| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,291,245 | G→C | 5.4% | P281P (CCG→CCC) | PP_4664 → | LysR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,291,245 | 0 | G | C | 5.4% | 232.0 / 2.1 | 73 | P281P (CCG→CCC) | PP_4664 | LysR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base G (33/36); new base C (2/2); total (35/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.09e-01 | |||||||||||
TGGTCGCGGGCGGGGCCGGAATCGGGGTGGTGCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTG‑TCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAGCCCAGGCAACTGCGGCGCGGCCGTTGGGCC > NC_002947/5291097‑5291384 | tGGTCGCGGGCGGGGCCGGAATCGGGGTGGTGCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCg < 1:255120/149‑1 (MQ=255)gggTCGCGGGCGGGGCCGGAATCGGGGTGGTGCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCg < 7:221128/148‑1 (MQ=255) gTCGCGGGCGGGGCCGGAATCGGGGTGGTGCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCggg < 5:421901/149‑1 (MQ=255) gTCGCGGGCGGGGCCGGAATCGGGGTGGTGCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCgg < 4:177815/148‑1 (MQ=255) tCGCGGGCGGGGCCGGAATCGGGGTGGTGCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGc > 2:134536/1‑149 (MQ=255) cgcgGGCGGGGCCGGAATCGGGGTGGTGCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGc > 7:254473/1‑148 (MQ=255) cgggcgggGCCGGAATCGGGGTGGTGCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGCGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTAt < 6:425556/149‑1 (MQ=255) gcgggGCCGGAATCGGGGTGGTGCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGcc < 8:254473/149‑1 (MQ=255) ggCCGGAATCGGGGTGGTGCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAg < 5:108902/149‑1 (MQ=255) gCCGGAATCGGGGTGGTGCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAg > 3:190442/1‑148 (MQ=255) ccGGAATCGGGGTGGTGCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGaa > 1:27166/1‑149 (MQ=255) cGGAATCGGGGTGGTGCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAAc < 2:203270/149‑1 (MQ=255) cGGAATCGGGGTGGTGCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAAc > 1:186016/1‑149 (MQ=255) cGGAATCGGGGTGGTGCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAAc < 8:114583/149‑1 (MQ=255) ggAATCGGGGTGGTGCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACt < 7:325160/149‑1 (MQ=255) gAATCGGGGTGGTGCCACTGTCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTg > 5:342278/1‑149 (MQ=255) ggggTGGTGCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATAGCCCGGCAATGCCGCaaaatcc < 3:89456/144‑4 (MQ=255) ggggTGGTGCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATAGCCCGGCAATGCCGCaaaatcc > 4:89456/1‑141 (MQ=255) ggtggtGCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCa < 4:190442/149‑1 (MQ=255) gtggtgCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCAc < 4:199429/149‑1 (MQ=255) tgCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCAc < 2:102849/145‑1 (MQ=255) tgCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCAc > 1:102849/1‑145 (MQ=255) gCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCa > 4:287355/1‑143 (MQ=255) gCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCa < 3:287355/143‑1 (MQ=255) cACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTagc < 2:186016/149‑3 (MQ=255) cACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTAcc < 1:134536/149‑1 (MQ=255) aCTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCg > 3:222646/1‑149 (MQ=255) gcagcaGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGc < 1:244410/147‑1 (MQ=255) gcagcaGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCt < 8:374735/148‑1 (MQ=255) gcagTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCGACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCAGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGAcg > 7:57485/1‑149 (MQ=255) cagTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGAcgc < 2:27166/149‑1 (MQ=255) tACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACgcgc > 8:100786/1‑148 (MQ=255) aGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAgg > 5:299783/1‑149 (MQ=255) cgcTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGgc > 5:411986/1‑149 (MQ=255) cTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGgcgc < 1:383083/149‑1 (MQ=255) gCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGcaca > 2:273912/1‑149 (MQ=255) gCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATAGCCCGGCAATGCCg > 4:109743/1‑104 (MQ=255) gCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATAGCCCGGCAATGCCg < 3:109743/104‑1 (MQ=255) agtcATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCGATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCAcacca < 6:342278/146‑1 (MQ=255) aTGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCa < 3:233005/99‑1 (MQ=255) aTGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCa > 4:233005/1‑99 (MQ=255) gctgcCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTG‑Tc > 4:209810/1‑148 (MQ=255) tgcCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTG‑TCGAg > 8:328741/1‑149 (MQ=255) ccGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTG‑TCGAg < 7:100786/147‑1 (MQ=255) gTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGTGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTG‑TCGa > 1:248206/1‑144 (MQ=255) gTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGTGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTG‑TCGa < 2:248206/144‑1 (MQ=255) gTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTa < 1:562/100‑1 (MQ=255) gTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTa > 2:562/1‑100 (MQ=255) tGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTG‑TCGAGGCAAAc > 5:258630/1‑149 (MQ=255) gCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTG‑TCGAGGCAAAcc > 3:3061/1‑149 (MQ=255) ggTGGCACTGCAGGAGCCATGGGCCGACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTG‑TCGAGGCAAACCGCCt < 8:57485/147‑1 (MQ=255) tGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTG‑TCGAGGCAAACCGCCTGCCa > 8:264288/1‑149 (MQ=255) cACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTG‑TCGAGGCAAACCGCCTGCCATAg > 8:390411/1‑149 (MQ=255) cAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTG‑TCGAGGCAAACCGCCTGCCATAGcgcg < 4:325928/148‑1 (MQ=255) cAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTG‑TCGAGGCAAACCGCCTGCCATAGcgcg > 3:325928/1‑148 (MQ=255) ggAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTG‑TCGAGGCAAACCGCCTGCCATAGCGCGGGc < 8:304312/149‑1 (MQ=255) ggAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTG‑TCGAGGCAAACCGCCTGCCATAGCGCGGGc < 7:390411/149‑1 (MQ=255) atttgCCAACCGACGTTTGCTGGTGAGCGCACGGTATTTTGCGGCATTTCCGGGCTATGCCGAAGAACTGGTACCCACCTTTACAGGCTGACGCGCAAGGGCGCACACCACTG‑TCGAGGCAAACCGCCTGCCATAGCGCGTGCAGacac > 2:297638/5‑149 (MQ=255) tGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGacac < 1:273912/149‑1 (MQ=255) tGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTG‑TCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACAcc > 2:47254/1‑149 (MQ=255) ggCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTG‑TCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCt < 5:294189/148‑1 (MQ=255) gCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTG‑TCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTg > 8:282813/1‑148 (MQ=255) ccAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTG‑TCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGa > 2:168944/1‑149 (MQ=255) cAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTG‑TCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGAc > 5:233145/1‑149 (MQ=255) cgccgGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTG‑TCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCg < 7:282813/149‑1 (MQ=255) gTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTG‑TCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAGccc < 7:264288/149‑1 (MQ=255) gCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTG‑TCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAGCCCAg < 8:55016/148‑1 (MQ=255) tgtgCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTG‑TCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAGCCCAGGCAACt > 1:38590/1‑149 (MQ=255) gtgCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTG‑TCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAGCCCAGGCAACTg < 3:209810/149‑1 (MQ=255) gcgcACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTG‑TCGAGGCAAACCGCCTGc > 6:422343/1‑105 (MQ=255) gcgcACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTG‑TCGAGGCAAACCGCCTGc < 5:422343/105‑1 (MQ=255) cgcACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTG‑TCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAGCCCAGGCAACTgcgg < 4:222646/149‑1 (MQ=255) cgcACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTG‑TCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAGCCCAGGCAACTgcg < 7:328741/148‑1 (MQ=255) aCGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTG‑TCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAGCCCAGGCAACTgcggcgc > 2:45138/1‑149 (MQ=255) gggATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTG‑TCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAGCCCAGGCAACTgcggcgcgg < 6:258630/149‑1 (MQ=255) gCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTG‑TCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAGCCCAGGCAACTGCGGCGCGGCCGTTgg < 1:45138/148‑1 (MQ=255) ggCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTG‑TCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAGCCCAGGCAACTGCGGCGCGGCCGTTGGGcc > 5:60842/1‑149 (MQ=255) | TGGTCGCGGGCGGGGCCGGAATCGGGGTGGTGCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTG‑TCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAGCCCAGGCAACTGCGGCGCGGCCGTTGGGCC > NC_002947/5291097‑5291384 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |