| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 122,224 | G→T | 5.4% | intergenic (+34/+27) | katE → / ← PP_0116 | hydroperoxidase/putative lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 122,224 | 0 | G | T | 5.4% | 300.2 / 3.3 | 90 | intergenic (+34/+27) | katE/PP_0116 | hydroperoxidase/putative lipoprotein |
| Reads supporting (aligned to +/- strand): ref base G (42/43); new base T (3/2); total (45/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ACAAGGGGCTGTTGCTCGGGGATGAGCAGAAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCAATCTTGCGCACGCGCTTTTCCAGCAAAGTCTTCAGC > NC_002947/122078‑122371 | aCAAGGGGCTGTTGCTCGGGGATGAGCAGAAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATg > 5:144559/1‑147 (MQ=255) aaGGGGCTGTTGCTCGGGGATGAGCAGAAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAg > 1:114150/1‑148 (MQ=255) ggggCTGTTGCTCGGGGATGAGCAGAAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTATGAg > 8:306147/1‑149 (MQ=255) gggCTGTTGCTCGGGGATGAGCAGAAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGc > 6:393603/1‑149 (MQ=255) gCTGTTGCTCGGGGATGAGCAGAAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCgg > 5:316692/1‑149 (MQ=255) gCTGTTGCTCGGGGATGAGCAGAAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCgg < 6:183061/149‑1 (MQ=255) ttGCTCGGGGATGAGCAGAAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGtt < 8:101412/148‑1 (MQ=255) cTCGGGGATGAGCAGAAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCGCTCCTACATCAGGAGGGGGTTTAcc < 6:347958/149‑1 (MQ=38) tCGGGGATGAGCAGAAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTAccc < 7:65981/149‑1 (MQ=255) tCGGGGATGAGCAGAAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTAccc > 6:297106/1‑149 (MQ=255) ggggATGAGCAGAAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCGCTCCTACATCAGGAGGGGGTTTAcc < 6:186235/146‑1 (MQ=38) ggggATGAGCAGAAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCGCTCCTACATCAGGAGGGGGTTTAcc > 5:186235/1‑146 (MQ=38) ggggATGAGCAGAAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCcgc < 5:393603/149‑1 (MQ=255) gCAGAAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGTGTGGATGAGAAGGTTAAAACTGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGtt < 1:337983/149‑1 (MQ=255) cAGAAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGtt > 3:8382/1‑148 (MQ=255) gAAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTAc > 8:145820/1‑149 (MQ=255) aGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTActg < 7:375730/149‑1 (MQ=255) aGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTActg < 7:94184/149‑1 (MQ=255) ggCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGATCGGGTGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCTGGTAAACCCCCTCCTGATGTAGTAGCGGGTTTACCCGCTAAGCGTTTActtc < 7:356482/149‑3 (MQ=255) ggCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTActgc < 7:306147/149‑1 (MQ=255) aGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGc < 5:209653/137‑1 (MQ=255) aGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGc > 6:209653/1‑137 (MQ=255) aGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGa < 5:297106/149‑1 (MQ=255) gTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGAt < 2:114150/149‑1 (MQ=255) tGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCgg < 4:8382/148‑1 (MQ=255) ccTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGAc < 5:64285/149‑1 (MQ=255) gTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAg < 3:17948/147‑1 (MQ=255) gTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAg > 4:17948/1‑147 (MQ=255) tCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGcac > 8:119939/1‑149 (MQ=255) aaaGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGcacca > 4:91672/1‑149 (MQ=255) aaaGCGGTAGAACGCCACCGGGTGTGGGAGCGGGATGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCCGCTAAACACCCTCCTGATGTAGGAGCGGGATTACCATCGAAGCGTTTACTGCTGATGCGGGACCAGcacca > 4:294602/1‑149 (MQ=255) gCGGTAGAAGGCCAACGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGGTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCt < 6:316692/149‑1 (MQ=255) aaGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTAc < 8:43120/117‑1 (MQ=255) aaGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTAc > 7:43120/1‑117 (MQ=255) aaGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCgg < 4:352023/149‑1 (MQ=255) ggCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGc < 7:30749/124‑1 (MQ=255) ggCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGc > 8:30749/1‑124 (MQ=255) ccGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCagcgag < 7:119939/149‑1 (MQ=255) gggTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCagcgagcg < 3:91672/149‑1 (MQ=255) gtgGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTg > 4:314331/1‑148 (MQ=255) gggAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGAt > 1:383331/1‑149 (MQ=255) ggAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATc < 3:314331/149‑1 (MQ=255) gCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCt < 7:230728/123‑1 (MQ=255) gCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCt > 8:230728/1‑123 (MQ=255) cGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGAt < 6:144559/149‑1 (MQ=255) gggAGGCGGCGGCTTAAGCTGTTCCTGACTGACAAGGCCTTTTGGAGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCTAAGCGTTTAATGCTGATGCGGGACCAGCACCACCTGTTCCGGCAGCGAGCGCTGTATCTGAt < 5:200129/148‑1 (MQ=255) gggAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGAtg > 2:259415/1‑149 (MQ=255) ggcggctgcTGAAGGTGTTCCTGCCTGACAAGGCCTTTTCGCGTGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCAACACCTGTGCCGGCAGCGAGCGCTTGATCTGAtgcttc < 3:294602/149‑1 (MQ=255) ggcggcTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGAtgcttctgc > 1:245714/1‑149 (MQ=255) cTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAg > 5:111805/1‑149 (MQ=255) cTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAg > 4:379641/1‑149 (MQ=255) tGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGAtgcttctgc < 8:167719/143‑1 (MQ=255) tGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGAtgcttctgc > 7:167719/1‑143 (MQ=255) gAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCagc > 7:363236/1‑118 (MQ=255) gAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCagc < 8:363236/118‑1 (MQ=255) aaGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCt < 1:378013/148‑1 (MQ=255) cttttCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGAtgcttctgcttc < 1:188210/138‑1 (MQ=255) cTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTTAACCCCCTCCGGATTTATGAGCGGGTTTACCCGCGAAGCCTTTTCAGCAGATGACGGACCACGAACACCTGTGCCGGCAGCGAACGCTGGAACAGAAGCTTATGCTTCaagatcc > 2:188210/1‑142 (MQ=255) tgcctgACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGAtgc > 4:49182/1‑125 (MQ=255) tgcctgACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGAtgc < 3:49182/125‑1 (MQ=255) tgcctgACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTg > 3:24666/1‑149 (MQ=255) gcctgACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCgg > 7:173876/1‑49 (MQ=255) gcctgACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCgg < 8:173876/49‑1 (MQ=255) cctgACAAGGCCTTTTCGCGGGTAAA‑CCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTc > 8:360201/1‑148 (MQ=255) cctgACAAGGCCTTTTCGCGGGGAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGt < 7:152897/148‑1 (MQ=255) tgACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCaa > 3:43734/1‑149 (MQ=255) tgACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCa > 4:104421/1‑148 (MQ=255) aaGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCAATCtt > 6:33931/1‑149 (MQ=255) ggCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCAATCTTgc < 6:111805/149‑1 (MQ=255) gCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCAATCTTgc < 5:145842/148‑1 (MQ=255) gCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCAATCTTgc > 6:145842/1‑148 (MQ=255) cTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCAATCTTGCGCa > 8:194223/1‑149 (MQ=255) ttttCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCAATCTTGCGCAc > 8:206061/1‑149 (MQ=255) tCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCAATCTTGCGCAcgc < 3:104421/148‑1 (MQ=255) gcgGGTAAACCCGCTCCTACATCAGGAGGGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCAATCTTGCGCACGCGCt > 1:225657/1‑149 (MQ=38) gcgGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCAATCTTGCGCACGCGCt > 3:146569/1‑149 (MQ=255) tAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCAATCTTGCGCACGCGCTTTTcc < 1:259415/149‑1 (MQ=255) tAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCAATCTTGCGCACGCGCTTTTcc < 4:43734/149‑1 (MQ=255) tAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCAATCTTGCGCACGCGCTTTTc > 6:349262/1‑148 (MQ=255) aaaCCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCAATCTTGCGCACGCGCTTTTc > 5:281339/1‑147 (MQ=255) aaCCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCAATCTTGCGCACGCGCTTTTCCa < 2:383331/148‑1 (MQ=255) aCCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGAt > 4:349241/1‑96 (MQ=255) aCCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGAt < 3:349241/96‑1 (MQ=255) cccccTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCAATCTTGCGCACGCGCTTTTCCAGc > 5:372191/1‑148 (MQ=255) cccccTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCAATCTTGCGCACGCGCTTATCCAGc > 6:274278/1‑148 (MQ=255) ccccTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCAATCTTGCGCACGCGCTTTTCCa > 2:115915/1‑145 (MQ=255) ccccTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCAATCTTGCGCACGCGCTTTTCCa < 1:115915/145‑1 (MQ=255) cctcctGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTg > 2:29981/1‑118 (MQ=255) tGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGTTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCAATCTTGCGCACGCGCTTTTCCAGCAAAGTCtt > 2:50727/1‑148 (MQ=255) aTGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCAATCTTGCGCACGCGCTTTTCCAGCAAAGTCTTCa < 6:372191/148‑1 (MQ=255) aTGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCAATCTTGCGCACGCGCTTTTCCAGCAAAGTCTTCAg < 2:245714/149‑1 (MQ=255) gTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCAATCTTGCGCACGCGCTTTTCCAGCAAAGTCTTCAGc > 2:283712/1‑148 (MQ=255) | ACAAGGGGCTGTTGCTCGGGGATGAGCAGAAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCAATCTTGCGCACGCGCTTTTCCAGCAAAGTCTTCAGC > NC_002947/122078‑122371 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |