| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,731,502 | C→A | 7.7% | intergenic (‑59/+35) | lpdG ← / ← sucB | dihydrolipoyl dehydrogenase/2‑oxoglutarate dehydrogenase dihydrolipoyltranssuccinylase subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,731,502 | 0 | C | A | 7.7% | 173.9 / 6.4 | 66 | intergenic (‑59/+35) | lpdG/sucB | dihydrolipoyl dehydrogenase/2‑oxoglutarate dehydrogenase dihydrolipoyltranssuccinylase subunit |
| Reads supporting (aligned to +/- strand): ref base C (29/30); new base A (3/2); total (34/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.23e-02 | |||||||||||
GTCTTCAGACCAAGTTGGGCAGCCTTGATGGCAGCCACATAGCCGCCTGGGCCTGCACCGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCT‑TATCAGCTACAAGCTACAAGCCGCGAACCGCGC‑‑GGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGG‑TACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGATCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCTTGCCGTCGATCAGGCGGTGATCGTACGACAGCGCCAG > NC_002947/4731355‑4731647 | gTCTTCAGACCAAGTTGGGCAGCCTTGATGGCAGCCACATAGCCGCCTGGGCCTGCACCGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCTCTATCAGCTACAAGCTACAAGCCGCGAACCGCGC‑‑GGCCTGGCTTCTTGc < 1:303311/149‑1 (MQ=255) cTTCAGACCAAGTTGGGCAGCCTTGATGGCAGCCACATAGCCGCCTGGGCCTGCACCGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCT‑TATCAGCTACAAGCTACAAGCCGCGAACCGCGC‑‑GGCCTGGCTTCTTGCGaa < 6:17967/149‑1 (MQ=255) aGACCAAGTTGGGCAGCCTTGATGGCAGCCACATAGCCGCCTGGGCCTGCACCGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCT‑TATCAGCTACAAGCTACAAGCCGCGAACCGCGC‑‑GGCCTGGCTTCTTGCGAAGCCa > 3:302180/1‑149 (MQ=255) aGACCAAGTTGGGCAGCCTTGATGGCAGCCACATAGCCGCCTGGGCCTGCACCGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCT‑TATCAGCTACAAGCTACAAGCCGCGAACCGCGC‑‑GGCCTGGCGTCATGGGAAGCCa > 4:48207/1‑149 (MQ=255) aGACCAAGTTGGGCAGCCTTGATGGCAGCCACATAGCCGCCTGGGCCTGAACCGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTACT‑TATCAGCTACAAGCTACAAGCCGCGAACCGCGC‑‑GGCCTGGGATCTTTGGCAGCCa > 4:401059/1‑149 (MQ=255) aCCAAGTTGGGCAGCCTTGATGGCAGCCACATAGCCGCCTGGGCCTGCACCGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCT‑TATCAGCTACAAGCTACAAGCCGCGAACCGCGC‑‑GGCCTGGCTTCTTGCGAAGCCAgg > 2:96097/1‑149 (MQ=255) ccAAGTTGGGCAGCCTTGATGGCAGCCACATAGCCGCCTGGGCCTGCACCGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCT‑TATCAGCTACAAGCTACAAGCCGCGAACCGCGC‑‑GGCCTGGCTTCTTGCGAAGCCAGGc < 1:252621/149‑1 (MQ=255) tGGGCAGCCTTGATGGCAGCCACATAGCCGCCTGGGCCTGCACCGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCT‑TATCAGCTACAAGCTACAAGCCGCGAACCGCGC‑‑GGCCTGGCTTCTTGCGAAGCCAg > 1:303693/1‑141 (MQ=255) tGGGCAGCCTTGATGGCAGCCACATAGCCGCCTGGGCCTGCACCGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCT‑TATCAGCTACAAGCTACAAGCCGCGAACCGCGC‑‑GGCCTGGCTTCTTGCGAAGCCAg < 2:303693/141‑1 (MQ=255) ggCAGCCTTGATTGCAGACACATAGCCGCGTGGGCCTGCACCGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCT‑TATCAGCTACAAGCTACAAGCCGCGAACCGCGC‑‑GGCCTGGCTTCTTGCGAAGCCAGGCCCGGCAca < 8:328539/149‑2 (MQ=255) ggCAGCCTTGATGGCAGCCACATAGCCGCCTGGGCCTGCACCGATTACCACTACGTCGAATTTCTGAGTCATAAAAGATTCCT‑TATCAGCTACAAGCTACAAGCCGCGAACCGTGCCGGGCCTGGCTTCGCAAGAAGCCAGGccgcgc < 7:342136/148‑5 (MQ=37) ttGATGGCAGCCACATAGCCGCCTGGGCCTGCACCGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCT‑TATCAGCTACAAGCTACAAGCCGCGAACCGCGC‑‑GGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGG‑TACGCa > 8:127143/1‑149 (MQ=255) tGGCAGCCACATAGCCGCCTGGGCCTGCACCGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCT‑TATCAGCTACAAGCTACAAGCCGCGAACCGCGC‑‑GGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGG‑TACGCAGcc < 8:277175/148‑1 (MQ=255) aGCCACATAGCCGCCTGGGCCTGCACCGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCT‑TATCAGCTACAAGCTACAAGCCGCGAACCGCGC‑‑GGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGG‑TACGCAGCCAGAgg < 7:505/149‑1 (MQ=255) aGCCACATAGCCGCCTGGGCCTGCACCGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCT‑TATCAGCTACAAGCTACAAGCCGCGAACCGCGC‑‑GGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGG‑TACGCAGCCAGAgg < 4:302180/149‑1 (MQ=255) ccTGGGCCTGCACCGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCT‑TATCAGCTACAAGCTACAAGCCGCGAACCGCGC‑‑GGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGG‑TACGCAGCCAGAGGGTTAGATGTCcag < 5:300446/149‑1 (MQ=255) gCCTGCACCGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCT‑TATCAGCTACAAGCTACAAGCCGCGAACCGCGC‑‑GGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGG‑TACGCAGCCAGAGGGTTAGATGTCcagcagca < 7:127143/149‑1 (MQ=255) ccTGCACCGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCT‑TATCAGCTACAAGCTACAAGCCGCGAACCGCGC‑‑GGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGG‑TACGCAGCCAGAGGGTTAGATGTCcagcagcag > 6:402374/1‑149 (MQ=255) cACCGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCT‑TATCAGCTACAAGCTACAAGCCGCGAACCGCGC‑‑GGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGG‑TACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGc < 1:103168/147‑1 (MQ=255) ccGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCT‑TATCAGCTACAAGCTACAAGCCGCGAACCGCGC‑‑GGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGG‑TACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGa > 6:335441/1‑149 (MQ=255) gATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCT‑TATCAGCTACAAGCTACAAGCCGCGAACCGCGC‑‑GGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGG‑TACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACg > 1:5454/1‑149 (MQ=255) ccACTACGTCGAATTTCTGGGTCATAAAAGATTCCT‑TATCAGCTACAAGCTACAAGCCGCTAACCGCGC‑‑GGCCGGGCGTGTTTCGCAGCCACGCCCCGGACCG‑GACGCCCCCACAGGGGTTTATTTGCAACAGCACGCCGGCCGGCTcg > 6:34461/1‑148 (MQ=255) aCTACGTCGAATTTCTGGGTCATAAAAGATTCCT‑TATCAGCTACAAGCTACAAGCCGCGAACCGCGC‑‑GGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGG‑TACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGATCTTc < 5:402374/149‑1 (MQ=255) cTACGTCGAATTTCTGGGTCATAAAAGATTCCT‑TATCAGCTACAAGCTACAAGCCGCGAACCGCGC‑‑GGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGGCTACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGATCTTc < 1:96097/149‑1 (MQ=255) cTACGTCGAATTTCTGGGTCATAAAAGATTCCT‑TATCAGCTACAAGCTACAAGCCGCGAACCGCGC‑‑GGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGG‑TACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGATCTTc > 4:251898/1‑148 (MQ=255) gTCGAATTTCTGGGTCATAAAAGATTCCT‑TATCAGCTACAAGCTACAAGCCGCGAACCGCGC‑‑GGCCTGGCTTCTTGCGAAGCAACGCCCGGCCCGG‑TACGCCCCCAGATGGTTAGATTTGCAGCAGCAAGCGGGACGGATCTTCcagca > 7:204383/1‑149 (MQ=255) gAATTTCTGGGTCATAAAAGATTCCT‑TATCAGCTACAAGCTACAAGCCGCGAACCGCGC‑‑GGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGG‑TACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGATCTTCCAGCAggg > 2:324152/1‑148 (MQ=255) tttCTGGGTCATAAAAGATTCCT‑TATCAGCTACAAGCTACAAGCCGCGAACCGCGC‑‑GGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGG‑TACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGATCTTCCAGCAGGTTCt < 8:248338/149‑1 (MQ=255) tCTGGGTCATAAAAGATTCCT‑TATCAGCTACAAGCTACAAGCCGCGAACCGCGC‑‑GGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGG‑TACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGATCTTCCAGCAGGTTCtt < 5:335441/148‑1 (MQ=255) ggTCATAAAAGATTCCT‑TATCAGCTACAAGCTACAAGCCGCGAACCGCGC‑‑GGCCTGGCTTCTTGCGAAGCCAGGCCCg < 1:395098/78‑1 (MQ=255) ggTCATAAAAGATTCCT‑TATCAGCTACAAGCTACAAGCCGCGAACCGCGC‑‑GGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGG‑TACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGATCTTCcagca < 3:335036/137‑1 (MQ=255) ggTCATAAAAGATTCCT‑TATCAGCTACAAGCTACAAGCCGCGAACCGCGC‑‑GGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGG‑TACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGATCTTCcagca > 4:335036/1‑137 (MQ=255) tAAAAGATTCCT‑TATCAGCTACAAGCTACAAGCCGCGAACCGCGC‑‑GGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGG‑TACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGATCTTCCAGCAGGtt > 7:149347/1‑136 (MQ=255) tAAAAGATTCCT‑TATCAGCTACAAGCTACAAGCCGCGAACCGCGC‑‑GGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGG‑TACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGATCTTCCAGCAGGtt < 8:149347/136‑1 (MQ=255) tAAAAGATTCCT‑TATCAGCTACAAGCTACAAGCCGCGAACCGCGC‑‑GGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGG‑TACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGATCTTCCAGCAGGTTCTTGATAGTGAc > 8:219649/1‑148 (MQ=255) tAAAAGATTCCT‑TATCAGCTACAAGCTACAAGCCGCGAACCGCGC‑‑GGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGG‑TACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGATCTTCCAGCAGGTTCTTGATAGTGAc > 5:389774/1‑148 (MQ=255) tAAAAGATTCCT‑TATCAGCTACAAGCTACAAGCCGCGAACCGCGC‑‑GGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGG‑TACGCAGCCAGAGGGTTAGATGTACAGCAGCACGCGGGACGGATCTTCCAGCAGGTTCTTGATAGTGAc > 6:341487/1‑148 (MQ=255) tAAAAGATTCCT‑TATCAGCTACAAGCTACAAGCCGCGAACCGCGC‑‑GGCCTGGCTTCGCAAGAAGCCAg > 8:93275/1‑68 (MQ=37) tAAAAGATTCCT‑TATCAGCTACAAGCTACAAGCCGCGAACCGCGC‑‑GGCCTGGCTTCGCAAGAAGCCAg < 7:93275/68‑1 (MQ=37) aaaaGATTCCT‑TATCAGCTACAAGCTACAAGCCGCGAACCGCGC‑‑GGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGG‑TACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGATCTTCCAGCAGGTTCtt > 3:303140/1‑138 (MQ=255) aaaaGATTCCT‑TATCAGCTACAAGCTACAAGCCGCGAACCGCGC‑‑GGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGG‑TACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGATCTTCCAGCAGGTTCtt < 4:303140/138‑1 (MQ=255) aaaaGATTCCT‑TATCAGCTACAAGCTACAAGCCGCGAACCGCGC‑‑GGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGG‑TACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGATCTTCCAGCAGGTTCTTGATAGTGAc > 7:53664/1‑147 (MQ=255) aaaGATTCCT‑TATCAGCTACAAGCTACAAGCCGCGAACCGCGC‑‑GGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGG‑TACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGATCTTCCAGCAGGTTCTTGATAGTGACCAg > 8:317913/1‑149 (MQ=255) aTTCCT‑TATCAGCTACAAGCTACAAGCCGCGAACCGCGC‑‑GGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGG‑TACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGATCTTCCAGCAGGTTCTTGATAGTGACCAGGAAg > 1:91964/1‑149 (MQ=255) agctacaagctacaAGCCGCGAACCGCGC‑‑GGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGG‑TACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGATCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCtt > 3:257524/1‑149 (MQ=255) agctacaagctacaAGCCGCGAACCGCGC‑‑GGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGG‑TACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGATCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCt < 1:206460/148‑1 (MQ=255) caagctacaagcCGCGAACCGCGC‑‑GGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGG‑TACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGATCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCtt < 7:219649/148‑1 (MQ=255) gctacaagcCGCGAACCGCGC‑‑GGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGG‑TACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGATCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCTTGcc < 3:259576/148‑1 (MQ=255) gctacaagcCGCGAACCGCGC‑‑GGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACCG‑GACGCCGCCAGAGGGGTAGATGTCCAGCACCAGGCCGGCCGGAGATTCCCGCACGGTCGTGATAGGTACCAGGAAGGTTACCGCTTCCGTGCCg > 4:259576/1‑149 (MQ=255) caagcCGCGAACCGCGC‑‑GGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGG‑TACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGATCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCTTGCCGTCGa < 2:5454/149‑1 (MQ=255) caagcCGCGAACCGCGC‑‑GGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGG‑TACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGATCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCTTGCCGTCGa > 4:385620/1‑149 (MQ=255) agcCGCGAACCGCGC‑‑GGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGG‑TACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGATCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCTTGCCGTCGATc < 7:317913/149‑1 (MQ=255) gcCGCGAACCGCGC‑‑GGCCTGGCTTCTTTCGAAGCCAGGCCCGGCACGG‑TACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGCCGGATCTTCCAGCAGGTTCTTGATAGTGACAAGGAAGGTTACCGCTTCCTTGCCGTCGCTcc > 6:382020/1‑148 (MQ=255) gcCGCGAACCGCGC‑‑GGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGG‑TACGCAGCCAGAGGGTTAGATGTCca < 6:73219/74‑1 (MQ=255) gcCGCGAACCGCGC‑‑GGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGG‑TACGCAGCCAGAGGGTTAGATGTCca > 5:73219/1‑74 (MQ=255) gcgAACCGCGC‑‑GGCCTGGCTTCTTGCGAAGCCAGGCCCGGCCCGG‑TACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGATCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCTTGCCGTCGATCAGGc > 3:82316/1‑149 (MQ=255) gAACCGCGC‑‑GGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGG‑TACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGATCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCTTGCCGTCGATCAGGCgg < 8:53664/149‑1 (MQ=255) aaCCGCGC‑‑GGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGG‑TACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGATCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCTTGCCGTCGATCAGGCGGt < 3:22359/149‑1 (MQ=255) cgcgc‑‑gGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGG‑TACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGATCTTCCAGCAGGTTCTTGATAGTGACTAGGAAGGTTACCGCTTCCTTGCCGTCGATCAGGCGGTGAt < 3:251898/149‑1 (MQ=255) gc‑‑gGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGG‑TACGCCGCCAGCGGGTTAGATGTCCAGCAGCAGGCGGGACGGATCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCTTGCCGTGGATCAGGCGGTGATCg > 6:91000/1‑148 (MQ=255) gc‑‑gGCCTGGATTCTTGCGAAGCCAGGCCCGGCACGG‑TACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGATCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCTTGCCGTCGATCAGGCGGTGATCGt < 7:328452/149‑1 (MQ=255) c‑‑gGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGG‑TACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGATCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCTTGCCGTCGATCAGGCGGTGATCGTa < 6:389774/149‑1 (MQ=255) gCCTGGCTTCGCAAGAAGCCAGGCCCGGCACGG‑TACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGATCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCTTGCCGTCGATCAGGCGGTGATCGTAc > 7:322475/1‑148 (MQ=255) ccTGGCTTCGCAAGAAGCCAGGCC‑‑GCGCGG‑TTCGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGATCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCTTGCCGTCGATCAGGCGGTGATCGTACGa > 5:393159/1‑147 (MQ=38) ttGCGAAGCCAGGCCCGGCACGG‑TACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGATCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCTTGCCGTCGATCAGGCGGTGATCGTACGACAGCGCCAg > 2:139129/1‑149 (MQ=255) ttGCGAAGCCAGGCCCGGCACGG‑TACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGATCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCTTGCCGTCGATCAGGCGGTGATCGTACGACAGCGCCAg > 5:371820/1‑149 (MQ=255) gCGAAGCCAGGCCCGGCACGG‑TACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGATCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCTTGCCGTCGATCAGGCGGTGATCGTACGACAGCGCCa < 5:382020/146‑1 (MQ=255) cGAAGCCAGGCCCGGCACGG‑TACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGATCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCTTg < 3:384548/111‑1 (MQ=255) cGAAGCCAGGCCCGGCACGG‑TACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGATCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCTTg > 4:384548/1‑111 (MQ=255) | GTCTTCAGACCAAGTTGGGCAGCCTTGATGGCAGCCACATAGCCGCCTGGGCCTGCACCGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCT‑TATCAGCTACAAGCTACAAGCCGCGAACCGCGC‑‑GGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGG‑TACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGATCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCTTGCCGTCGATCAGGCGGTGATCGTACGACAGCGCCAG > NC_002947/4731355‑4731647 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |