < 7:288777/149‑1 (MQ=255) cagGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCGGGATCAGCACGATAATGATCAGCGCGTTGAACACGATCGCCGACAGGATCGCGCTCTGCGGGCTGGCCAGTTGCATCAGGTTGa < 5:305870/149‑1 (MQ=255) cagtGCGGCGCACCTGTTGCGGC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCGGGATCAGCACGATAATGATCAGCGCGTTGAACACGATCGCCGACa > 6:231909/4‑108 (MQ=255) cagtGCGGCGCACCTGTTGCGGC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCGGGATCAGCACGATAATGATCAGCGCGTTGAACACGATCGCCGACa < 5:231909/105‑1 (MQ=255) tGCGGCGCACCTGTTGCGGC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCGGGATCAGCACGATAATGATCAGCGCGTTGAACACGATCGCCGACAGGATCGCGCTCTGCGGGCTGGCCAGTTGCATCAGGTTGAGcaca > 7:235057/1‑149 (MQ=255) tGCGGCGCACCTGTTGCGGC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCGGGATCAGCACGATAATGATCAGCGCGTTGAACACGATCGCCGACAGGATCGCGCTCTGCGGGCTGGCCAGTTGCATCAGGTTGAGcaca > 8:102353/1‑149 (MQ=255) gccgcAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCGGGATCAGCACGATAATGATCAGCGCGTTGAACACGATCGCCGACAGGATCGCGCTCTGCGGGCTGGCCAGTTGCATCAGGTTGAGCACAcc > 4:169929/1‑148 (MQ=255) gcAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCGGGATCAGCACGATAATGATCAGCGCGTTGAACACGATCGCCGACAGGATCGCGCTCTGCGGGCTGGCCAGTTGCATCAGGTTGAGCACACCCAGt < 3:167252/149‑1 (MQ=255) aaCAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCGGGATCAGCACGATAATGATCAGCGCGTTGAACACGATCGCCGACAGGATCGCGCTCTGCGGGCTGGCCAGTTGCATCAGGTTGAGCACACCCAg < 2:402928/146‑1 (MQ=255) aaCAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCGGGATCAGCACGATAATGATCAGCGCGTTGAACACGATCGCCGACAGGATCGCGCTCTGCGGGCTGGCCAGTTGCATCAGGTTGAGCACACCCAg > 1:402928/1‑146 (MQ=255) ttGCGGC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCGGGATCAGCACGATAATGATCAGCGCGTTGAACACGATCGCCGACAGGATCGCGCTCTGCGGGCTGGCCAGTTGCATCAGGTTGAGCACACCCAGTTGCgg < 8:235057/146‑1 (MQ=255) cgcc‑gcACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCGGGATCAGCACGATAATGATCAGCGCGTTGAACACGATCGCCGACAGGATCGCGCTCTGCGGGCTGGCCAGTTGCATCAGGTTGAGCACACCCAGTTGCGGGTAg < 3:119906/148‑1 (MQ=255) gcc‑gcACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCGGGATCAGCACGATAATGATCAGCGCGTTGAACACGATCGCCGACAGGATCGCGCTCTGCGGGCTGGCCAGTTGCATCAGGTTGAGCACACCCAGTTGCGGGTAGAt > 2:30047/1‑149 (MQ=255) | AATGCCGGGCGTAGATAAGCAGTCATGGCGGCCTCCTCAGACCAGGTTCAGGGCGTTGAGCAGCAGGTCGATCAGCTTGATCCCGGCAAACGGCACCACAATGCCACCCAGCCCGTAGATCAGCAGGTTGCGCCGCAACAGGTGCGCC‑GCACTGGCCGCCTGCACGCGCACCCCACGCAGCGCCAGCGGGATCAGCACGATAATGATCAGCGCGTTGAACACGATCGCCGACAGGATCGCGCTCTGCGGGCTGGCCAGTTGCATCAGGTTGAGCACACCCAGTTGCGGGTAGAT > NC_002947/4701369‑4701662 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |