| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,740,844 | C→G | 20.6% | intergenic (+81/+672) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,740,844 | 0 | C | G | 20.6% | 143.0 / 33.0 | 68 | intergenic (+81/+672) | gltA/yeiW | citrate synthase/putative oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base C (25/29); new base G (7/7); total (32/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01 | |||||||||||
GGCCGTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAG‑AAGGCTGCCCTCGGGCAGCCTTTTTTTATTTTTCTGGTGCCGGCCTCTTCGCGGCCTTGCC‑‑CGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCGGTGTGCACCTGG > NC_002947/4740695‑4740992 | ggCCGTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAG‑AAGGCTGCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGc > 5:344767/1‑149 (MQ=255)ggCCGTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAG‑AAGGCTGCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTAGCGGCCTTGc > 5:4907/1‑149 (MQ=255) gCCGTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAG‑AAGGCTGCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGcc > 8:348315/1‑149 (MQ=255) cgcgCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAG‑AAGGCTGCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGGCAAGGC‑‑CGCGaa < 5:314787/149‑1 (MQ=255) gcgcCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAACGCTGCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCC‑‑CGCGaa < 1:328402/149‑1 (MQ=255) gcgcCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAG‑AAGGCTGCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCC‑‑CGCGAag < 2:292235/149‑1 (MQ=255) cgcCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAG‑AAGGCTGCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCC‑‑CGCGAaga < 3:83793/149‑1 (MQ=255) cgcCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCACTAGCCGAACGCAAG‑AAGGCTGCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCC‑‑CGCGAaga < 5:13022/149‑1 (MQ=255) gcCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAG‑AAGGCTGCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGGCAAGGC‑‑CGCGAagag < 5:58332/149‑1 (MQ=38) gcCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAG‑AAGGCTGCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCC‑‑CGCGAagag < 2:69553/149‑1 (MQ=255) gcCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAG‑AAGGCTGCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCC‑‑CGCGAagag < 7:108256/149‑1 (MQ=255) aGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAG‑AAGGCTGCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCC‑‑CGCGAAGAGGcc > 4:87251/1‑149 (MQ=255) cacCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAG‑AAGGCTGCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCC‑‑CGCGAAGAGGCCGGcaca < 6:344767/148‑1 (MQ=255) acCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAG‑AAGGCTGCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGGCAAGGC‑‑CGCGaa < 8:145575/135‑1 (MQ=38) acCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAG‑AAGGCTGCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGGCAAGGC‑‑CGCGaa > 7:145575/1‑135 (MQ=38) ccGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAG‑AAGGCTGCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGGCAAGGC‑‑CGCGAagag > 5:356868/1‑137 (MQ=38) ccGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAG‑AAGGCTGCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGGCAAGGC‑‑CGCGAagag < 6:356868/137‑1 (MQ=38) aGACGCGCGAAATCGTGGCCGTTAAACCCCCCACTAACGCGGCAGTCCCCCAACCCAAC‑ACGGGTGCCCGCGGGCAG‑CTTTTTTTATTTGGCCTGGGCCGGCCTCTTCGCGGCCTTGCC‑‑CGCGAAGAGGCCGGCACAGACACCACaaaa < 2:351734/149‑1 (MQ=255) aGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAG‑AAGGCTGCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGGCAAGGC‑‑CGCGAAGAGGc > 6:374177/1‑130 (MQ=37) aGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAG‑AAGGCTGCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGGCAAGGC‑‑CGCGAAGAGGc < 5:374177/130‑1 (MQ=37) gAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAG‑AAGGCTGCCCTCGGGCAGCCTTTTTTT‑TTTGTCCTGTGCCGGCCTCTTCGCGGCCATGCC‑‑CGCGAAGCGGCCGGCCCCGACACCCCAAAAc > 3:74225/1‑149 (MQ=255) cgcgACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAG‑AAGGCTGCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCC‑‑CGCGAAGAGGCCGGCACAGACACCACAAAACCt > 5:419855/1‑147 (MQ=255) gACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAG‑AAGGCTGCCCTCGGACAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCC‑‑CGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGtt > 1:328995/1‑149 (MQ=255) tCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAG‑AAGGCTGCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGGCAAGGC‑‑CGCGAaga > 1:386189/1‑115 (MQ=37) tCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAG‑AAGGCTGCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGGCAAGGC‑‑CGCGAaga < 2:386189/115‑1 (MQ=37) ccTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAG‑AAGGCTGCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTTCC‑‑CGCGAAGAGGCCGGCACAGACACCACAAAACCACAGATTTTATccgccc > 8:161000/1‑149 (MQ=255) gAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAG‑AAGGCTGCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCC‑‑CGCGAAGAGGCCGGCACAGACACCACAAAAc > 6:195303/1‑128 (MQ=39) gAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAG‑AAGGCTGCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCC‑‑CGCGAAGAGGCCGGCACAGACACCACAAAAc < 5:195303/128‑1 (MQ=39) aGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAG‑AAGGCTGCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGGGCCGGCCTCTTCGCGGCCTTGCC‑‑CGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCAc < 7:161000/149‑1 (MQ=255) gCTGCAGTAGCCGAACGCAAG‑AAGGCTGCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCC‑‑CGCGAAGAGCCCCGCACAGACCCCACAAAACCTCac > 5:420508/1‑116 (MQ=255) tGCAGTAGCCGAACGCAAG‑AAGGCTGCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCC‑‑CGCGAAGAGGCCGGGCCAGCCACCACAAACCCTCAGTTTTTCTCCGCCCCCTCACGCAGCCCTGTAAggg > 3:300727/1‑149 (MQ=255) gCAGTAGCCGAACGCAAG‑AAGGCTGCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCCGCCTTGCC‑‑CGCGAAGAGGCCGGCACAGCCACCCCAAAACCTCAGTTTTTATCCCCCCGCTCACGCAGCCCGTTCAggg > 6:157603/1‑148 (MQ=255) gTAGCCGAACGCAAG‑AAGGCTGCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCC‑‑CGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTAtt < 6:419855/149‑1 (MQ=255) aGCCGAACGCAAG‑AAGGCTGCCCTCGGGCATCC‑TTTTTTATTTGTCCTGTGCCGGCATCTTCGCGGCCTTGCCCTCGCTATGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTAtt < 1:126550/149‑1 (MQ=255) gAACGCAAG‑AAGGCTGCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTAGCGGCCTTGCC‑‑CGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCGCACGCAGCCCGTTCAGGGAATTGAACgg > 5:374007/1‑149 (MQ=255) gAACGCAAG‑AAGGCTGCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCACATAGCGGGCATGGC‑‑CGCGAATAGGGCGGGCCCGAAAACCCAAAACCACACTTTTTATACCCCCCCGCACCCCCCCCGTTAAAGGTATTTAAAgg > 2:340994/1‑149 (MQ=255) aaCGCAAG‑AAGGCTGCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTGGCGGCCTTGCC‑‑CGCGATGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGgc < 7:348315/149‑1 (MQ=255) taaaaaagGCTGCCCGAGGGCAGCC‑TTCTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCC‑‑CGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCa < 2:95878/144‑1 (MQ=255) aag‑aagGCTGCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCC‑‑CGCGAAGAGGCCGGCACAGACACCACAAAACCACAGTTTTTATACGCCCGCTCACGCAGCCCTTTCAGGGTATTTAACGGCGCATc > 6:363325/1‑149 (MQ=255) agGCTGCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCC‑‑CGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCa < 6:169664/126‑1 (MQ=39) agGCTGCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCC‑‑CGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCa > 5:169664/1‑126 (MQ=39) gcggCCCTCGGGAAG‑CTTTTTTTATTTGGCCTGGGCCGGCCTCTTCGCGGCCTTGCC‑‑CGCTAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCcaccac < 6:374007/146‑1 (MQ=255) cccTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCC‑‑CGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAATGGCGCATCCACCACGAAc > 6:179483/1‑149 (MQ=255) cTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCC‑‑CGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAATGGCGCATCCACCACGAACtt < 5:179483/149‑1 (MQ=255) ctatctgCCTTTTTTT‑TTTGTCCTGTGCGGGCCTCTTCGCGGCCTTGCC‑‑CGGGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGTTATTGAACGGCTCATCCACCACGAACttg < 1:263214/142‑1 (MQ=255) ggCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCC‑‑CGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACttgttg < 2:63652/149‑1 (MQ=255) ttttATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCC‑‑CGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATc > 1:308012/1‑149 (MQ=255) tgTGCCGGCCTCTTCGCGGCCTTGCC‑‑CGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTa > 5:300724/2‑149 (MQ=255) tGCCGGCCTCTTCGCGGCCTTGCC‑‑CGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTac < 6:406545/148‑1 (MQ=255) ccGGCCTCTACGCGGCCTTGCC‑‑CGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACTGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTaccac < 7:192418/149‑1 (MQ=255) cgcccTCTTCGCGGCCTGCCC‑‑CGCGATGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTaccacc < 3:87251/146‑1 (MQ=255) tctTCGCGGGCAAGGC‑‑CGCGAAGAGGCCGGCACAGACCCCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGCACTTGTTGGACACCATCACCGGCAAGCTACCACCTGGCt > 1:168214/1‑149 (MQ=255) tctTCGCGGCCTTGCC‑‑CGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCCGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCt > 3:311544/1‑149 (MQ=255) tctTCGCGGCCTTGCC‑‑CGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCt > 5:156556/1‑149 (MQ=255) ctTCGCGGGCAAGGC‑‑CGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTac > 4:100715/1‑139 (MQ=255) ctTCGCGGGCAAGGC‑‑CGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTac < 3:100715/139‑1 (MQ=255) ctTCGCGGCCTTGCC‑‑CGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTc > 1:268226/1‑149 (MQ=255) ttCGCGGCCTTGCC‑‑CGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTg > 3:332430/1‑144 (MQ=255) ttCGCGGCCTTGCC‑‑CGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTg < 4:332430/144‑1 (MQ=255) ttCGCGGCCTTGCC‑‑CGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCg > 3:285681/1‑149 (MQ=255) cgcgGCCTTGCC‑‑CGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCg < 4:300727/147‑1 (MQ=255) gcgGCCTTGCC‑‑CGCGAAGAGGCCGGCACAGACACCACAATACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCGgt < 1:340994/148‑1 (MQ=255) gcgGCCTTGCC‑‑CGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCGgtg > 3:395375/1‑149 (MQ=255) gcgGCCTTGCC‑‑CGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCGgt < 5:363325/148‑1 (MQ=255) cgGCCTTGCC‑‑CGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTAt < 3:193144/83‑1 (MQ=255) cgGCCTTGCC‑‑CGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTAt > 4:193144/1‑83 (MQ=255) cTTGCC‑‑CGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCGGTGTGCAc > 3:380480/1‑149 (MQ=255) ttGCC‑‑CGCGAAGAGGCCTGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACtt < 5:256271/103‑1 (MQ=255) ttGCC‑‑CGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACtt > 6:256271/1‑103 (MQ=255) gCC‑‑CGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCGgtgt > 1:142118/1‑142 (MQ=255) gCC‑‑CGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCGgtgt < 2:142118/142‑1 (MQ=255) cc‑‑cGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCGGTGTGCACCTgg < 6:300724/149‑1 (MQ=255) | GGCCGTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAG‑AAGGCTGCCCTCGGGCAGCCTTTTTTTATTTTTCTGGTGCCGGCCTCTTCGCGGCCTTGCC‑‑CGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCGGTGTGCACCTGG > NC_002947/4740695‑4740992 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |