| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,721,636 | A→G | 6.5% | intergenic (‑41/+23) | PP_4178 ← / ← htpG | dienelactone hydrolase family protein/chaperone protein HtpG |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,721,636 | 0 | A | G | 6.5% | 273.5 / 6.6 | 92 | intergenic (‑41/+23) | PP_4178/htpG | dienelactone hydrolase family protein/chaperone protein HtpG |
| Reads supporting (aligned to +/- strand): ref base A (42/44); new base G (3/3); total (45/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.15e-01 | |||||||||||
ACCAGCCCTGGGCGGCCCAGCGCACCCGGCTCATAGACCAAACGGCTTTC‑GTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAGGGCCGCCTGATCGAACAGGATGTGCGACAGCTCGGCGAAACGGTC > NC_002947/4721492‑4721784 | aCCAGCCCTGGGCGGCCCAGCGCACCCGGCTCATAGACCAAACGGCTTTC‑GTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCgg > 6:340576/1‑149 (MQ=255)aCCAGCCCTGGGCGGCCCAGCGCACCCGGCTCATAGACCAAACGGCTTTC‑GTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCg < 7:244142/148‑1 (MQ=255)aCCAGCCCTGGGCGGCCCAGCGCACCCGGCTCATAGACCAAACGGCTTTC‑GTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCACGCCGAAGCg > 8:244142/1‑148 (MQ=255) cTGGGCGGCCCAGCGCACCCGGCTCATAGACCAAACGGCTTTC‑GTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGc < 1:278687/149‑1 (MQ=255) tGGGCGGCCCAGCGCACCCGGCTCATAGACCAAACGGCTTTC‑GTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCt > 6:304615/1‑149 (MQ=255) ggcggcCCAGCGCACCCGGCTCATAGACCAAACGGCTTTC‑GTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCtg < 7:210160/148‑1 (MQ=255) ggcggcCCAGCGCACCCGGCTCATAGACCAAACGGCTTTC‑GTAGGTCTTGCCAGACAGGTCATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCtgt < 7:183429/149‑1 (MQ=255) cggcCCAGCGCACCCGGCTCATAGACCAAACTGCTTTC‑GTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGc < 2:43986/149‑1 (MQ=255) gcCCAGCGCACCCGGCTCATAGACCAAACGGCTTTC‑GTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCAt < 8:141142/149‑1 (MQ=255) cccAGCGCACCCGGCTCATAGACCAAACGGCTTTC‑GTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCTTCGGCGGGCttttttatga > 2:152412/1‑139 (MQ=255) cccAGCGCACCCGGCTCATAGACCAAACGGCTTTC‑GTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCTTCGGCGGGCttttttatga < 1:152412/146‑8 (MQ=255) aGCGCACCCGGCTCATAGACCAAACGGCTTTC‑GTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGTGGGCTTTGCTGTGCATCAAc < 7:354711/149‑1 (MQ=255) gcACCCGGCTCATAGACCAAACGGCTTTCGGTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACt > 1:238632/1‑148 (MQ=255) gcACCCGGCTCATAGACCAAACGGCTTTC‑GTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCa < 6:254822/149‑1 (MQ=255) cACCCGGCTCATAGACCAAACGGCTTTC‑GTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCaa < 7:116808/149‑1 (MQ=255) cACCCGGCTCATAGACCAAACGGCTTTC‑GTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCaa < 5:340576/149‑1 (MQ=255) ccGGCTCATAGACCAAACGGCTTTC‑GTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCtgt < 6:348960/134‑1 (MQ=255) ccGGCTCATAGACCAAACGGCTTTC‑GTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCtgt > 5:348960/1‑134 (MQ=255) ccGGCTCATAGACCAAACGGCTTTC‑GTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAg > 1:22852/1‑147 (MQ=255) ggCTCATAGACCAAACGGCTTTC‑GTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGa < 8:58396/149‑1 (MQ=255) aTAGACCAAACGGCTTTC‑GTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCtgt > 6:166430/1‑127 (MQ=255) aTAGACCAAACGGCTTTC‑GTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCtgt < 5:166430/127‑1 (MQ=255) tAGACCAAACGGCTTTC‑GTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACCCAAGCAGACAGCTc < 5:92386/149‑1 (MQ=255) aCCAAACGGCTTTC‑GTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGAc > 4:303857/1‑149 (MQ=255) aaCGGCTTTC‑GTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGc > 8:218743/1‑121 (MQ=255) aaCGGCTTTC‑GTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGc < 7:218743/121‑1 (MQ=255) cTTTC‑GTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCtt < 6:333928/149‑1 (MQ=255) gTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAGAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTCGCTTGTTc < 8:171596/148‑1 (MQ=255) gTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGtt > 6:14545/1‑147 (MQ=255) tAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAg > 6:246729/1‑149 (MQ=255) tCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCtgt > 1:299288/1‑104 (MQ=255) tCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCtgt < 2:299288/104‑1 (MQ=255) tCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGAc < 1:33587/130‑1 (MQ=255) tCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGAc > 2:33587/1‑130 (MQ=255) ccAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAAc > 3:48195/1‑149 (MQ=255) ggTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCa < 3:229326/120‑1 (MQ=255) ggTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCa > 4:229326/1‑120 (MQ=255) gTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAgccg > 5:313328/1‑149 (MQ=255) gTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAgc > 4:331553/1‑147 (MQ=255) gTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAgc < 3:331553/147‑1 (MQ=255) gATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAgccgcc > 4:107840/1‑149 (MQ=255) aaaCCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCTTCGGCGGGCtttttt < 1:384385/84‑4 (MQ=38) aaaCCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCTTCGGCGGGCtttttt > 2:384385/1‑81 (MQ=38) aaaCCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCggg > 3:326008/1‑149 (MQ=255) aCCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGATCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTc > 3:231463/1‑149 (MQ=255) ccAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTa > 8:241883/1‑136 (MQ=255) ccAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTa < 7:241883/136‑1 (MQ=255) ccAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTcc > 8:288624/1‑149 (MQ=255) gCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCtt > 6:301793/1‑148 (MQ=255) cGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCa < 3:303857/149‑1 (MQ=255) gATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAg < 4:48195/149‑1 (MQ=255) ttCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTTTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGc < 5:388207/149‑1 (MQ=255) cgacgaTTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCt < 4:202131/148‑1 (MQ=255) gacgaTTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGt > 7:272721/1‑149 (MQ=255) acgaTTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGt > 2:221271/1‑148 (MQ=255) gaTTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTcc < 2:266889/136‑1 (MQ=255) gaTTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTcc > 1:266889/1‑136 (MQ=255) tttGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGgccg > 8:308712/1‑149 (MQ=255) gttcattaAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGgccgc > 8:241560/3‑147 (MQ=255) gCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGgccgcc < 6:313328/148‑1 (MQ=255) gCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGgcc > 5:377902/1‑145 (MQ=255) gCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGgcc < 6:377902/145‑1 (MQ=255) tcatcaAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAgg > 7:94555/1‑149 (MQ=255) catcaAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCt > 5:378265/1‑80 (MQ=255) catcaAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCt < 6:378265/80‑1 (MQ=255) atcaAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAgg < 1:221271/147‑1 (MQ=255) atcaAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAGGgc > 8:21751/1‑149 (MQ=255) atcaAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAGGgc > 2:223842/1‑149 (MQ=255) atcaAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCAACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAGGgc > 5:199679/1‑149 (MQ=255) tcaAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAgg < 4:315030/128‑1 (MQ=255) tcaAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTATGCTGTGCATCAACTCAAGCAGACAGCTCGACAAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAgg > 3:315030/1‑128 (MQ=255) aaGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAGGaccgc < 2:238632/149‑1 (MQ=255) gCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTAGACCAGTAGCTTGTTCACGCCACGAACGAAAGCACCCGGGACCTTAACGCTTACACCGGACAACAgggacccc > 3:288468/1‑143 (MQ=255) cTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAGGGCCGCCTGAt < 5:304615/149‑1 (MQ=255) cTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAGGGCCGCCTGATCg < 7:77398/148‑1 (MQ=255) ggCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAGGGCCGCCTGATCGAACa < 8:272721/148‑1 (MQ=255) gCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAGGGCCGCCTGATCGAACAg < 7:288624/148‑1 (MQ=255) cACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAGGGCCGCCTGATCGAACatcc < 4:231463/149‑4 (MQ=255) cTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAGGGCCGCCTGATCg < 1:119202/140‑1 (MQ=255) cTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAGGGCCGCCTGATCg > 2:119202/1‑140 (MQ=255) gTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAGGGCCGCCTGATCGAACAGGATGTGc > 4:108659/1‑149 (MQ=255) aTAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAGGGCCGCCTGATCGAACAGGATGTGCGAc < 4:326008/149‑1 (MQ=255) tAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAGGGCCGCCTGATCGAACAGGATGTGCGACa < 7:241560/149‑1 (MQ=255) agcaaaGCCCGCTTCGGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAGGGCCGCCTGATCGAACAgg > 3:367694/4‑138 (MQ=255) agcaaaGCCCGCTTCGGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAGGGCCGCCTGATCGAACAgg < 4:367694/135‑1 (MQ=255) aaaaaGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAGGGCCGCCTGATCGAACAGGATGTGCGACAGc > 6:253502/1‑149 (MQ=255) aaaaGCCCGCCGAAGCGGGCTTTGCTGTGCATCACCTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAGGGCCGCCTGATCGAACAGGATGTGCGACAGCt > 5:394882/1‑149 (MQ=255) cccGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCAACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAGGGCCGCCTGATCGAACAGGATGTGCGACAGCTCGGCg < 6:199679/149‑1 (MQ=255) cgccgAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAGGGCCGCCTGATCGAACAGGATGTGCGACAGCTCg < 5:26042/144‑1 (MQ=255) cgccgAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAGGGCCGCCTGATCGAACAGGATGTGCGACAGCTCg > 6:26042/1‑144 (MQ=255) gccgAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAGGGCCGCCTGATCGAACAGGATGTGCGACAGCTCGGCGaaa > 6:296249/1‑149 (MQ=255) ccgAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAGGGCCGCCTGATCGAACAGGATGTGCGACAGCTCGGCGAAAc < 3:107840/149‑1 (MQ=255) aaGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAGGGCCGCCTGATCGAACAGGATGTGCGACAGCTCGGCGAAACGGt > 4:179904/1‑149 (MQ=255) aaGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAGGGCCGCCTGATCGAACAGGATGTGCGACAGCTCGGCGAAACGGt < 5:253502/149‑1 (MQ=255) aGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAGGGCCGCCTGATCGAACAGGATGTGCGACAGCTCGGCGAAACGGTc < 5:246729/149‑1 (MQ=255) | ACCAGCCCTGGGCGGCCCAGCGCACCCGGCTCATAGACCAAACGGCTTTC‑GTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAGGGCCGCCTGATCGAACAGGATGTGCGACAGCTCGGCGAAACGGTC > NC_002947/4721492‑4721784 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |