| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,322,834 | A→C | 5.4% | S140A (TCC→GCC) | mrcB ← | transglycosylase/transpeptidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,322,834 | 0 | A | C | 5.4% | 301.7 / 7.0 | 93 | S140A (TCC→GCC) | mrcB | transglycosylase/transpeptidase |
| Reads supporting (aligned to +/- strand): ref base A (44/44); new base C (3/2); total (47/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.25e-01 | |||||||||||
CGTTGCCACCAAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCGTAGAACTGGAAGCCACGGGTATTGAGGTCGACGGTATTGCCGTTGACGGACGCAGCGCCCGGGCCGTTGGCCGCGCTTTCG > NC_002947/5322691‑5322979 | cGTTGCCACCAAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAg < 3:152040/147‑1 (MQ=255)cGTTGCCACCAAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGCCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAgg < 3:326401/148‑1 (MQ=255) accaAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAAc > 3:15936/1‑149 (MQ=255) ccaAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACg > 6:305767/1‑149 (MQ=255) caAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACg > 7:146884/1‑148 (MQ=255) tttCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCg > 6:20117/1‑149 (MQ=255) gCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGc > 5:326016/1‑144 (MQ=255) gCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGc < 6:326016/144‑1 (MQ=255) tatTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAgcg < 5:20117/149‑1 (MQ=255) atTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGccc < 8:253992/125‑1 (MQ=255) tttGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCa > 4:196285/1‑149 (MQ=255) tttGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCAGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAgcgc < 6:280679/148‑1 (MQ=255) ggTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCag < 5:45183/136‑1 (MQ=255) ggTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCAcgc < 6:307050/148‑1 (MQ=255) ggTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACCTAAACGCCac > 6:45183/1‑135 (MQ=255) gTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCAcg > 8:201979/1‑146 (MQ=255) gTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCAcg < 7:201979/146‑1 (MQ=255) tACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGa > 1:193788/1‑149 (MQ=255) aCCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGAc > 1:147631/1‑149 (MQ=255) aCCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGAc > 5:47236/1‑149 (MQ=255) cTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACg > 1:292047/1‑148 (MQ=255) tcgatcTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTTCCGGTGCCAACGGCAAg > 8:183368/1‑107 (MQ=255) tcgatcTTGATCAGGATGCGCTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTTCCGGTGCCAACGGCAAg < 7:183368/107‑1 (MQ=255) tcTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGcc > 3:344256/1‑149 (MQ=255) ttGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCgg > 3:298053/1‑149 (MQ=255) gATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGtt > 3:21471/1‑149 (MQ=255) aTCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGtt < 4:298053/148‑1 (MQ=255) tCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTTCCGGTGCCAACGGCAAGGcgc > 4:353000/1‑99 (MQ=38) cAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCa > 2:91877/1‑149 (MQ=255) cAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCa > 7:306667/1‑149 (MQ=255) aGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCa < 1:293677/148‑1 (MQ=255) aGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCAt < 4:15936/149‑1 (MQ=255) ggTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCg > 3:79608/1‑149 (MQ=255) ttCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCGTAg > 8:272449/1‑148 (MQ=255) ttCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCGTAg > 7:275227/1‑148 (MQ=255) cGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCGTAGaa < 3:8385/148‑1 (MQ=255) agaTTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCGTAGAACTg > 6:100102/1‑149 (MQ=255) agaTTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCGTAGAACTg < 2:292047/149‑1 (MQ=255) gaTTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCGTAGAACTgg < 7:272449/149‑1 (MQ=255) tttttCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCGTAGAACTGGaa < 3:68030/149‑1 (MQ=255) gggTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGATCCATGCCCTCGTAGAACTGGAAGCCCCg > 4:296330/1‑149 (MQ=255) ggTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCGTAGAACTGGAAGCCACgg < 6:47236/149‑1 (MQ=255) ggTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCGTAGAACTGGAAGCCACgg < 5:100102/149‑1 (MQ=255) ggTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCGTAGAACTGGAAGCCACgg < 8:275227/149‑1 (MQ=255) ggTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCGTAGAACTGGAAGCCACgg < 2:147631/149‑1 (MQ=255) gTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCGTAGAACTGGAAGCCACggg > 8:329285/1‑149 (MQ=255) aGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGATAGGCCCGCAACGTAATCGCCAGAGAAGCGCGCGCGGCCGTACTGCGCCGGTTCCATGCCCTCGTAGAACTGGAAGCCACGGGTa > 5:394436/1‑149 (MQ=255) tGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCATCGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCGTAGAACTGGAAGCCACGGGTAtt < 8:146884/148‑1 (MQ=255) gccgccGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTc < 5:78389/123‑1 (MQ=255) gccgccGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTc > 6:78389/1‑123 (MQ=255) ccgATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCGTAGAACTGGAAGCCACGGGTATTGAGGt > 4:225015/1‑148 (MQ=255) ccgATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCGTAGAACTGGAAGCCACGGGTATTGAGGt < 3:225015/148‑1 (MQ=255) tcatcaGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCGTAGAACTGGAAGCCACGGGTATTGAGGTCGACg > 4:345139/1‑149 (MQ=255) atcaGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCGTAGAACTGGAAGCCACGGGTATTGAg < 2:385358/140‑1 (MQ=255) atcaGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCGTAGAACTGGAAGCCACGGGTATTGAg > 1:385358/1‑140 (MQ=255) atcaGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCGTAGAACTGGAAGCCACGGGTATTGAGGTCGACgg > 8:78626/1‑148 (MQ=255) tcaGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCGTAGAACTGGAAGCCACGGGTATTGAGGTCGACGGTa > 5:121255/1‑149 (MQ=255) caGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTg < 2:32590/93‑1 (MQ=255) caGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTg > 1:32590/1‑93 (MQ=255) aGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCGTAGAACTGGAAGCCACGGGTATTGAGGTCGACGGTAtt < 7:329285/149‑1 (MQ=255) gCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCGTAGAACTGGAAGCCACGGGTATTGAGGTCGACGGTATTg < 5:305767/149‑1 (MQ=255) gCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCGTAGAACTGGAAGCCACGGGTATTGAGGTCGACGGTATTg > 1:305486/1‑149 (MQ=255) gCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCGTAGAACTGGAAGCCACGGGTATTGAGGTCGACGGTATTg < 8:306667/149‑1 (MQ=255) gCGGATCCAGCCGCACCACGTCAAGGGCCTTGCCGTTTGCACCGGAAATGCCCGCAACTTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGTCGGTTCCATGCCCTCGTAGAACTGGAAGCCACGGGTATTGAGGTCGACGGTATTg < 5:395351/149‑1 (MQ=255) ggCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCGTAGAACTGGAAGCCACGGGTATTGAGGTCGACGGTATTGcc < 3:196285/149‑1 (MQ=255) tCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCGTAGAACTGGAAGCCACGGGTATTGAGGTCGACGGTATTGCCGtt < 5:138902/149‑1 (MQ=255) ccAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGACAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCGTAGAACTGGAAGCCACGGGTATTGAGGTCGACGGTATTGCCGtt > 6:17944/1‑148 (MQ=255) cAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCGTAGAACTGGAAGCCACGGGTATTGAGGTCGACGGTATTGCCGtt < 3:345139/147‑1 (MQ=255) aGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCGTAGAACTg < 3:49694/110‑1 (MQ=255) aGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCGTAGAACTg > 4:49694/1‑110 (MQ=255) aGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCGTAGAACTGGAAGCCACGGGTATTGAGGTCGACGGTATTGCCGTTgac < 2:305486/149‑1 (MQ=255) gCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCGTAGAACTGGAAGCCACGGGTATTGa > 1:184235/1‑126 (MQ=255) gCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCGTAGAACTGGAAGCCACGGGTATTGa < 2:184235/126‑1 (MQ=255) gCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCGTAGAACTGGAAGCCACGGGTATTGAGGTCGACGGTATTGCCGTTgacg < 5:17944/149‑1 (MQ=255) accacGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCGTAGAACTGGAAGCCACg > 4:28694/1‑113 (MQ=255) accacGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCGTAGAACTGGAAGCCACg < 3:28694/113‑1 (MQ=255) cacGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCGTAGAACTGGAAGCCACGGGTATTGAGGTCGACGGTATTGCCGTTGACGGACGCAg > 2:287303/1‑149 (MQ=255) acGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCGTAGAACTGGAAGCCACGGGTATTGAGGTCGACGGTATTGCCGTTGACGGACGCAgc > 8:46226/1‑149 (MQ=255) gTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCGTAGAACTGGAAGCCACGGGTATTGAGGTCGACGGTATTGCCGTTGACGGACGCAgcgc > 8:25170/1‑149 (MQ=255) aGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCGTAGAACTGGAAGCCACGGGTATTGAGGTCGACGGTATTGCCGTTGACGGACGCAGCGCCCgg < 4:79608/149‑1 (MQ=255) gcgcCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCGTAGAACTGGAAGCCACGGGTATTGAGGTCGACGGTATTGCCGTTGACGGACGCAGCGCCCggg > 7:104719/1‑149 (MQ=255) ccTTTCCGGTGCCAACGGCAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCGTAGAACTGGAAGCCACGGGTATTGAGGTCGACGGTATTGCCGTTGACGGACGCAGCGCCCGGGCCg > 5:241989/1‑149 (MQ=255) cTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCGTAGAACTGGAAGCCACGGGTATTGAGGTCGACGGTATTGCCGTTGACGGACGCAGCGCCCGGGCCGt < 1:91877/149‑1 (MQ=255) gTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCGTAGAACTGGAAGCCACGGGTATTGAGGTCGACGGTATTGCCGTTGACGGACGCAGCGCCCGGGCCGTTGGCcg < 8:104719/149‑1 (MQ=255) ttGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCGTAGAACTGGAAGCCACGGGTATTGAGGTCGACGGTATTGCCGTTGACGGACGCAg < 6:66020/130‑1 (MQ=255) ttGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCGTAGAACTGGAAGCCACGGGTATTGAGGTCGACGGTATTGCCGTTGACGGACGCAg > 5:66020/1‑130 (MQ=255) cACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCGTAGAACTGGAAGCCACGGGTATTGAGGTCGACGGTATTGCCGTTGACGGACGCAGCGCCCGGGCCGTTGGCCGCGCtt < 2:193788/149‑1 (MQ=255) aCCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCGTAGAACTGGAAGCCACGGGTATTGAGGTCGACGGTATTGCCGTTGACGGACGCAGCGCCCGGGCCGtt < 4:102658/138‑1 (MQ=255) aCCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCGTAGAACTGGAAGCCACGGGTATTGAGGTCGACGGTATTGCCGTTGACGGACGCAGCGCCCGGGCCGtt > 3:102658/1‑138 (MQ=255) aCCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCGTAGAACTGGAAGCCACGGGTATTGAGGTCGACGGTATTGCCGTTGACGGACGCAGCGCCCGGGCCGTTGGCCGCGCttt > 2:373942/1‑149 (MQ=255) ccGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCGTAGAACTGGAAGCCACGGGTATTGAGGTCGACGGTATTGCCGTTGACGGACGCAGCGCCCGGGCCGTTGGCCGCGCTTTc < 7:46226/149‑1 (MQ=255) cGGCAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCGTAGAACTGGAAGCCACGGGTATTGAGGTCGACGGTATTGCCGTTGACGGACGCAGCGCCCGGGCCGTTGGCCGCGCTTTcg < 6:241989/149‑1 (MQ=255) cGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCGTAGAACTGGAAGCCACGGGTATTGAGGTCGACGGTATTGCCGTTGACGGACGCAGCGCCCGGGCCGTTGGCCGCGCTTTcg > 4:105661/1‑149 (MQ=255) aaaGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCGTAGAACTGGAAGCCACGGGTATTGAGGTCGACGGTATTGCCGTTGACGGACGCAGCGCCCGGGCCGtt < 3:351354/133‑1 (MQ=255) aaaGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCGTAGAACTGGAAGCCACGGGTATTGAGGTCGACGGTATTGCCGTTGACGGACGCAGCGCCCGGGCCGtt > 4:351354/1‑133 (MQ=255) | CGTTGCCACCAAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGCCGGTTCCATGCCCTCGTAGAACTGGAAGCCACGGGTATTGAGGTCGACGGTATTGCCGTTGACGGACGCAGCGCCCGGGCCGTTGGCCGCGCTTTCG > NC_002947/5322691‑5322979 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |