| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,070,513 | A→T | 5.6% | L125Q (CTG→CAG) | PP_4466 ← | TauD/TfdA family dioxygenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,070,513 | 0 | A | T | 5.6% | 283.3 / 4.8 | 89 | L125Q (CTG→CAG) | PP_4466 | TauD/TfdA family dioxygenase |
| Reads supporting (aligned to +/- strand): ref base A (43/41); new base T (2/3); total (45/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.77e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.40e-01 | |||||||||||
CTCCCGCCGCGTCATACACGCTCTGGAAGAAGATCTGCCGGCCTTTGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTTAGTAGTGTTAGCAATAACCAAAATTTCTTTTTGCGTTGGATGAG > NC_002947/5070370‑5070651 | cTCCCGCCGCGTCATACACGCTCTGGAAGAAGATCTGCCGGCCTTTGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGt > 2:307028/1‑149 (MQ=255)cTCCCGCCGCGTCATACACGCTCTGGAAGAAGATCTGCCGGCCTTTGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGt > 6:275827/1‑149 (MQ=255) ccgccgCGTCATACACGCTCTGGAAGAAGATCTGCCGGCCTTTGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCt > 6:99728/1‑149 (MQ=255) gcgTCTTACACGCGCTGGAAGATGATCTGCCGGCCTTTGACTGCGTCCAGTTGTTAGGACGGCAGGGGCTCGTATGCCTGATACATCGATAGGCAATAGGTGTCACGACCAGTGGGCGGTAGTGGAATGGAGCACTGCTGCGCTCCatt < 1:124610/149‑3 (MQ=255) tCATACACGCTCTGGAAGAAGATCTGCCGGCCTTTGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCtgg > 5:411506/1‑149 (MQ=255) tCATACACGCTCTGGAAGAAGATCTGCCGGCCTTTGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCACTGCTGCGCTCCattgca < 2:289697/149‑6 (MQ=255) acacGCTCTGGAAGAAGATCTGCCGGCCTTTGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGa > 5:45398/1‑149 (MQ=255) cacGCTCTGGAAGAAGATCTGCCGGCCTTTGACTGCTTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGa < 6:411506/148‑1 (MQ=255) tctGGAAGAAGATCTGCCGGCCTTTGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTg > 6:17339/1‑129 (MQ=255) tctGGAAGAAGATCTGCCGGCCTTTGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTg < 5:17339/129‑1 (MQ=255) tGGAAGAAGATCTGCCGGCCTTTGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCg > 5:368632/1‑147 (MQ=255) tGGAAGAAGATCTGCCGGCCTTTGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCg > 3:149557/1‑147 (MQ=255) gaagaaGATCTGCCGGCCTTTGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAg > 6:309694/1‑148 (MQ=255) aagaagATCTGCCGGCCTTTGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCACTGCTGCGCTCCat < 5:80116/130‑2 (MQ=255) aagaagATCTGCCGGCCTTTGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCACTGCTGCGCTCCat > 6:80116/1‑129 (MQ=255) gaagaTCTGCCGGCCTTTGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAAc > 2:105590/1‑148 (MQ=255) gaagaTCTGCCGGCCTTTGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAAc > 2:122983/1‑148 (MQ=255) agaTCTGCCGGCCTTTGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCa < 5:309694/148‑1 (MQ=255) agaTCTGCCGGCCTTTGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAg < 4:149557/149‑1 (MQ=255) cTGCCGGCCTTTGACTGCGTCCAGGAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGGCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTAt < 8:6953/149‑1 (MQ=255) tGCCGGCCTTTGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCgca > 3:310301/1‑109 (MQ=255) tGCCGGCCTTTGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCgca < 4:310301/109‑1 (MQ=255) gCCGGCCTTTGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCg > 2:401557/1‑149 (MQ=255) ccGGCCTTTGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCg < 3:170193/148‑1 (MQ=255) ccGGCCTTTGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCg < 1:122983/148‑1 (MQ=255) ggCCTTTGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGTTACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAg < 3:138999/117‑1 (MQ=255) gCCTTTGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGgtgt < 6:45398/149‑1 (MQ=255) gCCTTTGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGgtgt < 1:401557/149‑1 (MQ=255) tGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGcc < 5:155662/147‑1 (MQ=255) gACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAgg > 6:86793/1‑149 (MQ=255) cGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGtcgc < 5:86793/148‑1 (MQ=255) tCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGtcgcttc > 2:37631/1‑149 (MQ=255) tCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGtcgcttc < 1:105590/149‑1 (MQ=255) gTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAg > 1:386047/1‑116 (MQ=255) gTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAg < 2:386047/116‑1 (MQ=255) gTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTg > 3:387470/1‑149 (MQ=255) gATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTa < 3:297469/149‑1 (MQ=255) aCGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCaaa < 1:307028/149‑1 (MQ=255) ggCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAg > 5:274029/1‑148 (MQ=255) cAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCAc < 1:29233/149‑1 (MQ=255) gTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGa > 1:30997/1‑149 (MQ=255) gTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGa > 7:366524/1‑149 (MQ=255) gTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGa > 1:37126/1‑149 (MQ=255) gTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGa < 1:378500/149‑1 (MQ=255) tctcGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCACGTCGCTTCGCTGTTACCCAAAGCACCCGAt < 1:37631/149‑1 (MQ=255) tcGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATg > 8:70573/1‑148 (MQ=255) gTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATg < 7:70573/146‑1 (MQ=255) gTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCt > 7:174800/1‑149 (MQ=255) tAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCtt < 2:37126/149‑1 (MQ=255) tAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCtt < 2:30997/149‑1 (MQ=255) tAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCAAGGTCGCTTCGCTGATACCCAAAGCACCCGATGGCt > 8:268779/1‑148 (MQ=255) tGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTc > 8:43084/1‑149 (MQ=255) tACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCttt < 8:174800/149‑1 (MQ=255) tACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCtt > 1:395915/1‑148 (MQ=255) aCATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGTAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGgtgt < 8:208498/99‑1 (MQ=255) aCATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGTAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGgtgt > 7:208498/1‑99 (MQ=255) cATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGATACCCAAAGCACCCGATGGCTTACCGTCTTta < 7:268779/148‑1 (MQ=255) tCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTtagta < 5:99728/149‑1 (MQ=255) aCCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTTAGTAgtgt > 7:374743/1‑148 (MQ=255) cccAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTTAGTAGTGtt < 3:317177/148‑1 (MQ=255) ccAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTTAGTAGTGTTAg < 2:395915/149‑1 (MQ=255) ccAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTTAGTAGTGTTAg < 6:274029/149‑1 (MQ=255) ccAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTTAGTAGTGTTAg > 4:148160/1‑149 (MQ=255) cAATACGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTTAGTAGTGTTAGc < 3:6647/149‑1 (MQ=255) ggTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTTAGTAGTGTTAGCAATaa < 1:316681/149‑1 (MQ=255) gtgtCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTTAGTAGTGTTAGCAATAAc > 1:315494/1‑149 (MQ=255) ccaccaGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTTAGTAGTGTTAGc < 7:45054/137‑1 (MQ=255) ccaccaGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTTAGTAGTGTTAGc > 8:45054/1‑137 (MQ=255) ccaccaGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTTAGTAGTGTTAGCAATAACCAAAAt > 1:365416/1‑149 (MQ=255) ccaccaGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTTAGTAGTGTTAGCAATAACCAAAAt > 7:307383/1‑149 (MQ=255) caccaGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTTAGTAGTGTTAGCa < 1:352126/137‑1 (MQ=255) caccaGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTTAGTAGTGTTAGCa > 2:352126/1‑137 (MQ=255) caccaGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTTAGTAGTGTTAGCAATAACCAAAAtt > 3:8618/1‑149 (MQ=255) tGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTTAGTAGTGTTAGCAATAACCAAAATTTCtttt < 5:275827/149‑1 (MQ=255) tGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTTAGTAGTGTTAGCAATAACCAAAATTTCtttt > 3:352683/1‑149 (MQ=255) ggCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTTAGTAGTGTTAGCAATAACCAAAATTTCTTTTTg < 8:366524/149‑1 (MQ=255) gCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAGAGCACCCGATGGCTTACCGTCTTTAGTAGTGTTAGCAATAACCAAAATTTCTTTTTGc < 6:145366/149‑1 (MQ=255) gCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAGAGCACCCGATGGCTTACCGTCTTTAGTAGTGTTAGCAATAACCAAAATTTCTTTTTGc > 5:145366/1‑149 (MQ=255) gCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTTAGTAGTGTTAGCAATAACCAAAATTTCTTTTTGc > 3:210465/1‑149 (MQ=255) aaGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTTAGTAGTGTTAGCAATAACCAAAATTTCTTTTTGCGTTg < 3:148160/149‑1 (MQ=255) aGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTTAGTAGTGTTAGCAATAACCAAAATTTCTTTTTGCGTTgg < 7:43084/149‑1 (MQ=255) gTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTTAGTAGTGTTAGCAATAACCAAAATTTCTTTTTGCGTTGGa > 5:259661/1‑149 (MQ=255) tGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTta < 7:179161/109‑1 (MQ=255) tGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTta > 8:179161/1‑109 (MQ=255) tGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTTAGTAGTGTTAGCAATAACCAAAATTTCTTTTTGCGTTGGAt > 2:146016/1‑149 (MQ=255) cAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTtagtag < 6:109409/111‑1 (MQ=255) cAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTtagtag > 5:109409/1‑111 (MQ=255) gctGGAGCACTGCTGCGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTTAGTAGTGTTAGCAATAACCAAAATTTCTTTTTGCGTTGGATGAg > 2:136312/3‑149 (MQ=255) aaTGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTTAGTAGTGTTAGCAATAACCAAAATTTCTTTTTGCGTTGGATGAg > 4:258262/1‑149 (MQ=255) gAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTTAGTAGTGTTAGc > 4:41300/1‑113 (MQ=255) gAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTTAGTAGTGTTAGc < 3:41300/113‑1 (MQ=255) | CTCCCGCCGCGTCATACACGCTCTGGAAGAAGATCTGCCGGCCTTTGACTGCGTCCAGTAGATAGGACGGCAGGGTCTCGTAAGCCTGATACATCGATACCCAATAGGTGTCACCACCAGTGGGCGGAAGTGCAATGGAGCGCAGCAGTGCTCCAGCTGGTGGACGCTCGTAGAACCAGGTATCGGTGTGCCAGGTCGCTTCGCTGTTACCCAAAGCACCCGATGGCTTACCGTCTTTAGTAGTGTTAGCAATAACCAAAATTTCTTTTTGCGTTGGATGAG > NC_002947/5070370‑5070651 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |