| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,998,171 | G→T | 10.5% | intergenic (‑71/‑145) | PP_4405 ← / → PP_4406 | sensory box protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,998,171 | 0 | G | T | 10.5% | 216.0 / 13.5 | 76 | intergenic (‑71/‑145) | PP_4405/PP_4406 | sensory box protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (33/35); new base T (4/4); total (37/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.45e-01 | |||||||||||
GCTGATCAAATCGAACAAGGTGTGCAATTGCTGTTCACTGAAGCCGGCAGGTACCGGCCTGGTGTCTTGACTCATG‑GACGCTCTCCCTGATGCCCAGCAACTGCGCTCCGATCAAGGGGCTGCCG‑‑‑ACAGTGGTGTTGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACCCACGTGCAACCGAAATAGTGCCAACGCCCTGATTTCGACCGGCACAGCGCTGGCATGGATTTTGCGCTTGGTACCTGCCAACGAGATTTCCAAGGAGGAAACA > NC_002947/4998026‑4998316 | gCTGATCAAATCGAACAAGGTGTGCAATTGCTGTTCACTGAAGCCGGCAGGTACCGGCCTGGTGTCTTGACTCATG‑GACGCTCTCCCTGATGCCCAGCAACTGCGCTCCGATCAAGGGGCTGCCG‑‑‑ACAGTGGTGTTGATTGCCGCGAGc < 2:278035/149‑1 (MQ=255) aaaTCGAACAAGGTGTGCAATTGCTGTTCACTGAAGCCGGCAGGTACCGGCCTGGTGTCTTGACTCATG‑GACGCTCTCCCTGATGCCCAGCAACTGCGCTCCGATCAAGGGGCTGCCG‑‑‑ACAGTGGTGTTGATTGCCGCTCGCGGCaatc < 3:344536/149‑3 (MQ=255) aaTCGAACAAGGTGTGCAATTGCTGTTCACTGAAGCCGGCAGGTACCGGCCTGGTGTCTTGACTCATG‑GACGCTCTCCCTGATGCCCAGCAACTGCGCTCCGATCAAGGGGCTGCCG‑‑‑ACAGTGGTGTTGATTGCCTCTCGCGGCaatc > 1:371800/1‑146 (MQ=255) aaTCGAACAAGGTGTGCAATTGCTGTTCACTGAAGCCGGCAGGTACCGGCCTGGTGTCTTGACTCATG‑GACGCTCTCCCTGATGCCCAGCAACTGCGCTCCGATCAAGGGGCTGCCG‑‑‑ACAGTGGTGTTGATTGCCTCTCGCGGCaatc < 2:371800/148‑3 (MQ=255) aTCGAACAAGGTGTGCAATTGCTGTTCACTGAAGCCGGCAGGTACCGGCCTGGTGTCTTGACTCATG‑GACGCTCTCCCTGATGCCCAGCAACTGCGCTCCGATCAAGGGGCTGCCG‑‑‑ACAGTGGTGTTGATTGCCGCGAGCGGCAAgat > 7:287660/1‑148 (MQ=255) gAACAAGGTGTGCAATTGCTGTTCACTGAAGCCGGCAGGTACCGGCCTGGTGTCTTGACTCATG‑GACGCTCTCCCTGATGCCCAGCAACTGCGCTCCGATCAAGGGGCTGCCG‑‑‑ACAGTGGTGTTGATTGCCGCGAGCGGCAAGatgatg > 6:155413/1‑149 (MQ=255) aaCAAGGTGTGCAATTGCTGTTCACTGAAGCCGGCAGGTACCGGCCTGGTGTCTTGACTCATG‑GACGCTCTCCCTGATGCCCAGCAACTGCGCTCCGATCAAGGGGCTGCCG‑‑‑ACAGTGGTGTTGATTGCCGCGAGCGGCAAGATGATGc < 1:193132/149‑1 (MQ=255) gtgCAATTGCTGTTCACTGAAGCCGGCAGGTACCGGCCTGGTGTCTTGACTCATG‑GACGCTCTCCCTGATGCCCAGCAACTGCGCTCCGATCAAGGGGCTGCCG‑‑‑ACAGTGGTGTTGATTGCCGCGAGCGGCAAGATGATGCCTATCACg > 8:256819/1‑149 (MQ=255) aaTTGCTGTTCACTGAAGCCGGCTGGTACCGGCCTGGTGTCTTGACTCATGCTATGCTCTCCCTATTGCCCTGCAACTGCGCTCCGATCAAGGGGCTGCCG‑‑‑ACAGTGGTGTTGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGc < 1:132142/149‑1 (MQ=255) gCTGTTCACTGAAGCCGGCAGGTACCGGCCTGGTGTCTTGACTCATG‑GACGCTCTCCCTGATGCCCAGCAACTGCGCTCCGATCAAGGGGCTGCCG‑‑‑ACAGTGGTGTTGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCAAGc < 1:181168/148‑1 (MQ=255) ttCACTGAAGCCGGCAGGTACCGGCCTGGTGTCTTGACTCATG‑GACGCTCTCCCTGATGCCCAGCAACTGCGCTCCGATCAAGGGGCTGCCG‑‑‑ACAGTGGTGTTGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCatat < 5:410022/148‑1 (MQ=255) ttCACTGAAGCCGGCAGGTACCGGCCTGGTGTCTTGACTCATG‑GACGCTCTCCCTGATGCCCAGCAACTGCGCTCCGATCAAGGGGCTGCCG‑‑‑ACAGTGGTGTTGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCATATg > 2:367138/1‑149 (MQ=255) tCACTGAAGCCGGCAGGTACCGGCCTGGTGTCTTGACTCATG‑GACGCTCTCCCTGATGCCCAGCAACTGCGCTCCGATCAAGGGGCTGCAG‑‑‑ACAGTGGTGTTGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCatatcc > 1:64038/1‑147 (MQ=255) cACTGAAGCCGGCAGGTACCGGCCTGGTGTCTTGACTCATG‑GACGCTCTCCCTGATGCCCAGCAACTGCGCTCCGATCAAGGGGCTGCCG‑‑‑ACAGTGGTGTTGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCATATGc < 2:11952/148‑1 (MQ=255) aCTGAAGCCGGCAGGTACCGGCCTGGTGTCTTGACTCATG‑GACGCTCTCCCTGATGCCCAGCAACTGCGCTCCGATCAAGGGGCTGCCG‑‑‑ACAGTGGTGTTGATTGCCGCTCGCGGCaatc < 1:76621/120‑3 (MQ=255) aCTGAAGCCGGCAGGTACCGGCCTGGTGTCTTGACTCATG‑GACGCTCTCCCTGATGCCCAGCAACTGCGCTCCGATCAAGGGGCTGCCG‑‑‑ACAGTGGTGTTGATTGCCGCTCGCGGCaatc > 2:76621/1‑118 (MQ=255) aCTGAAGCCGGCAGGTACCGGCCTGGTGTCTTGACTCATG‑GACGCTCTCCCTGATGCCCAGCAACTGCGCTCCGATCAAGGGGCTGCCG‑‑‑ACAGTGGTGTTGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCATATGccc > 6:29883/1‑149 (MQ=255) cGGCAGGTACCGGCCTGGTGTCTTGACTCATG‑GACGCTCTCCCTGATGCCCAGCAACTGCGCTCCGATCAAGGGGCTGCCG‑‑‑ACAGTGGTGTTGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACCCACGt < 3:183613/149‑1 (MQ=255) cGGCAGGTACCGGCCTGGTGTCTTGACTCATG‑GACGCTCTCCCTGATGCCCAGCAACTGCGCTCCGATCAAGGGGCTGCCG‑‑‑ACAGTGGTGTTGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACCCACGt < 2:64038/149‑1 (MQ=255) ggCCTGGTGTCTTGACTCATG‑GACGCTCTCCCTGATGCCCAGCAACTGCGCTCCGATCAAGGGGCTGAGGAGCACAGTGGTGTTGATTACCGCGCGCGGCAAGATGATGCATATCACGGGAAAGCATATCCCCACCCACGTGAAAcca > 1:126904/1‑147 (MQ=255) gtgtCTTGACTCATG‑GACGCTCTCCCTGATGCCCAGCAACTGCGCTCCGATCAAGGGGCTGCCG‑‑‑ACAGTGGTGTTGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACCCACGTGCaa < 4:365987/136‑1 (MQ=255) gtgtCTTGACTCATG‑GACGCTCTCCCTGATGCCCAGCAACTGCGCTCCGATCAAGGGGCTGCCG‑‑‑ACAGTGGTGTTGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACCCACGTGCaa > 3:365987/1‑136 (MQ=255) gtgtCTTGACTCATG‑GACGCTCTCCCTGATGCCCAGCAACTGCGCTCCGATCAAGGGGCTGCCG‑‑‑ACAGTGGTGTTGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACCCACGTGCAACCGAAATAGTGc > 6:57956/1‑148 (MQ=255) cTTGACTCATG‑GACGCTCTCCCTTATGCCCAGCAACTGCGCTCCGATCAAGGGGCTGCCG‑‑‑ACAGTGGTGTTGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACCCACGTGCAACCGAAATAGTGCCAAc < 4:23224/148‑1 (MQ=255) ttGACTCATG‑GACGCTCTCCCTGATGCCCAGCAACTGCGCTCCGATCAAGGGGCTGCCG‑‑‑ACAGTGGTGTTGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCaa < 4:346542/109‑1 (MQ=255) ttGACTCATG‑GACGCTCTCCCTGATGCCCAGCAACTGCGCTCCGATCAAGGGGCTGCCG‑‑‑ACAGTGGTGTTGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCaa > 3:346542/1‑109 (MQ=255) aCTCATG‑GACGCTCTCCCTGATGCCCAGCAACTGCGCTCCGATCAAGGGGCTGCCG‑‑‑ACAGTGGTGTTGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACCCACGTGCAACCGAAATAGTGCCAACGccc < 5:57956/148‑1 (MQ=255) aCTCATG‑GACGCTCTCCCTGATGCCCAGCAACTGCGCTCCGATCAAGGGGCTGCCG‑‑‑ACAGTGGTGTTGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACCCACGTGCAACCGAAATAGTGCCAACGCCCt < 5:154110/149‑1 (MQ=255) aTG‑GACGCTCTCCCTGATGCCCAGCAACTGCGCTCCGATCAAGGGGCTGCCG‑‑‑ACAGTGGTGTTGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACCCACGTGCAACCGAAATAGTGCTAACGCCCTGAtt > 1:5017/1‑149 (MQ=255) aTG‑GACGCTCTCCCTGATGCCCAGCAACTGCGCTCCGATCAAGGGGCTGCCG‑‑‑ACAGTGGTGTTGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACCCACGTGCAACCGAAATAGTGCCa < 3:258538/138‑1 (MQ=255) aTG‑GACGCTCTCCCTGATGCCCAGCAACTGCGCTCCGATCAAGGGGCTGCCG‑‑‑ACAGTGGTGTTGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACCCACGTGCAACCGAAATAGTGCCa > 4:258538/1‑138 (MQ=255) aTG‑GACGCTCTCCCTGATGCCCAGCAACTGCGCTCCGATCAAGGGGCTGCCG‑‑‑ACAGTGGTGTTGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACCCACGTGCAACCGAAATAGTGCCAACGCCCTGa < 5:29883/147‑1 (MQ=255) gACGCTCTCCCTGATGCCCAGCAACTGCGCTCCGATCAAGGGGCTGCCG‑‑‑ACAGTGGTGTTGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACCCACGTGCAACCGAAATAGTGCCAACGCCCTGATTTc < 7:201388/148‑1 (MQ=255) aCGCTCTCCCTGATGCCCAGCAACTGCGCTCCGATCAAGGGGCTGCCG‑‑‑ACAGTGGTGTTGATTGCCGCGAGCGGCAAGATGATGCCTATCACgg > 2:50302/1‑94 (MQ=255) cGCTCTCCCTGATGCCCAGCAACTGCGCTCCGATCAAGGGGCTGCCG‑‑‑ACAGTGGTGTTGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACCCACGTGCAACCGAAATAGTGCCAACGCCCTGATTTCGAc < 8:287660/149‑1 (MQ=255) ccTGATGCCCAGCAACTGCGCTCCGATCAAGGGGCTGCCG‑‑‑ACAGTGGTGTTGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACCCACGTGCAACCGAAATAGTGCCAACGCCCTGATTTCGACCGGcaca > 1:396209/1‑149 (MQ=255) ccTGATGCCCAGCAACTGCGCGCCGATCTCGGGGCTGCCG‑‑‑ACAGTGGTGTTGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACCCACGTGCAACCGAAATAGTGCCAACGCCCTGATTTCGACCGGcac < 6:349934/148‑1 (MQ=255) tGATGCCCAGCAACTGCGCTCCGATCAAGGGGCTGCCG‑‑‑ACAGTGGTGTTGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACCCACGTGCAACCGAAATAGTGCCAACGCCCTGATTTCGACCGGCACAgc > 1:383460/1‑149 (MQ=255) ccAGCAACTGCGCTCCGATCAAGGGGCTGCCG‑‑‑ACAGTGGTGTTGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACCCACGTGTAACCGAAATAGTGCCAACGCCCTGATTTCGACCGGCACAGCGCTgg > 6:225509/1‑148 (MQ=255) ccAGCAACTGCGCTCCGATCAAGGGGCTGCCG‑‑‑ACAGTGGTGTTGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACCCACGTGCAACCGAAATAGTGCCAACGCCCTGATTTCGACCGGCACAGCGCTgg > 8:111111/1‑148 (MQ=255) cAGCAACTGCGCTCCGATCAAGGGGCTGCCG‑‑‑ACAGTGGTGTTGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACCCACGTGCAACCGAAATAGTGCCAACGCCCTGATTTCGACCGGCACAGCGCTGGCa > 4:21621/1‑149 (MQ=255) aGCAACTGCGCTCCGATCAAGGGGCTGCCG‑‑‑ACAGTGGTGTTGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACCCACGTGCAACCGAAATAGt < 3:54245/112‑1 (MQ=255) aGCAACTGCGCTCCGATCAAGGGGCTGCCG‑‑‑ACAGTGGTGTTGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACCCACGTGCAACCGAAATAGt > 4:54245/1‑112 (MQ=255) cTGCGCTCCGATCAAGGGGCTGCCG‑‑‑ACAGTGGTGTTGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACCCACGTGCAACCGAAATAGTGCCAACGCCCTGATTTCGACCGGCACAGCGCTGGCATGGAtt < 2:383460/149‑1 (MQ=255) tGCGCTCCGATCAAGGGGCTGCCG‑‑‑ACAGTGGTGTTGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACCCACGTGCAACCGAAATAGTGCCAACGCCCTGATTTCGACCGGCACAGCGCTGGCATGGAttt > 8:185992/1‑149 (MQ=255) tGCGCTCCGATCAAGGGGCTGCCG‑‑‑ACAGTGGTGTTGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACACACGTGCAACCGAAATAGTGCCAACGCCCTGATTTCGACCGGCACAGCGCTGGCATGGAttt > 4:14905/1‑149 (MQ=255) tCCGATCAAGGGGCTGCCG‑‑‑ACAGTGGTGTTGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACCCACGTGCAACCGAAATAGTGCCAACGCCCTGATTTCGACCGGCACAGCGCTg < 7:44537/134‑1 (MQ=255) tCCGATCAAGGGGCTGCCG‑‑‑ACAGTGGTGTTGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACCCACGTGCAACCGAAATAGTGCCAACGCCCTGATTTCGACCGGCACAGCGCTg > 8:44537/1‑134 (MQ=255) tCCGATCAAGGGGCTGCCG‑‑‑ACAGTGGTGTTGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACCCACGTGCAACCGAAATAGTGCCAACGCCCTGATTTCGACCGGCACAGCGCTGGCATGGATTTTgcgc > 7:21306/1‑149 (MQ=255) cGATCAAGGGGCTGCCG‑‑‑ACAGTGGTGTTGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACCCACGTGCAACCGAAATAGTGCCAACGCCCTGATTTCGACCGGCACAGCGCTGGCATGGATTTTGCGCtt > 5:97402/1‑149 (MQ=255) cGATCAAGGGGCTGCCG‑‑‑ACAGTGGTGTTGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACCCACGTGCAACCGAAATAGTGCCAACGCCCTGATTTCGACCGGCACAGCGCTGGCATGGATTTTGCGCt < 1:367138/148‑1 (MQ=255) gATCAAGGGGCTGCCG‑‑‑ACAGTGGTGTTGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACCCACGTGCAACCGAAATAGTGCCAACGCCCTGATTTCGACCGGCACAGCGCTGGCATGGATTTTGCGCTTg < 5:155413/149‑1 (MQ=255) gATCAAGGCGCTGCCG‑‑‑ACAGTGGTGTTGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACCCACGTGCAACCGAAATAGTGCCAACGCCCTGATTTCGACCTGCACAGCGCTGGCATGGATTTTGCGCTTg > 8:215931/1‑149 (MQ=255) aaGGGGCTGCCG‑‑‑ACAGTGGTGTTGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACCCACGTGCAACCGAAATAGTGCCAACGCCCTGATTTCGACCGGCACAGCGCTGGCATGGATTTTGCGCTTGGTa < 3:386605/148‑1 (MQ=255) gggCTGCCG‑‑‑ACAGTGGTGTTGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACCCACGTGCAACCGAAATAGTGCCAACGCCCTGATTTCGACCGGCACAGCGCTGGCATGGATTTTGCGCTTGGTACCTg < 6:379496/149‑1 (MQ=255) gCTGCCG‑‑‑ACAGTGGTGTTGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACCCACGTGCAACCGAAATAGTGCCAACGCCCTGATTTCGACCGGCACAGCGCTGGCATGGATTTTGCGCTTGGTACCTGcc < 3:14905/149‑1 (MQ=255) cG‑‑‑ACAGTGGTGTTGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACCCACGTGTAACCGAAATAGTGCCAACGCCCTGATTTCGACCGGCACAGCGCTGGCATGGATTTTGCGCTTGGTACCTGCCAACga < 5:225509/149‑1 (MQ=255) cG‑‑‑ACAGTGGTGTTGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACCCACGTGCAACCGAAATAGTGCCAACGCCCTGATTTCGACCGGCACAGCGCTGGCATGGATTTTGCGCTTg > 8:298526/1‑135 (MQ=255) cG‑‑‑ACAGTGGTGTTGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACCCACGTGCAACCGAAATAGTGCCAACGCCCTGATTTCGACCGGCACAGCGCTGGCATGGATTTTGCGCTTg < 7:298526/135‑1 (MQ=255) cG‑‑‑ACAGTGGTGTTGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACCCACGTGCAACCGAAATAGTGCCAACGCCCTGATTTCGACCGGCACAGCGCTGGCATGGATTTTGCGCTTGGTACCTGCCAACga < 7:256819/149‑1 (MQ=255) aCAGTGGTGTTGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACCCACGTGCAACCGAAATAGTGCCAACGCCCTGATTTCGACCGGCACAGCGCTGGCATGGATTTTGCGCTTGGTACCTGCCAAc > 1:64778/1‑145 (MQ=255) tggtgTTGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACCCACGTGCAACCGAAATAGTGCCAACGCCCTGATTTCGAc < 4:279583/98‑1 (MQ=255) tggtgTTGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACCCACGTGCAACCGAAATAGTGCCAACGCCCTGATTTCGAc > 3:279583/1‑98 (MQ=255) tggtgTTGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACCCACGTGCAACCGAAATAGTGCCAACGCCCTGATTTCGACCGGCACAGCGCTGGCATGGATTTTGCGCTTGGTACCTGCGATCGAGATTTc > 7:271818/1‑149 (MQ=255) tggtgTTGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACCCACGTGCAACCGAAATAGTGCCAACGCCCTGATTTCGACCGGCACAGCGCTGGCATGGATTTTGCGCTTGGTACCTGCCAACGAGATTTc > 3:245488/1‑149 (MQ=255) atcatcttGCCGCTCGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACCCACGTGCAACCGAAATAGTGCCAACGCCCTGATTTCGACCGGCACAGCGCTGGCATGGATTTTGCGCTTGGTACCTGCCAACGAGATTTcc > 7:111050/7‑147 (MQ=255) tcatcttGCCGCTCGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACCCACGTGCAACCGAAATAGTGCCAACGCCCTGATTTCGACCGGCACAGCGCTGGCATGGATTTTGCGCTTGGTACCTGCCAACGAGATTTCCAag < 8:111050/144‑1 (MQ=255) ttGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACCCACGTGCAACCGAAATAGTGCCAACGCCCTGATTTCGACCGGCACAGCGGTGGCATGGATTTTGCGCTTGGTACCTGCCAACGAGATTTCCAagg < 1:288834/149‑1 (MQ=255) ttGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACCCACGTGCAACCGAAATAGTGCCAACGCCCTGATTTCGACCGGCACAGCGCTGGCATGGATTTTGCGCTTGGTACCTGCCAACGAGATTTCCAagg < 6:97402/149‑1 (MQ=255) ttGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACCCACGTGCAACCGAAATAGTGCCAACGCCCTGATTTCGACCGGCACAGCGCTGGCATGGATTTTGCGCTTGGTACCTGCCAACGAGATTTCCAag > 4:359278/1‑148 (MQ=255) tcttGCCGCTCGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACCCACGTGCAACCGAAATAGTGCCAACGCCCTGATTTCGACCGGCACAGCGCTGGCATGGATTTTGCGCTTGGTACCTGCCAACGAGATTTCCAaggag > 2:86399/3‑149 (MQ=255) aTTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACCCACGTGCAACCGAAATAGTGCCAACGCCCTGATTTCGACCGGCACAGCGCTGGCATGGATTTTGCGCTTGGTACCTGCCAACGAGATTTCCAaggagg < 1:169920/149‑1 (MQ=255) ttGCCGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACCCACGTGCAACCGAAATAGTGCCAACGCCCTGATTTCGACCGGCACAGCGCTGGCATGGATTTTGCGCTTGGTACCTGCCAACGAGATTTCCAaggagg < 8:21306/148‑1 (MQ=255) ccGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACCCACGTGCAACCGAAATAGTGCCAACGCCCTGATTTCGACCGGCACAGCGCTGGCATGGATTTTGCGCTTGGTACCTGCCAACGAGATTTCCAAGGAGGaaa < 3:21621/148‑1 (MQ=255) ccGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACCCACGTGCAACCGAAATAGTGCCAACGCCCTGATTTCGACCGGCACAGCGCTGGCATGGATTTTGCGCTTGGTACCTGCCAACGAGATTTCCAAGGAGGaaa > 8:151754/1‑148 (MQ=255) ccGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACCCACGTGCAACCGAAATAGTGCCAACGCCCTGATTTCGACCGGCACAGCGCTGGCATGGATTTTGCGCTTGGTACCTGCCAACGAGATTTCCAAGGAGGaaa > 8:292037/1‑148 (MQ=255) cgcgAGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACCCACGTGCAACCGAAATAGTGCCAACGCCCTGATTTCGACCGGCACAGCGCTGGCATGGATTTTGCGCTTGGTACCTGCCAACGAGATTTCCAAGGAGGAAACa < 7:215931/149‑1 (MQ=255) | GCTGATCAAATCGAACAAGGTGTGCAATTGCTGTTCACTGAAGCCGGCAGGTACCGGCCTGGTGTCTTGACTCATG‑GACGCTCTCCCTGATGCCCAGCAACTGCGCTCCGATCAAGGGGCTGCCG‑‑‑ACAGTGGTGTTGATTGCCGCGAGCGGCAAGATGATGCCTATCACGGGCAAGCATATGCCCACCCACGTGCAACCGAAATAGTGCCAACGCCCTGATTTCGACCGGCACAGCGCTGGCATGGATTTTGCGCTTGGTACCTGCCAACGAGATTTCCAAGGAGGAAACA > NC_002947/4998026‑4998316 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |