| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,378,883 | C→G | 5.2% | A156A (GCC→GCG) | recN → | DNA repair/recombination protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,378,883 | 0 | C | G | 5.2% | 318.8 / 6.1 | 97 | A156A (GCC→GCG) | recN | DNA repair/recombination protein |
| Reads supporting (aligned to +/- strand): ref base C (53/39); new base G (3/2); total (56/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.98e-01 | |||||||||||
GGCACGCCCTGCCCGCTCGGCGACCTCAAGGCGCTGGGCGAACTGCTGATCGATATCCACAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGCTGGAAGAACTGGACAACCTCGGCCTGGGCGAGCAC > NC_002947/5378740‑5379030 | ggCACGCCCTGCCCGCTCGGCGACCTCAAGGCGCTGGGCGAACTGCTGATCGATATCCACAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGc > 3:95376/1‑147 (MQ=255)ggCACGCCCTGCCCGCTCGGCGACCTCAAGGCGCTGGGCGAACTGCTGATCGATATCCACAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCa < 7:84201/149‑1 (MQ=255) cGCCCTGCCCGCTCGGCGACCTCAAGGCGCTGGGCGAACTGCTGATCGATATCCACAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTa > 6:125409/1‑149 (MQ=255) gCCCTGCCCGCTCGGCGACCTCAAGGCGCTGGGCGAACTGCTGATCGATATCCACAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTa > 6:163425/1‑148 (MQ=255) cccTGCCCGCTCGGCGACCTCAAGGCGCTGGGCGAACTGCTGATCGATATCCACAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCGGGCCAGGtcga < 1:34226/149‑4 (MQ=255) ccGCTCGGCGACCTCAAGGCGCTGGGCGAACTGCTGATCGATATCCACAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTg > 2:103239/1‑148 (MQ=255) aCCTCAAGGCGCTGGGCGAACTGCTGATCGATATCCACAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCAGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGc < 6:175079/139‑1 (MQ=255) aCCTCAAGGCGCTGGGCGAACTGCTGATCGATATCCACAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCAGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGc > 5:175079/1‑139 (MQ=255) aaGGCGCTGGGCGAACTGCTGATCGATATCCACAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACACACCGTCGCCTGCTTGACGAGTATGACTGCGCCGTCGACCTGGCCCGCCACGTACAGCTTGCAGCCAAGC‑GCTGGa > 3:256750/1‑148 (MQ=255) ctgctgATCGATATCCACAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCctgga < 4:95376/149‑1 (MQ=255) ctgATCGATATCCACAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCctggagct > 3:403929/1‑149 (MQ=255) ctgATCGATATCCACAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCctggagct > 2:111945/1‑149 (MQ=255) aTCGATATCCACAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCctggagctg > 3:76377/1‑147 (MQ=255) atatCCATAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCTGCTGGAATCAGACCCGCctggagctg < 1:3916/144‑1 (MQ=255) atatCCATAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCctggagctg > 2:3916/1‑143 (MQ=255) atatCCACAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAgcgc > 8:273805/1‑149 (MQ=255) tatCCACAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTg < 8:245373/107‑1 (MQ=255) tatCCACAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTg > 7:245373/1‑107 (MQ=255) tCCACAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTg < 3:205578/105‑1 (MQ=255) tCCACAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTg > 4:205578/1‑105 (MQ=255) acaGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCtctc > 6:169575/1‑148 (MQ=255) gccagcACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑Ac < 5:125409/149‑1 (MQ=255) ccagcACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCctggagctggag < 8:375221/136‑1 (MQ=255) ccagcACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCctggagctggag > 7:375221/1‑136 (MQ=255) ccagcACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACt > 2:95036/1‑149 (MQ=255) ccagcACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACt > 2:227591/1‑149 (MQ=255) ccagcACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCACCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCtggagctggagc < 2:253533/137‑1 (MQ=255) ccagcACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCACCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCtggagctggagc > 1:253533/1‑137 (MQ=255) ccagcACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCCTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACt > 4:210974/1‑149 (MQ=255) gcACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCgg < 1:227591/149‑1 (MQ=255) cACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCggg < 7:21428/149‑1 (MQ=255) gAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGcga > 1:324656/1‑149 (MQ=255) aCCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGCGACGag > 6:328033/1‑149 (MQ=255) aCCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGCGACGag > 7:170243/1‑149 (MQ=255) ccAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGc < 5:423/142‑1 (MQ=255) ccAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGc > 6:423/1‑142 (MQ=255) cAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGa > 6:299076/1‑106 (MQ=255) cAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGc > 2:412078/1‑111 (MQ=255) cAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGc < 1:412078/111‑1 (MQ=255) gTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGCGACGagcagc > 5:280979/1‑149 (MQ=255) gTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGCGACGagcagc < 1:103239/149‑1 (MQ=255) tCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGCGACGAGCAgcg > 1:363937/1‑149 (MQ=255) ccTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGCGACGAGCAgcgcg > 7:202642/1‑149 (MQ=255) cTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGCGACGAGCAgcgcgc > 8:10373/1‑149 (MQ=255) cTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGAGCCTCTCCA‑ACTCGGGAGACGAGCAgcgcgc > 8:16339/1‑149 (MQ=255) tGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGcgacga > 5:35080/1‑139 (MQ=255) tGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGcgacga < 6:35080/139‑1 (MQ=255) tGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGCGACGAGCAGCGcgcc > 6:76507/1‑149 (MQ=255) gCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGCGACGAGCAGCGcgccc > 2:323392/1‑149 (MQ=255) aaGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGCGACGAGCAGCGCGCCCGcca > 1:169175/1‑149 (MQ=255) gACCGACACCCACCGTCGCCTGCCTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGCGACGAGCAGCGCGCCCGccacc < 3:210974/149‑1 (MQ=255) acccaccGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGCGACGAGCAGCGCGCCCGCCACCAgctgct > 6:227374/1‑149 (MQ=255) ccaccGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTc > 4:23919/1‑148 (MQ=255) ccaccGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTc < 3:23919/148‑1 (MQ=255) ccaccGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTAGGGCGACGAGCAGCGCGCCCGCCACCAgctgct > 5:332330/1‑147 (MQ=255) caccGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAg < 5:76507/149‑1 (MQ=255) gTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTAc < 1:95036/149‑1 (MQ=255) tCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTAcc < 5:328033/149‑1 (MQ=255) tGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGCTg > 5:62479/1‑149 (MQ=255) gCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGCTg > 3:324729/1‑148 (MQ=255) cTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGCTGga < 8:170243/149‑1 (MQ=255) ttGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGGTAACTGAGCAGCTggtg > 3:127279/1‑147 (MQ=255) ttGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGGTAACTGAGCAGCTggtg < 4:127279/149‑3 (MQ=255) ttGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCa < 6:106081/142‑1 (MQ=255) ttGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCa > 5:106081/1‑142 (MQ=255) ttGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGCTgg > 3:15473/1‑147 (MQ=255) gACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGCTGgaag > 6:336290/1‑148 (MQ=255) gACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGCTGgaac > 2:332721/1‑147 (MQ=255) gACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGCTGgaa < 6:332330/147‑1 (MQ=255) gAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGCTGGAAGAACt < 5:336290/149‑1 (MQ=255) aGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGCTGGAAGAACTg < 4:324729/149‑1 (MQ=255) aGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGCTGGAAGAACTg < 4:256750/149‑1 (MQ=255) gTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAGTCTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGCTGGAAGAACTg < 1:323392/149‑1 (MQ=255) gTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGCTGGAAGAACTgg < 7:273805/149‑1 (MQ=255) tATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGCTGGAAGAACTGGa < 2:169175/149‑1 (MQ=255) tGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGCTGGAAGAACTGGAc < 5:227374/148‑1 (MQ=255) tGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGCTGGAAGAACTGGAc < 4:76377/148‑1 (MQ=255) gCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGCTGGAAGAACTGGACaa > 2:328028/1‑149 (MQ=255) ccGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGCTGGAAGAACTGGACaa < 2:324656/148‑1 (MQ=255) ccGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGCTGGAAGAACTGGACAAc > 3:72120/1‑149 (MQ=255) cGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAgcgc < 1:210033/76‑1 (MQ=255) cGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAgcgc > 2:210033/1‑76 (MQ=255) cgcCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGCTGGAAGAACTGGACAACCTCg < 6:280979/149‑1 (MQ=255) gctgtaCCTGGCGGGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGCTGGAAGAACTGGACAACCTCGGcc > 8:338874/6‑149 (MQ=255) cGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGCTGGAAGAACTGGACAACCTCGGcc > 6:85075/1‑149 (MQ=255) ctgtaCCTGGCGGGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGCGACGAGCAGCGCGCCCGCCACCAgct > 3:346154/5‑110 (MQ=255) ctgtaCCTGGCGGGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGCGACGAGCAGCGCGCCCGCCACCAgct < 4:346154/106‑1 (MQ=255) tgtaCCTGGCGGGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGCTGGAAGAACTGGACAACCTCGGCCTg > 7:122623/4‑149 (MQ=255) tCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGCTGGAAGAACTGGACAACCTCGGCCTg > 3:374361/1‑149 (MQ=255) gACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGc > 3:221721/1‑121 (MQ=255) gACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGc < 4:221721/121‑1 (MQ=255) gACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGCTGGAAGAAc < 2:249329/130‑1 (MQ=255) gACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGCTGGAAGAAc > 1:249329/1‑130 (MQ=255) aCCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGCTGGAAGAACTGGACAACCTCGGCCTGGGc > 2:132585/1‑149 (MQ=255) aCCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGCTGGAAGAACTGGACAACCTCGGCCTGGGc > 1:155302/1‑149 (MQ=255) cTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGCTGGAAGAACTGGATAACCTCGGCCTGGGCGa < 7:10373/149‑1 (MQ=255) cTGGCCAGCCATGTACAGCTTGCAGCCAAGC‑TCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGTGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGCTGGAAGAACTGGATAACCTCGGCCGGGGCGa < 7:16339/149‑1 (MQ=255) ccGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGCTGGAAGAACTGGACAACCTCGGCCTGGGCGAGCAc > 5:386785/1‑148 (MQ=255) | GGCACGCCCTGCCCGCTCGGCGACCTCAAGGCGCTGGGCGAACTGCTGATCGATATCCACAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGC‑GCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCA‑ACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGCTGGAAGAACTGGACAACCTCGGCCTGGGCGAGCAC > NC_002947/5378740‑5379030 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |