| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,105,663 | T→C | 6.6% | S817G (AGC→GGC) | ydiJ ← | putative oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,105,663 | 0 | T | C | 6.6% | 222.6 / 4.4 | 76 | S817G (AGC→GGC) | ydiJ | putative oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base T (37/34); new base C (3/2); total (40/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.35e-01 | |||||||||||
GCGATACACCAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCGGGGTCAGCTCGCGCAGGGCC > NC_002947/5105517‑5105811 | gCGATACACCAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTg > 1:331736/1‑148 (MQ=255) gATACACCAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTa < 3:73111/148‑1 (MQ=255) gATACACCAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTa > 4:73111/1‑148 (MQ=255) acacCAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGgc > 5:106892/1‑149 (MQ=255) acCAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGgcgc < 2:331736/149‑1 (MQ=255) cAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGgcgc > 6:116259/1‑147 (MQ=255) aGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCATTCGGCCAGGTCCTTGAGCTGCGTGTCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAg < 7:190468/149‑1 (MQ=255) aGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAg < 6:83133/149‑1 (MQ=255) aTCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATAc > 2:66589/1‑149 (MQ=255) tCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATAcc > 8:154629/1‑149 (MQ=255) gCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATAccc < 4:321935/148‑1 (MQ=255) ccAGCCCCACCAGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATAccc < 6:354884/141‑1 (MQ=255) ccAGCCCCACCAGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATAccc > 5:354884/1‑141 (MQ=255) aGCCCCACCAGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAg > 5:275049/1‑149 (MQ=255) ccccACCAGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGCGCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAgg < 1:66589/149‑1 (MQ=255) caccaGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGt > 3:169103/1‑149 (MQ=255) accaGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTg > 5:212350/1‑149 (MQ=255) ccaGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTgg < 6:191851/149‑1 (MQ=255) ccaGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTgg < 3:87693/149‑1 (MQ=255) gCACACCGCAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCCGTACAGCGCCaacg > 4:407704/1‑117 (MQ=255) gCACACCGCAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCCGTACAGCGCCaacg < 3:407704/120‑4 (MQ=255) acCGCAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGa < 1:1693/149‑1 (MQ=255) cAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATg > 8:190395/1‑147 (MQ=255) cAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGaa < 7:306155/149‑1 (MQ=255) aaTCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAg > 5:295429/1‑149 (MQ=255) gCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGa > 6:173731/1‑149 (MQ=255) cTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTgg > 3:401136/1‑121 (MQ=255) cTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTgg < 4:401136/121‑1 (MQ=255) cTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAgcg < 6:106892/149‑1 (MQ=255) gCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGtt < 4:77291/149‑1 (MQ=255) gCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTc > 3:346210/1‑148 (MQ=255) cGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCg > 2:318319/1‑148 (MQ=255) gTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGaa < 6:295429/149‑1 (MQ=255) gTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGaa < 6:212350/149‑1 (MQ=255) gTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGc > 3:369011/1‑149 (MQ=255) tGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCgg < 7:154629/149‑1 (MQ=255) gCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGaa > 7:162906/1‑141 (MQ=255) gCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGaa < 8:162906/141‑1 (MQ=255) gCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCgg < 5:173731/148‑1 (MQ=255) cGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCggg < 4:346210/148‑1 (MQ=255) cGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAgg > 3:212826/1‑149 (MQ=255) cTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGc > 4:344073/1‑112 (MQ=255) cTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGCg < 7:190395/149‑1 (MQ=255) cTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGCg > 5:408917/1‑149 (MQ=255) ccTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGCGTcc > 7:95142/1‑149 (MQ=255) ccTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGCGTcc > 5:302593/1‑149 (MQ=255) ttGGCACACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGc < 2:209649/143‑1 (MQ=255) ttGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGc > 1:209649/1‑143 (MQ=255) ttGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGCGTCCTg > 8:237801/1‑149 (MQ=255) ggCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGCGTCCTg < 4:212826/147‑1 (MQ=255) gCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCgg < 7:77258/132‑1 (MQ=255) gCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCgg > 8:77258/1‑132 (MQ=255) aaGGAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGaa < 5:293521/90‑1 (MQ=255) aaGGAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGaa > 6:293521/1‑90 (MQ=255) ggAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGCGTCCTGCAcc < 7:361381/137‑1 (MQ=255) ggAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGCGTCCTGCAcc > 8:361381/1‑137 (MQ=255) gAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAgg < 2:108010/89‑1 (MQ=255) gAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAgg > 1:108010/1‑89 (MQ=255) gAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGt < 3:149640/120‑1 (MQ=255) gAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGt > 4:149640/1‑120 (MQ=255) gAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGaa < 4:129304/123‑1 (MQ=255) gAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGaa > 3:129304/1‑123 (MQ=255) ccTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGCGTCCTGCACCAGCACGATGCTGCGCTcg < 6:275049/149‑1 (MQ=255) ccTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGCGTCCTGCACCAGCACGATGCTGCGATct > 7:343335/1‑148 (MQ=255) gTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTggg > 1:248947/1‑149 (MQ=255) gCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGCGTCCTGc > 3:317176/1‑119 (MQ=255) gCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGCGTCCTGc < 4:317176/119‑1 (MQ=255) cAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCg > 8:225156/1‑149 (MQ=255) aCGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCggg < 3:289369/149‑1 (MQ=255) gTTG‑GCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGCGTc > 4:128901/1‑102 (MQ=255) gTTG‑GCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGCGTc < 3:128901/102‑1 (MQ=255) tG‑GCGCCGTACAGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTgg > 2:4977/1‑131 (MQ=255) tG‑GCGCCGTACAGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTgg < 1:4977/131‑1 (MQ=255) ctcgcgcCGTACAGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATCAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGAGAAGGCGTCCTGCACCAGCACGATGCTGCCCTCGCGCTGGGCCGGGGTCAGCTcgcg > 4:74792/4‑149 (MQ=255) gcgcTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCGGGGTCAGCTcgcg < 8:317787/146‑1 (MQ=255) gcgcTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCGGGGTCAGCTcgcg > 7:317787/1‑146 (MQ=255) tGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCGGGGTCAGCTCGCGCAGGGcc > 3:392638/1‑149 (MQ=255) | GCGATACACCAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTGCGTGGCGTTGCGGATCGCTGCCTTGGCAAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTG‑GCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCGGGGTCAGCTCGCGCAGGGCC > NC_002947/5105517‑5105811 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |