| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,295,092 | A→G | 8.3% | T192A (ACG→GCG) | PP_4668 → | LysR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,295,092 | 0 | A | G | 8.3% | 197.5 / 7.3 | 72 | T192A (ACG→GCG) | PP_4668 | LysR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (29/37); new base G (4/2); total (33/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.03e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.60e-01 | |||||||||||
GCCTGTCCAAGCGTGAGGCGGACATCGTCATCGCGCTGGAGCGGCCCGAGCATGGGCCTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACGTGG‑‑ATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGATCCCCAACGCTAGCGCACATTTGCGCAGTACCAGCGTGATCGCGCAGTACACGGCAGCGCTGCAG > NC_002947/5294946‑5295238 | gCCTGTCCAAGCGTGAGGCGGACATCGTCATCGCGCTGGAGCGGCCCGAGCATGGGCCTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACg > 2:327571/1‑149 (MQ=255) cTGTCCAAGCGTGAGGCGGACATCGTCATCGCGCTGGAGCGGCCCGAGCATGGGCCTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGa > 4:221067/1‑149 (MQ=255) cAAGCGTGAGGCGGACATCGTCATCGCGCTGGAGCGGCCCGAGCATGGGCCTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTgg < 7:153089/149‑1 (MQ=255) cAAGCGTGAGGCGGACATCGTCATCGCGCTGGAGCGGCCCGAGCATGGGCCTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTgg > 5:11567/1‑149 (MQ=255) aaGCGTGAGGCGGACATCGTCATCGCGCTGGAGCGGCCCGAGCATGGGCCTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGc < 3:179601/149‑1 (MQ=255) gTGAGGCGGACATCGTCATCGCGCTGGAGCGGCCCGAGCATGGGCCTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCaaa < 5:318604/149‑1 (MQ=255) tGAGGCGGACATCGTCATCGCGCTGGAGCGGCCCGAGCATGGGCCTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGa > 5:279031/1‑134 (MQ=255) tGAGGCGGACATCGTCATCGCGCTGGAGCGGCCCGAGCATGGGCCTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGa < 6:279031/134‑1 (MQ=255) ggCGGACATCGTCATCGCGATGGAGCGGCCCGAGCATGGGCCTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGCACAGCCACGCCCCGATCCGCCAGGAGACGGATCTGGCCCAACAcc > 6:113813/1‑149 (MQ=255) gCGGACATCGTCATCGCGCTGGAGCGGCCCGAGCATGGGCCTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACAccc < 6:274570/149‑1 (MQ=255) ggACATCGTCATCGCGCTGGAGCGGCCCGAGCATGGGCCTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCt < 2:193496/149‑1 (MQ=255) ggACATCGTCACCGCGCTGGAGCGGCCCGAGCATGGGCCTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACAccc < 1:404747/147‑1 (MQ=255) ggACATCGTCACCGCGCTGGAGCGGCCCGAGCATGGGCCTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACAccc > 2:404747/1‑147 (MQ=255) gACATCGTCATCGCGCTGGAGCGGCCCGAGCATGGGCCTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCtt < 8:213953/149‑1 (MQ=255) aCATCGTCATCGCGCTGGAGCGGCCCGAGCATGGGCCTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTtc < 6:121073/149‑1 (MQ=255) aTCGTCATCGCGCTGGAGCGGCCCGAGCATGGGCCTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTGCCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTtcat < 6:396721/149‑1 (MQ=255) aTCGTCATCGCGCTGGAGCGGCCCGAGCATGGGCCTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATc < 6:212742/130‑1 (MQ=255) aTCGTCATCGCGCTGGAGCGGCCCGAGCATGGGCCTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATc > 5:212742/1‑130 (MQ=255) aTCGTCATCGCGCTGGAGCGGCCCGAGCATGGGCCTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTtcat > 5:118308/1‑149 (MQ=255) aTCGTCATCGCGCTGGAGCGGCCCGAGCATGGGCCTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTtcat < 2:74703/149‑1 (MQ=255) gTCATCGCGCTGGAGCGGCCCGAGCATGGGCCTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTtcatca < 6:11567/148‑1 (MQ=255) gTCATCGCGCTGGAGCGGCCCGAGCATGGGCCTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAg > 5:358226/1‑149 (MQ=255) aTCGCGCTGGAGTGGCCCGAGCATGGGCCTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGtt < 4:258338/148‑1 (MQ=255) gcgcTGGAGCGGCCCGAGCATGGGCCTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACGt < 6:118308/149‑1 (MQ=255) ccGAGCATGGGCCTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACGTGG‑‑ATGACCTGGCg > 7:128992/1‑149 (MQ=255) cGAGCATGGGCCTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCt > 8:196173/1‑108 (MQ=255) cGAGCATGGGCCTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCt < 7:196173/108‑1 (MQ=255) cTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACAccc < 6:413992/109‑1 (MQ=255) cTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACAccc > 5:413992/1‑109 (MQ=255) cTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACGTGG‑‑ATGACCTGGCGTTCAGCTCCGAg < 3:221067/149‑1 (MQ=255) ttATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGc < 5:332220/99‑1 (MQ=255) ttATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGc > 6:332220/1‑99 (MQ=255) tgtgtgCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACGTGG‑‑ATGACCTGGCGTTCAGCTCCGAgctgc < 1:272882/149‑1 (MQ=255) tgtgtgCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACGTGG‑‑ATGACCTGGCGTTCAGCTCCGAgctg < 4:320964/148‑1 (MQ=255) tgtgCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACGTGG‑‑ATGACCTGGCGTTCAGCTCGGAgctgaac > 2:203937/1‑146 (MQ=255) gtgCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACGTgg < 2:5282/119‑1 (MQ=255) gtgCTGCAAGCTGTGCGACTACCGCCGGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACGTgg > 1:5282/1‑119 (MQ=255) ctgcAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACGTGG‑‑At < 4:142560/118‑1 (MQ=255) ctgcAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACGTGG‑‑At > 3:142560/1‑118 (MQ=255) ctgcAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACGTGG‑‑ATGACCTGGCGTTCAGCTCGGAgctgaacgcca < 1:203937/149‑8 (MQ=255) aaGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACGTGG‑‑ATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGc > 5:199633/1‑149 (MQ=255) tgCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACGTGG‑‑ATGACCTGGCGTTCAGCTcc < 5:361725/126‑1 (MQ=255) tgCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACGTGG‑‑ATGACCTGGCGTTCAGCTcc > 6:361725/1‑126 (MQ=255) tgCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACGTGG‑‑ATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAAcc < 6:358226/148‑1 (MQ=255) gACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACGTGG‑‑ATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGAt > 7:271572/1‑149 (MQ=255) aCTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACGTGG‑‑ATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGATc < 8:128992/149‑1 (MQ=255) cTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACGTGG‑‑ATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGATc < 8:271572/148‑1 (MQ=255) tatATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACGTGG‑‑ATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGATCCCCAACGCTAGCGca > 2:378772/3‑149 (MQ=255) tGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACGTGG‑‑ATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGATCCCCAACGCTAgcgc > 7:87433/1‑148 (MQ=255) ccACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACGTGG‑‑ATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGATCCCCAACGCTAGCGCACATTTg > 1:84724/1‑149 (MQ=255) ccAGGGCTACCTGGACAGCCACGCGCCGATACGCCAGGTGACGGAACACGCCAAACAACCCTTCATCACTTACGTGG‑‑ATGACCTGGCTATCACCTCCGAGCAGCTGAACCTGGCAAACCTGATCCCCAACGCTAACGCACATTTGCGCa > 3:358131/1‑149 (MQ=255) tACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACGTGG‑‑ATGACCTGGCGTTCAGCTCCGAgct > 7:8473/1‑95 (MQ=255) tACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACGTGG‑‑ATGACCTGGCGTTCAGCTCCGAgct < 8:8473/95‑1 (MQ=255) aCCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACGTGG‑‑ATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGATCCCCAACGCTAGCGCACATTTGCGCAGTACCAGc > 4:146479/1‑149 (MQ=255) ccTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAATCACCCCTTCATCAGTTACGTGG‑‑ATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGATCCCCAACGCTAGCGCACATTTGCGCAGTACCAGc < 5:305033/148‑1 (MQ=255) ccTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACGTGG‑‑ATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGATCCCCAACGCTAGCGCACATTTGCGCAGTACCAGc < 3:380652/148‑1 (MQ=255) ccTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACGTGG‑‑ATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGATCCCCAACGCTAGCGCACATTTGCGCAGTACCAGc < 2:84724/148‑1 (MQ=255) gACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACGTGG‑‑ATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGATCCCCAACGCTAGCGCACATTTGCGCAGTACCAGCGTGAt > 6:391370/1‑149 (MQ=255) cAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACGTGG‑‑ATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGATccc < 4:8261/111‑1 (MQ=255) cAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACGTGG‑‑ATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGATccc > 3:8261/1‑111 (MQ=255) ccACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACGTGG‑‑ATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGATCCCCAACGCTAGCGCACATTTGCGCAGTACCAGCGTGATcgcg > 6:379334/1‑148 (MQ=255) cACGCGGCGTTGCGCCTGGTGAGGGATCTGGCCAAAGACCACTTCTTCAGTTACGTGG‑‑ATGACCTGGAGTTTTGGTAGTAGCTTCTGTACCTGGCCAACCTGATCCCCAACGCTAGCGCAGATTTGCGCAGTACCAGCGTGATAGCGCa < 4:358131/149‑1 (MQ=255) cACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACGTGG‑‑ATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGATCCCCAACGCTAGCGCACATTTGCGCAGTACCAGCGTGATcgcg > 2:134312/1‑147 (MQ=255) cACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACGTGG‑‑ATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGATCCCCAACGCTAGCGCACATTTGCGCAGTACCAGCGTGATCGCGCa < 1:378772/149‑1 (MQ=255) gcgcCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACGTGG‑‑ATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTgg > 6:16574/1‑91 (MQ=255) gcgcCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACGTGG‑‑ATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTgg < 5:16574/91‑1 (MQ=255) ccagATCCGTCACCTGGCGGATCTGGCCAAACACCCCTTCATCAGTTACGTGG‑‑ATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGATCCCCAACGCTAGCGCACATTTGCGCAGTACCa > 8:527/4‑131 (MQ=255) ccagATCCGTCACCTGGCGGATCTGGCCAAACACCCCTTCATCAGTTACGTGG‑‑ATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGATCCCCAACGCTAGCGCACATTTGCGCAGTACCa < 7:527/128‑1 (MQ=255) ccagATCCGTCACCTGGCGGATCTGGCCAAACACCCCTTCATCAGTTACGTGG‑‑ATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGATCCCCAACGCTAGCGCACATTTGCGCAGTACCAGCGTGATCGCGCa > 6:301093/4‑144 (MQ=255) ccagATCCGTCACCTGGCGGATCTGGCCAAACACCCCTTCATCAGTTACGTGG‑‑ATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGATCCCCAACGCTAGCGCACATTTGCGCAGTACCAGCGTGATCGCGCa < 5:301093/141‑1 (MQ=255) ccagATCCGTCACCTGGCGGATCTGGCCAAACACCCCTTCATCAGTTACGTGG‑‑ATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGATCCCCAACGCTAGCGCACATTTGCGCAGTACCAGCGTGATCGCGCAGTaca > 8:150459/4‑149 (MQ=255) ccagATCCGTCACCTGGCGGATCTGGCCAAACACCCCTTCATCAGTTACGTGG‑‑ATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGATCCCCAACGCTAGCGCACATTTGCGCAGTACCAGCGTGATCGCGCAGTaca > 4:237339/4‑149 (MQ=255) tGACGGATCTGGCCAAACACCCCTTCATCAGTTACGTGG‑‑ATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGATCCCCAACGCTAGCGCACATTTGCGCAGTACCAGCGTGATCGCGCAGTACACGGCAGCGCTGCAg < 6:199633/149‑1 (MQ=255) gACGGATCTGGCCAAACACCCCTTCATCAGTTACGTGGTAATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGATCCCCAACGCTAgcgc < 1:322770/101‑1 (MQ=255) | GCCTGTCCAAGCGTGAGGCGGACATCGTCATCGCGCTGGAGCGGCCCGAGCATGGGCCTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACGTGG‑‑ATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGATCCCCAACGCTAGCGCACATTTGCGCAGTACCAGCGTGATCGCGCAGTACACGGCAGCGCTGCAG > NC_002947/5294946‑5295238 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |