| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,378,260 | A→T | 5.3% | intergenic (‑37/‑156) | grpE ← / → recN | heat shock protein GrpE/DNA repair/recombination protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,378,260 | 0 | A | T | 5.3% | 236.0 / 2.3 | 76 | intergenic (‑37/‑156) | grpE/recN | heat shock protein GrpE/DNA repair/recombination protein |
| Reads supporting (aligned to +/- strand): ref base A (38/34); new base T (2/2); total (40/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.61e-01 | |||||||||||
GGCCAGCTGTTCCTCGAGCTCCAGAACACGGGTATCAGCTGCATTGCCTGCACCGGTTTCTTCCA‑‑CGTTA‑‑‑‑‑‑‑AGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCT‑CCTGCGCAATT‑TTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAGGCCTGAAAAAAGTACTGTATAAATAACCAGACCTGATTTCCGGGA > NC_002947/5378122‑5378406 | ggCCAGCTGTTCCTCGAGCTCCAGAACACGGGTATCAGCTGCATTGCCTGCACCGGTTTCTTCCA‑‑CGTTA‑‑‑‑‑‑‑AGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCT‑CCTGCGCAATT‑TTGTGGACTGCGAGCCAGGCTCGCCtt > 3:388749/1‑149 (MQ=255) ccAGCTGTTCCTCGAGCTCCAGAACACGGGTATCAGCTGCATTGCCTGCACCGGTTTCTTCCA‑‑CGTTA‑‑‑‑‑‑‑AGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCTCCCTGCGCAATT‑TTGTGGACTGCGAGCCTGGCTCGcagtc < 1:73379/149‑5 (MQ=255) ccAGCTGTTCCTCGAGCTCCAGAACACGGGTATCAGCTGCATTGCCTGCACCGGTTTCTTCCA‑‑CGTTA‑‑‑‑‑‑‑AGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCT‑CCTGCGCAATTCTTGTGGACTGCGAGCCAGGCTCGCCTTg < 1:24651/149‑1 (MQ=255) gCTGTTCCTCGAGCTCCAGAAGACGTGTATCAGCTGCATATCATGCACCTGTTTCTCACACTCACTACCCCNCCAGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCT‑CCTGCGCAATT‑TTGTGGACTGCGAGCCTGGCTCg < 1:131590/149‑1 (MQ=255) ttCCTCGAGCTCCAGAACACGGGTATCAGCTGCATTGCCTGCACCGGTTTCTTCCA‑‑CGTTA‑‑‑‑‑‑‑AGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCT‑CCTGCGCAATT‑TTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTc < 2:113003/147‑1 (MQ=255) cTCGAGCTCCAGAACACGGGTATCAGCTGCATTGCCTGCACCGGTTTCTTCCA‑‑CGTTA‑‑‑‑‑‑‑AGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCT‑CCTGCGCAATT‑TTGTGGACTGCGAGCCAGGCTCGCCTTg < 6:358848/138‑1 (MQ=255) cTCGAGCTCCAGAACACGGGTATCAGCTGCATTGCCTGCACCGGTTTCTTCCA‑‑CGTTA‑‑‑‑‑‑‑AGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCT‑CCTGCGCAATT‑TTGTGGACTGCGAGCCAGGCTCGCCTTg > 5:358848/1‑138 (MQ=255) cTCGAGCTCCAGAACACGGGTATCAGCTGCATTGCCTGCACCGGTTTCTTCCA‑‑CGTTA‑‑‑‑‑‑‑AGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCT‑CCTGCGCAATT‑TTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCg > 7:240027/1‑145 (MQ=255) cTCGAGCTCCAGAACACGGGTATCAGCTGCATTGCCTGCACCGGTTTCTTCCA‑‑CGTTA‑‑‑‑‑‑‑AGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCT‑CCTGCGCAATT‑TTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCg < 8:240027/145‑1 (MQ=255) tCGAGCTCCAGAACACGGGTATCAGCTGCATTGCCTGCACCGGTTTCTTCCA‑‑CGTTA‑‑‑‑‑‑‑AGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCT‑CCTGCGCAATT‑TTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCta > 2:202408/1‑148 (MQ=255) tCCAGAACACGGGTATCAGCTGCATTGCCTGCACCGGTTTCTTCCA‑‑CGTTA‑‑‑‑‑‑‑AGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCT‑CCTGCGCAATT‑TTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATgggg > 4:332329/1‑149 (MQ=255) ccAGAACACGGGTATCAGCTGCATTGCCTGCACCGGTTTCTTCCA‑‑CGTTA‑‑‑‑‑‑‑AGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCT‑CCTGCGCAATT‑TTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATTGGGc > 5:365609/1‑149 (MQ=255) cAGAACACGGGTATCAGCTGCATTGCCTGCACCGGTTTCTTCCA‑‑CGTTA‑‑‑‑‑‑‑AGGTCTTTCACGTTCAGCTGCTCATCAGCCATGGGGTCTCT‑CCTGCGCAATT‑TTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGcc > 1:113258/1‑149 (MQ=255) gTATCAGCTGCATTGCCTGCACCGGTTTCTTCCA‑‑CGTTA‑‑‑‑‑‑‑AGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCT‑CCTGCGCAATT‑TTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAAc > 2:191786/1‑147 (MQ=255) gTATCAGCTGCATTGCCTGCACCGGTTTCTTCCA‑‑CGTTA‑‑‑‑‑‑‑AGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCT‑CCTGCGCAATT‑TTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCa < 3:135977/149‑1 (MQ=255) aGCTGCATTGCCTGCACCGGTTTCTTCCA‑‑CGTTA‑‑‑‑‑‑‑AGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCT‑CCTGCGCAATT‑TTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGtt > 7:103170/1‑148 (MQ=255) cTGCATTGCCTGCACCGGTTTCTTCCA‑‑CGTTA‑‑‑‑‑‑‑AGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCT‑CCTGCGCAATT‑TTGTGGACTGCGAGCCAGGCTCGCCTTgg < 5:420702/113‑1 (MQ=255) cTGCATTGCCTGCACCGGTTTCTTCCA‑‑CGTTA‑‑‑‑‑‑‑AGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCT‑CCTGCGCAATT‑TTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTc > 1:105737/1‑147 (MQ=255) cTGCATTGCCTGCACCGGTTTCTTCCA‑‑CGTTA‑‑‑‑‑‑‑AGGTCTTTCTCGTTCAGCTGCTCATAAGCCATGGGGTCTCT‑CCTGCGCAATT‑TTGTGGACTGCGAGCCAGGCTCGCCTTgg > 6:420702/1‑113 (MQ=255) cATTGCCTGCACCGGTTTCTTCCA‑‑CGTTA‑‑‑‑‑‑‑AGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCT‑CCTGCGCAATT‑TTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAgg < 7:371989/148‑1 (MQ=255) cATTGCCTGCACCGGTTTCTTCCA‑‑CGTTA‑‑‑‑‑‑‑AGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCT‑CCTGCGCAATT‑TTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAg < 2:105737/147‑1 (MQ=255) cTGCACCTGTTTCTTCCA‑‑CGTTA‑‑‑‑‑‑‑AGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCT‑CCTGCGCAATT‑TTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAgg < 5:344497/149‑1 (MQ=255) cTGCACCGGTTTCTTCCA‑‑CGTTA‑‑‑‑‑‑‑AGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCT‑CCTGCGCAATT‑TTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAgg > 4:327412/1‑149 (MQ=255) gTTTCTTCCA‑‑CGTTA‑‑‑‑‑‑‑AGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCT‑CCTGCGCAATT‑TTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGtttt > 4:345039/1‑148 (MQ=255) tcttcCA‑‑CGTTA‑‑‑‑‑‑‑AGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCT‑CCTGCGCAATT‑TTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCaa < 4:388749/148‑1 (MQ=255) ccA‑‑CGTTA‑‑‑‑‑‑‑AGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCT‑CCTGCGCAATT‑TTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACt < 1:191786/148‑1 (MQ=255) a‑‑CGTTA‑‑‑‑‑‑‑AGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCT‑CCTGCGCAATT‑TTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACt > 6:204409/1‑146 (MQ=255) a‑‑CGTTA‑‑‑‑‑‑‑AGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCT‑CCTGCGCAATT‑TTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACt < 5:204409/146‑1 (MQ=255) cGTTA‑‑‑‑‑‑‑AGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCT‑CCTGCGCAATT‑TTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCaa < 8:103170/149‑1 (MQ=255) tttCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCT‑CCTGCGCAATT‑TTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGc > 6:52459/1‑149 (MQ=255) tctcGTTCAGCTGCTCATCAGCCATGGGGTCTCT‑CCTGCGCAATT‑TTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGc < 3:345039/147‑1 (MQ=255) ctcGTTCAGCTGCTCATCAGCCATGGGGTCTCT‑CCTGCGCAATT‑TTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCaa < 5:85690/128‑1 (MQ=255) ctcGTTCAGCTGCTCATCAGCCATGGGGTCTCT‑CCTGCGCAATT‑TTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCaa > 6:85690/1‑128 (MQ=255) ctcGTTCAGCTGCTCATCAGCCATGGGGTCTCT‑CCTGCGCAATT‑TTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCg > 5:190767/1‑147 (MQ=255) gTTCAGCTGCTCATCAGCCATGGGGTCTCT‑CCTGCGCAATT‑TTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACa > 2:16576/1‑135 (MQ=255) gTTCAGCTGCTCATCAGCCATGGGGTCTCT‑CCTGCGCAATT‑TTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACa < 1:16576/135‑1 (MQ=255) gTTCAGCTGCTCATCAGCCATGGGGTCTCT‑CCTGCGCAATT‑TTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAggg < 1:202408/149‑1 (MQ=255) gTTCAGCTGCTCATCAGCCATGGGGTCTCT‑CCTGCGCAATT‑TTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAggg < 6:190767/149‑1 (MQ=255) gTTCAGCTGCTCATCAGCCATGGGGTCTCT‑CCTGCGCAATT‑TTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAggg < 3:332329/149‑1 (MQ=255) aGCTGCTCATCAGCCATGGGGTCTCT‑CCTGCGCAATT‑TTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAgg < 2:399040/97‑1 (MQ=255) ctgctCATCAGCCATGGGGTCTCT‑CCTGCGCAATT‑TTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTg > 4:376385/1‑149 (MQ=255) ctgctCATCAGCCATGGGGTCTCT‑CCTGCGCAATT‑TTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTg > 3:399238/1‑149 (MQ=255) ctCATCAGCCATGGGGTCTCT‑CCTGCGCAATT‑TTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGc < 3:376385/148‑1 (MQ=255) atcaGCCATGGGGTCTCT‑CCTGCGCAATT‑TTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAgg > 6:228593/1‑148 (MQ=255) atcaGCCATGGGGTCTCT‑CCTGCGCAATT‑TTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAGGc > 5:263906/1‑149 (MQ=255) atcaGCCATGGGGTCTCT‑CCTGCGCAATT‑TTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGGTCAAGGGGCAAGGTAGTTTTCAAGACTGCAAAATAATATGCGAAGGGGCATTGGCAGGc > 7:187683/1‑149 (MQ=255) cATGGGGTCTCT‑CCTGCGCAATT‑TTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAGGCCTGaa < 6:365609/148‑1 (MQ=255) aTGGGGTCTCT‑CCTGCGCAATT‑TTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGTCTATATGGGGCCGGAAAAACCAGGTTCAAgg < 7:359773/89‑1 (MQ=255) aTGGGGTCTCT‑CCTGCGCAATT‑TTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAgg > 8:359773/1‑89 (MQ=255) aTGGGGTCTCT‑CCTGAGCAATT‑TTGAGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAGGCCTGaaa > 2:336412/1‑148 (MQ=255) gggTCTCT‑CCTGCGCAATT‑TTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAGGCCTGaaaaaa < 5:52459/148‑1 (MQ=255) gggTCTCT‑CCTGCGCAATT‑TTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAGGCCTGaaaaaa < 3:327412/148‑1 (MQ=255) tct‑cCTGCGCAATT‑TTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAGGCCTGAAAAAAGTACTg > 8:116292/1‑149 (MQ=255) t‑cCTGCGCAATT‑TTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAGGCCTGAAAAAAGTACTGta > 3:263494/1‑149 (MQ=255) cgcAATT‑TTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAGGCCTGaaaa > 6:112041/1‑134 (MQ=255) cgcAATT‑TTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAGGCCTGaaaa < 5:112041/134‑1 (MQ=255) gcAATT‑TTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAGGCCTGAAAAAAGTACTGTataaat > 3:331356/1‑148 (MQ=255) aaTT‑TTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAGGCCTGAAAAAAGTACTGTATAAATAAc < 2:113258/149‑1 (MQ=255) tt‑ttGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCCATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAGGCCTGAAAAAAGTACTGTataaa > 1:157456/1‑143 (MQ=255) tt‑ttGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCCATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAGGCCTGAAAAAAGTACTGTataaa < 2:157456/143‑1 (MQ=255) aaggCGAGCCTGGCTCGCCTTGGATGTCGGCTATATGGCGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAGGCCTGAAAAAAGTACTGTATAAATAACCa > 7:37234/4‑141 (MQ=255) aggCGAGCCTGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCATGGGGGAAGGGAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCAATGGCATGCCTGAAAAAAGTTCTGTATAAATAAACAGACGTGAtt > 5:246608/3‑149 (MQ=255) tGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAGGCCTGAAAAAAGTACTGTATAAATAACGAGCCCTGAttt > 6:215226/1‑149 (MQ=255) tGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAGGCCTGAAAAAAGTACTGTATAAATAACCAGACCTGAttt > 6:318237/1‑149 (MQ=255) tGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAGGCCTGAAAAAAGTACTGTATAAATAACCAGACCTGAttt > 5:23872/1‑149 (MQ=255) cGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAGGCCTGaaaaaa < 1:361877/119‑1 (MQ=255) cGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAGGCCTGaaaaaa > 2:361877/1‑119 (MQ=255) gAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAGGCCTGaaaaaa < 2:396190/118‑1 (MQ=255) gAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAGGCCTGaaaaaa > 1:396190/1‑118 (MQ=255) gAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAGGCCTGaaaa < 3:210153/116‑1 (MQ=255) gAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAGGCCTGaaaa > 4:210153/1‑116 (MQ=255) gAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAGGCCTGAAAAAAGTACTGTATAAATAACCAGACCTGATTTCCg < 7:116292/149‑1 (MQ=255) gCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAGGCCTGAAAAAAGTACTGTATAAATAACCAGACCTGATTTCCggg > 8:210291/1‑149 (MQ=255) gCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAGGCCTGAAAAAAGTACTGTATAAATAACCAGACCTGATTTCCgg > 6:173305/1‑148 (MQ=255) ccAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAGGCCTGAAAAAAGTACTGTATAAATAACCAGACCTGATTTCCGGGa < 4:331356/149‑1 (MQ=255) ccAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAGGCCTGAAAAAAGTACTGTATAAATAACCAGACCTGATTTCCGGGa < 4:399238/149‑1 (MQ=255) | GGCCAGCTGTTCCTCGAGCTCCAGAACACGGGTATCAGCTGCATTGCCTGCACCGGTTTCTTCCA‑‑CGTTA‑‑‑‑‑‑‑AGGTCTTTCTCGTTCAGCTGCTCATCAGCCATGGGGTCTCT‑CCTGCGCAATT‑TTGTGGACTGCGAGCCAGGCTCGCCTTGGATGTCGGCTATATGGGGCCGGAAAAACCAGGTTCAAGGGGCAAGGTAGTTTTCAAGACTGCAACATAATCTGCGAAGGGGCATTGGCAGGCCTGAAAAAAGTACTGTATAAATAACCAGACCTGATTTCCGGGA > NC_002947/5378122‑5378406 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |